Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 5.0e-135 484.6 266 100.0
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.4e-132 476.5 266 98.1
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 8.8e-116 420.6 264 84.5
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.7e-114 416.4 264 83.3
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.7e-114 416.4 258 86.0
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.1e-113 413.7 258 84.5
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 1.8e-113 412.9 258 84.5
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 3.1e-113 412.1 260 85.0
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.2e-112 410.2 258 84.5
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 2.0e-112 409.5 259 84.2
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 3.5e-112 408.7 258 83.7
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 3.5e-112 408.7 264 82.6
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 2.9e-111 405.6 258 82.9
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 6.5e-111 404.4 257 84.0
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 8.5e-111 404.1 258 82.9
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 1.5e-110 403.3 255 84.3
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.5e-110 403.3 259 83.0
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.9e-110 402.9 258 83.7
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 3.2e-110 402.1 258 82.9
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.2e-109 400.2 258 82.6
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 2.1e-109 399.4 258 84.1
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 2.8e-109 399.1 258 82.6
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 2.8e-109 399.1 258 81.8
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 3.6e-109 398.7 255 83.1
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 4.7e-109 398.3 257 83.3
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 6.1e-109 397.9 255 82.4
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 1.4e-108 396.7 261 82.0
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.4e-108 396.7 258 81.0
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 2.3e-108 396.0 259 81.1
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 3.0e-108 395.6 266 79.7
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 4.0e-108 395.2 258 80.6
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 6.8e-108 394.4 259 81.1
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 6.8e-108 394.4 255 82.4
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 6.8e-108 394.4 258 80.6
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 8.8e-108 394.0 259 80.7
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 8.8e-108 394.0 257 82.5
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 8.8e-108 394.0 259 80.7
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.2e-107 393.7 259 79.9
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.2e-107 393.7 259 80.3
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.0e-107 392.9 259 80.3
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.0e-107 392.9 259 81.9
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 2.0e-107 392.9 256 79.7
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.6e-107 392.5 263 80.2
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 3.4e-107 392.1 259 78.8
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.4e-107 392.1 259 79.5
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 3.4e-107 392.1 266 79.3
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.4e-107 391.7 259 79.2
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.7e-107 391.3 259 79.5
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 5.7e-107 391.3 256 81.6
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 7.5e-107 391.0 253 83.0
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 9.8e-107 390.6 259 79.5
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 1.7e-106 389.8 264 77.7
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.7e-106 389.8 255 81.6
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.7e-106 389.8 262 78.6
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 3.7e-106 388.7 255 81.2
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 4.9e-106 388.3 255 81.2
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.1e-105 387.1 257 80.2
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.1e-105 387.1 259 77.2
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 1.4e-105 386.7 257 79.4
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.8e-105 386.3 259 76.8
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.8e-105 386.3 272 77.2
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 1.8e-105 386.3 255 78.0
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.8e-105 386.3 254 81.1
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.1e-105 385.6 255 79.2
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 4.1e-105 385.2 253 80.2
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 5.4e-105 384.8 259 77.2
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 5.4e-105 384.8 260 78.1
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 1.2e-104 383.6 258 80.2
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 1.2e-104 383.6 257 78.6
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 1.2e-104 383.6 254 80.7
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.6e-104 383.3 257 76.3
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 2.7e-104 382.5 257 76.3
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 3.5e-104 382.1 257 76.3
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 4.5e-104 381.7 258 79.1
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 5.9e-104 381.3 257 78.2
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 7.8e-104 380.9 241 83.8
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.3e-103 380.2 257 75.9
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.3e-103 380.2 257 75.9
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 2.9e-103 379.0 255 77.3
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 2.9e-103 379.0 255 77.3
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 5.0e-103 378.3 257 76.3
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 6.6e-103 377.9 257 76.3
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 6.6e-103 377.9 258 77.9
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 8.6e-103 377.5 257 75.9
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 8.6e-103 377.5 249 81.9
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 8.6e-103 377.5 257 75.9
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.1e-102 377.1 259 79.2
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.5e-102 376.7 259 76.8
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 1.9e-102 376.3 256 78.1
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 1.9e-102 376.3 255 78.4
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 4.3e-102 375.2 257 78.2
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 9.5e-102 374.0 260 76.5
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 9.5e-102 374.0 255 78.0
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.2e-101 373.6 255 78.4
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 3.0e-100 369.0 279 73.8
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.9e-100 367.5 259 73.4
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.0e-99 366.3 256 74.2
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.4e-99 365.5 253 75.5
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 4.4e-99 365.2 251 75.7
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 5.7e-99 364.8 288 71.9
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 3.7e-98 362.1 225 84.4
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 6.4e-98 361.3 257 74.7
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 7.0e-97 357.8 225 83.6
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.0e-96 356.3 231 81.8
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 3.0e-95 352.4 261 72.4
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 8.6e-95 350.9 264 69.3
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.5e-94 349.4 258 72.1
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.1e-93 346.3 259 68.7
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.3e-92 342.8 258 69.8
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.0e-91 339.7 257 67.7
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.0e-91 339.7 254 69.7
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.6e-88 328.6 261 67.4
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 6.0e-88 328.2 265 70.6
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 5.2e-84 315.1 259 68.7
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.4e-81 306.2 252 65.9
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 3.0e-79 299.3 212 75.5
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 6.0e-64 248.4 160 81.2
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.3e-63 247.3 177 71.2
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-62 243.4 255 51.4
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 2.9e-58 229.6 150 81.3
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 3.5e-56 222.6 258 53.5
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 6.2e-53 211.8 154 75.3
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 3.5e-48 196.1 235 43.0
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 7.4e-46 188.3 249 43.0
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.9e-42 175.6 259 47.1
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 6.0e-40 168.7 235 42.6
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.7e-34 150.6 95 78.9
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 7.2e-33 145.2 96 79.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.3e-31 140.2 240 34.2
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 5.3e-28 129.0 77 88.3
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 8.5e-26 121.7 117 59.0
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.4e-25 120.9 231 35.5
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.4e-25 120.9 75 85.3
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.2e-19 101.3 101 62.4
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.1e-09 68.2 52 69.2


User provided reference genes

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