Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 5.9e-143 510.8 240 100.0
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 2.5e-141 505.4 240 98.8
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 1.1e-85 320.5 217 65.9
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.9e-80 303.1 230 63.0
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 1.9e-80 303.1 229 62.0
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.7e-79 299.3 219 63.0
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.7e-79 299.3 219 63.0
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 6.0e-79 298.1 232 59.5
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 3.9e-78 295.4 232 57.8
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.9e-77 293.1 217 62.7
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 2.5e-77 292.7 233 57.1
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 1.6e-76 290.0 234 58.5
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 6.2e-76 288.1 224 62.1
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 6.2e-76 288.1 238 57.1
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 1.8e-75 286.6 231 59.7
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 1.8e-75 286.6 261 54.4
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.3e-75 286.2 232 58.6
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 3.1e-75 285.8 264 54.2
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 8.9e-75 284.3 237 59.1
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.5e-74 283.5 233 57.5
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 1.5e-74 283.5 233 56.2
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 2.0e-74 283.1 230 57.8
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.6e-74 282.7 233 58.8
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 3.4e-74 282.3 248 57.3
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 4.4e-74 282.0 203 64.0
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 4.4e-74 282.0 234 57.3
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 5.8e-74 281.6 200 65.0
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 9.8e-74 280.8 233 56.2
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.3e-73 280.4 237 58.6
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.3e-73 280.4 248 56.5
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.3e-73 280.4 196 64.8
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.3e-73 280.4 230 55.7
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 2.2e-73 279.6 235 55.7
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 2.9e-73 279.3 233 56.7
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 3.7e-73 278.9 217 59.9
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 1.4e-72 276.9 239 54.8
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.9e-72 276.6 218 57.8
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.9e-72 276.6 214 57.5
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 2.4e-72 276.2 235 54.9
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 2.4e-72 276.2 229 56.3
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 4.1e-72 275.4 239 58.2
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 4.1e-72 275.4 235 54.5
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.0e-70 270.8 197 60.9
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.3e-70 270.4 223 57.8
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.3e-70 270.4 227 56.4
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 2.3e-70 269.6 218 57.8
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 5.1e-70 268.5 239 57.3
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 5.1e-70 268.5 238 55.9
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 5.1e-70 268.5 223 58.3
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 6.6e-70 268.1 231 54.1
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 8.6e-70 267.7 188 66.0
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 8.6e-70 267.7 248 57.3
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.9e-69 266.5 223 57.4
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 1.9e-69 266.5 215 58.1
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 2.5e-69 266.2 233 57.9
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 2.5e-69 266.2 226 56.6
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 3.3e-69 265.8 263 53.6
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 4.3e-69 265.4 231 57.1
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 5.6e-69 265.0 215 58.6
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.2e-68 263.8 201 59.2
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.6e-68 263.5 236 54.2
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 2.1e-68 263.1 189 59.3
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 2.1e-68 263.1 230 54.8
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.1e-68 263.1 256 51.2
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 2.1e-68 263.1 204 60.3
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 2.8e-68 262.7 215 56.7
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.8e-68 262.7 226 53.5
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 3.6e-68 262.3 230 54.8
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 4.7e-68 261.9 208 59.1
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 8.1e-68 261.2 226 55.3
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 3.1e-67 259.2 201 60.2
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 3.1e-67 259.2 239 52.7
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 5.2e-67 258.5 193 62.2
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 8.9e-67 257.7 191 63.4
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 2.6e-66 256.1 216 56.5
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 3.4e-66 255.8 242 53.7
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 5.8e-66 255.0 220 57.7
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 1.3e-65 253.8 240 51.7
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 3.8e-65 252.3 186 60.8
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 4.9e-65 251.9 240 51.2
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 4.9e-65 251.9 243 51.9
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 6.4e-65 251.5 218 55.5
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 6.4e-65 251.5 218 55.5
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 1.9e-64 250.0 244 51.2
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.9e-64 250.0 246 49.6
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.9e-64 250.0 200 60.0
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 3.2e-64 249.2 205 55.6
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 3.2e-64 249.2 252 50.4
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 4.1e-64 248.8 242 53.7
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.6e-63 246.9 185 60.0
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 3.0e-62 242.7 195 58.5
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 3.0e-62 242.7 195 57.9
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 5.1e-62 241.9 139 74.8
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 1.1e-61 240.7 217 53.5
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 3.3e-61 239.2 215 54.4
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 4.3e-61 238.8 177 60.5
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 9.6e-61 237.7 168 63.1
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 8.1e-60 234.6 179 60.9
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 8.1e-60 234.6 179 60.9
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 2.4e-59 233.0 218 53.2
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.1e-59 232.6 206 53.4
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 3.1e-59 232.6 211 55.0
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 2.6e-58 229.6 225 53.3
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 4.4e-58 228.8 225 52.9
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.9e-57 225.3 166 60.2
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 6.4e-57 224.9 139 69.1
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 6.4e-57 224.9 139 69.1
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 1.1e-56 224.2 139 69.1
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 1.3e-54 217.2 161 62.1
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 6.2e-52 208.4 135 63.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.0e-50 203.4 156 57.7
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 7.6e-50 201.4 166 55.4
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 4.6e-39 165.6 129 55.8
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.8e-38 163.7 218 44.0
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.2e-34 151.0 92 69.6
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 5.8e-34 148.7 131 51.9
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.9e-33 145.6 134 48.5
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 2.5e-32 143.3 92 65.2
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 5.9e-26 122.1 102 51.0
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.4e-14 84.3 163 36.2
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 6.7e-06 55.5 82 37.8


User provided reference genes

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