Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 2.6e-64 248.4 115 100.0
PSO339G4707 Papaver somniferum HOM05D007482 ORTHO05D003038 8.1e-58 226.9 115 90.4
PSO648G0129 Papaver somniferum HOM05D007482 ORTHO05D003038 3.4e-56 221.5 115 88.7
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 5.4e-54 214.2 116 86.2
PSO630G0001 Papaver somniferum HOM05D007482 ORTHO05D003038 9.9e-48 193.4 95 90.5
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 5.4e-46 187.6 118 73.7
PSO339G4924 Papaver somniferum HOM05D033620 ORTHO05D003038 3.4e-16 88.6 113 38.9
PSO782G2157 Papaver somniferum HOM05D005672 ORTHO05D003038 7.7e-16 87.4 118 38.1
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 5.0e-15 84.7 114 43.0
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 8.5e-15 84.0 113 38.1
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 8.5e-15 84.0 113 36.3
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.9e-14 82.8 114 37.7
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.2e-14 82.0 113 39.8
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 4.2e-14 81.6 103 40.8
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 7.2e-14 80.9 115 37.4
AT1G12660 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 1.6e-13 79.7 121 38.0
PSO339G5535 Papaver somniferum HOM05D033620 ORTHO05D003038 2.1e-13 79.3 121 38.8
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 2.7e-13 79.0 118 36.4
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 2.7e-13 79.0 103 38.8
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.6e-13 78.6 113 37.2
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 4.6e-13 78.2 104 40.4
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 4.6e-13 78.2 121 34.7
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 6.1e-13 77.8 115 36.5
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 1.0e-12 77.0 114 34.2
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 1.4e-12 76.6 114 37.7
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 2.3e-12 75.9 122 37.7
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 3.0e-12 75.5 113 39.8
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 3.9e-12 75.1 127 36.2
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 3.9e-12 75.1 115 38.3
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 5.1e-12 74.7 130 35.4
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 5.1e-12 74.7 118 34.7
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 5.1e-12 74.7 118 34.7
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 6.7e-12 74.3 108 33.3
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 8.8e-12 73.9 106 38.7
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 8.8e-12 73.9 114 38.6
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 1.1e-11 73.6 118 34.7
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 1.1e-11 73.6 103 37.9
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 1.1e-11 73.6 102 36.3
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 1.1e-11 73.6 102 36.3
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 1.1e-11 73.6 102 36.3
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 1.5e-11 73.2 95 42.1
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 1.5e-11 73.2 117 35.9
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 2.0e-11 72.8 118 36.4
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 2.0e-11 72.8 113 35.4
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 2.0e-11 72.8 110 34.5
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 2.5e-11 72.4 118 34.7
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 2.5e-11 72.4 118 34.7
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 2.5e-11 72.4 118 34.7
BcaC05g25122 Brassica carinata HOM05D007482 ORTHO05D003038 3.3e-11 72.0 110 34.5
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 3.3e-11 72.0 128 32.8
CARHR012970 Cardamine hirsuta HOM05D007482 ORTHO05D003038 3.3e-11 72.0 119 32.8
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 3.3e-11 72.0 111 41.4
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 3.3e-11 72.0 114 35.1
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 4.3e-11 71.6 131 34.4
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 4.3e-11 71.6 106 37.7
BolC8t52262H Brassica oleracea HOM05D007482 ORTHO05D003038 5.7e-11 71.2 118 33.9
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 5.7e-11 71.2 113 34.5
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 7.4e-11 70.9 112 31.2
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 7.4e-11 70.9 86 37.2
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 7.4e-11 70.9 128 32.8
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 9.7e-11 70.5 124 33.1
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 9.7e-11 70.5 124 33.1
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 9.7e-11 70.5 132 33.3
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.3e-10 70.1 105 36.2
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 1.7e-10 69.7 132 32.6
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-10 69.7 116 35.3
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 1.7e-10 69.7 113 36.3
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 1.7e-10 69.7 116 32.8
BraA06t26175Z Brassica rapa HOM05D007482 ORTHO05D003038 2.2e-10 69.3 98 35.7
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 2.8e-10 68.9 95 38.9
BolC3t18270H Brassica oleracea HOM05D007482 ORTHO05D003038 2.8e-10 68.9 98 35.7
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 2.8e-10 68.9 113 33.6
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 4.8e-10 68.2 133 32.3
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 4.8e-10 68.2 128 32.0
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 6.3e-10 67.8 85 38.8
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 6.3e-10 67.8 122 33.6
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 6.3e-10 67.8 121 33.1
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 6.3e-10 67.8 104 35.6
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 8.2e-10 67.4 110 31.8
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 8.2e-10 67.4 110 31.8
C05p10620 Brassica napus HOM05D007482 ORTHO05D003038 1.1e-09 67.0 110 30.9
BolC5t29804H Brassica oleracea HOM05D007482 ORTHO05D003038 1.1e-09 67.0 110 30.9
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.1e-09 67.0 107 41.1
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 1.1e-09 67.0 116 36.2
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 1.4e-09 66.6 123 36.6
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 1.4e-09 66.6 96 40.6
Thhalv10009322m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.4e-09 66.6 109 33.9
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 1.4e-09 66.6 115 35.7
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-09 66.2 123 36.6
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-09 66.2 130 32.3
BraA09t41719Z Brassica rapa HOM05D007482 ORTHO05D003038 2.4e-09 65.9 132 31.8
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 4.1e-09 65.1 98 33.7
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 5.3e-09 64.7 112 36.6
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 5.3e-09 64.7 115 34.8
BolC8t52263H Brassica oleracea HOM05D007482 ORTHO05D003038 5.3e-09 64.7 98 34.7
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 5.3e-09 64.7 87 40.2
A09p63710 Brassica napus HOM05D007482 ORTHO05D003038 6.9e-09 64.3 136 30.9
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 6.9e-09 64.3 105 38.1
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.5e-08 63.2 120 33.3
C05p44570 Brassica napus HOM05D007482 ORTHO05D003038 2.0e-08 62.8 117 33.3
C08p47230 Brassica napus HOM05D007482 ORTHO05D003038 2.0e-08 62.8 98 33.7
BolC5t33184H Brassica oleracea HOM05D007482 ORTHO05D003038 2.0e-08 62.8 117 33.3
Ciclev10027446m.g Citrus clementina HOM05D005672 ORTHO05D003038 2.0e-08 62.8 108 36.1
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 2.0e-08 62.8 119 33.6
PSO791G0001 Papaver somniferum HOM05D048766 ORTHO05D003038 2.6e-08 62.4 113 32.7
PSO832G3804 Papaver somniferum HOM05D048766 ORTHO05D003038 2.6e-08 62.4 113 32.7
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 3.4e-08 62.0 88 37.5
Carub.0001s1239 Capsella rubella HOM05D007482 ORTHO05D003038 3.4e-08 62.0 77 41.6
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 3.4e-08 62.0 104 31.7
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 3.4e-08 62.0 104 31.7
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 4.5e-08 61.6 115 33.0
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 4.5e-08 61.6 106 35.8
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 4.5e-08 61.6 106 35.8
Nn8g39244 Nelumbo nucifera HOM05D005672 ORTHO05D003038 7.7e-08 60.8 112 33.0
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 1.3e-07 60.1 106 35.8
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 1.7e-07 59.7 119 35.3
Carub.0001s1238 Capsella rubella HOM05D007482 ORTHO05D003038 2.2e-07 59.3 125 32.0
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 2.2e-07 59.3 110 33.6
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 2.2e-07 59.3 104 35.6
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 2.2e-07 59.3 112 34.8
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 2.2e-07 59.3 82 40.2
A05p29160 Brassica napus HOM05D007482 ORTHO05D003038 2.9e-07 58.9 111 31.5
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 2.9e-07 58.9 118 33.1
BcaC05g25168 Brassica carinata HOM05D007482 ORTHO05D003038 3.8e-07 58.5 88 30.7
CiPaw.02G152000 Carya illinoinensis HOM05D005672 ORTHO05D003038 3.8e-07 58.5 120 31.7
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 3.8e-07 58.5 118 33.1
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 3.8e-07 58.5 113 31.0
Migut.I00854 Erythranthe guttata HOM05D033963 ORTHO05D035179 1.1e-06 57.0 83 37.3
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 1.1e-06 57.0 89 33.7
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 1.1e-06 57.0 128 33.6
Ciclev10026837m.g Citrus clementina HOM05D005672 ORTHO05D003038 2.5e-06 55.8 75 40.0
PGR102G1467 Punica granatum HOM05D005672 ORTHO05D003038 2.5e-06 55.8 114 33.3
Carub.0001s1236 Capsella rubella HOM05D007482 ORTHO05D003038 3.2e-06 55.5 121 32.2
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 7.2e-06 54.3 60 45.0
BcaB07g32750 Brassica carinata HOM05D007482 ORTHO05D003038 9.4e-06 53.9 79 38.0


User provided reference genes

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