Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 6.5e-111 404.1 201 100.0
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 3.9e-108 394.8 201 98.0
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 1.4e-100 369.8 201 90.5
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 7.0e-81 304.3 198 74.2
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 1.2e-80 303.5 195 73.3
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 4.5e-80 301.6 200 71.5
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 1.0e-79 300.4 200 70.5
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 1.0e-79 300.4 200 72.0
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 1.7e-79 299.7 198 72.7
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 1.1e-78 297.0 200 73.5
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 1.1e-78 297.0 198 74.2
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 1.9e-78 296.2 200 71.5
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 2.5e-78 295.8 200 72.0
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 4.2e-78 295.0 201 72.1
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 5.5e-78 294.7 200 73.0
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 7.2e-78 294.3 200 70.5
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 7.2e-78 294.3 198 72.2
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.2e-77 293.5 200 72.0
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 2.7e-77 292.4 200 72.0
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 2.7e-77 292.4 200 71.5
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 3.6e-77 292.0 200 70.5
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 3.6e-77 292.0 198 71.7
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 1.0e-76 290.4 198 72.7
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 1.0e-76 290.4 200 71.0
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 1.0e-76 290.4 198 70.7
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 2.3e-76 289.3 200 71.5
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 2.3e-76 289.3 199 69.8
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.0e-76 288.9 200 70.5
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 4.0e-76 288.5 200 71.5
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 4.0e-76 288.5 199 69.8
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 4.0e-76 288.5 200 70.0
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 4.0e-76 288.5 200 70.0
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 5.2e-76 288.1 198 71.7
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 5.2e-76 288.1 200 70.5
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 6.7e-76 287.7 200 71.5
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.2e-75 287.0 199 69.3
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 1.2e-75 287.0 198 69.7
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.5e-75 286.6 200 70.0
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 2.6e-75 285.8 193 73.1
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 3.3e-75 285.4 198 70.2
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 9.7e-75 283.9 198 68.7
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 1.3e-74 283.5 200 70.5
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 1.7e-74 283.1 201 69.2
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 1.7e-74 283.1 200 70.0
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 2.2e-74 282.7 193 72.5
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.2e-74 282.7 193 72.5
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 4.8e-74 281.6 198 68.7
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 6.3e-74 281.2 193 72.5
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 2.4e-73 279.3 198 69.2
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 2.4e-73 279.3 198 68.2
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 7.0e-73 277.7 200 68.0
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 9.1e-73 277.3 193 69.9
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 9.1e-73 277.3 200 68.0
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.2e-72 276.9 198 69.2
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 1.2e-72 276.9 198 67.7
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 1.2e-72 276.9 198 67.2
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 1.2e-72 276.9 193 69.9
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 2.0e-72 276.2 200 67.5
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 2.0e-72 276.2 204 68.1
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 5.9e-72 274.6 193 71.5
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 5.9e-72 274.6 198 66.2
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 5.9e-72 274.6 200 66.5
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 1.0e-71 273.9 193 69.4
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.0e-71 273.9 195 68.7
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.3e-71 273.5 200 67.0
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.7e-71 273.1 193 70.5
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.1e-70 270.4 210 64.8
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.1e-70 270.4 194 71.1
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 1.1e-70 270.4 198 67.7
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 3.2e-70 268.9 198 65.7
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 5.5e-70 268.1 196 68.4
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 7.2e-70 267.7 195 67.7
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 9.4e-70 267.3 198 65.2
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.2e-69 266.9 200 66.5
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 1.6e-69 266.5 195 66.2
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 1.6e-69 266.5 195 66.2
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 2.1e-69 266.2 195 65.6
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 2.7e-69 265.8 200 67.0
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 3.6e-69 265.4 200 65.5
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 3.6e-69 265.4 195 65.1
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 3.6e-69 265.4 200 65.5
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 3.6e-69 265.4 193 66.8
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 3.6e-69 265.4 194 69.6
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 4.7e-69 265.0 198 65.2
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 6.1e-69 264.6 200 64.5
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 6.1e-69 264.6 200 64.5
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 1.0e-68 263.8 200 64.5
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 1.0e-68 263.8 200 65.5
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 1.4e-68 263.5 195 66.2
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 3.0e-68 262.3 195 66.7
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 4.0e-68 261.9 200 64.0
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 4.0e-68 261.9 192 66.7
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 1.2e-67 260.4 200 66.0
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 2.0e-67 259.6 198 61.6
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.3e-66 256.9 182 68.7
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 2.8e-66 255.8 198 62.6
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 8.3e-66 254.2 182 69.2
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 8.3e-66 254.2 203 61.6
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 8.3e-66 254.2 198 61.1
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 1.8e-65 253.1 195 64.6
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 7.0e-65 251.1 201 58.7
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 1.6e-64 250.0 175 70.9
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 1.0e-63 247.3 175 67.4
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 1.7e-63 246.5 198 63.1
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 1.7e-63 246.5 200 62.5
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 2.3e-63 246.1 201 62.7
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.1e-62 243.8 184 66.8
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 1.1e-62 243.8 200 60.5
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 1.1e-62 243.8 181 66.3
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 3.3e-62 242.3 200 60.0
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 7.2e-62 241.1 328 43.9
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 9.5e-62 240.7 198 61.1
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 6.1e-61 238.0 198 60.6
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 1.4e-60 236.9 186 60.2
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 3.0e-60 235.7 177 67.2
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 1.5e-59 233.4 167 70.1
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 1.3e-55 220.3 239 53.1
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 5.0e-55 218.4 220 53.2
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 1.1e-54 217.2 219 53.9
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 7.3e-54 214.5 250 48.4
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.8e-52 209.9 233 52.4
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 8.9e-52 207.6 190 52.1
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 2.6e-51 206.1 193 51.3
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 4.4e-51 205.3 167 61.1
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 1.6e-45 186.8 128 73.4
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 7.5e-43 177.9 112 75.0
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 2.2e-42 176.4 223 46.2
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 4.9e-42 175.3 195 47.2
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 1.9e-41 173.3 112 73.2
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 3.2e-41 172.6 197 46.2
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 1.6e-40 170.2 201 45.8
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 1.9e-38 163.3 173 50.9
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 5.6e-38 161.8 115 69.6
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 3.6e-37 159.1 117 65.0
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 1.2e-32 144.1 113 61.1
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 1.0e-31 141.0 209 40.7
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 8.6e-31 137.9 89 68.5
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 1.1e-28 131.0 85 70.6
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.5e-27 127.1 103 61.2
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 5.8e-27 125.2 84 67.9
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 3.8e-26 122.5 194 40.2
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 4.9e-26 122.1 87 66.7
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.9e-25 120.2 81 70.4
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 7.1e-25 118.2 81 69.1
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.2e-21 107.5 124 48.4
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 1.1e-20 104.4 130 46.2
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.6e-19 99.8 68 69.1
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 4.4e-19 99.0 68 69.1
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.3e-18 97.4 72 63.9
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 2.2e-18 96.7 70 67.1
PSO339G3282 Papaver somniferum HOM05D000073 ORTHO05D000033 7.1e-17 91.7 53 86.8
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 1.2e-16 90.9 98 50.0
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 2.1e-16 90.1 192 31.8
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 1.1e-14 84.3 74 56.8
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 3.3e-14 82.8 70 58.6
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 7.3e-14 81.6 192 29.7
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 1.6e-13 80.5 106 43.4
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 6.2e-13 78.6 75 56.0
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 8.1e-13 78.2 110 40.0
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 7.6e-11 71.6 49 63.3
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 2.2e-10 70.1 45 68.9
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 1.2e-08 64.3 45 64.4


User provided reference genes

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