Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 0.0e+00 2329.3 1203 100.0
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 0.0e+00 2229.9 1194 96.6
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 0.0e+00 1238.4 1234 57.5
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1192.6 1185 57.0
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 0.0e+00 1180.6 1244 56.0
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1153.3 1225 54.9
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1152.1 1196 54.9
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 0.0e+00 1149.8 1238 54.5
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 0.0e+00 1147.5 1219 54.5
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 0.0e+00 1142.9 1234 54.3
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1140.2 1221 54.1
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1135.9 1221 54.0
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1131.3 1233 53.0
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 0.0e+00 1126.7 1224 53.6
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 0.0e+00 1124.4 1262 54.8
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 0.0e+00 1112.4 1245 53.2
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1112.1 1167 55.4
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1108.2 1180 54.1
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 0.0e+00 1100.9 1237 53.5
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 0.0e+00 1100.5 1171 53.4
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 0.0e+00 1100.1 1179 54.6
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1098.6 1242 51.9
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1096.6 1175 54.4
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1094.3 1224 52.9
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 0.0e+00 1094.3 1226 52.7
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 0.0e+00 1088.9 1229 53.0
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 0.0e+00 1085.9 1179 53.4
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 0.0e+00 1085.1 1235 51.4
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 0.0e+00 1084.7 1232 52.1
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1084.3 1173 53.1
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1083.2 1233 51.3
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 0.0e+00 1080.9 1173 52.9
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1080.1 1173 53.2
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 0.0e+00 1077.8 1233 51.3
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1077.0 1300 50.5
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 0.0e+00 1077.0 1193 52.0
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 0.0e+00 1075.8 1246 50.4
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1075.8 1283 50.7
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 2.5e-311 1072.4 1233 51.5
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 9.9e-311 1070.5 1177 53.1
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 2.4e-309 1065.8 1173 52.9
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 7.6e-308 1060.8 1084 56.1
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 8.4e-307 1057.4 1235 50.9
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 1.4e-306 1056.6 1177 53.0
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 1.2e-305 1053.5 1183 52.8
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 1.1e-303 1047.0 1261 50.3
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 1.6e-302 1043.1 1249 50.2
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 2.1e-302 1042.7 1220 50.6
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 2.1e-302 1042.7 1254 50.1
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 1.2e-300 1036.9 1162 52.9
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 7.6e-300 1034.2 1176 52.1
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 3.8e-299 1031.9 1184 51.3
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 8.7e-296 1020.8 1303 49.0
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 7.4e-295 1017.7 1191 51.1
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 3.1e-293 1012.3 1169 50.6
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 5.3e-293 1011.5 1303 47.9
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 2.6e-292 1009.2 1174 50.0
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 2.2e-291 1006.1 1180 50.1
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 2.9e-291 1005.7 1188 49.5
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 2.1e-289 999.6 1018 57.6
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 7.7e-284 981.1 1255 47.9
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 1.3e-283 980.3 1191 48.5
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 7.9e-281 971.1 1200 49.8
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 8.2e-278 961.1 1161 49.4
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 3.4e-276 955.7 1206 49.3
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 7.4e-271 937.9 1166 46.8
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 7.0e-269 931.4 1273 47.9
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 3.8e-267 925.6 1206 46.8
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 5.0e-267 925.2 1172 48.5
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 1.6e-265 920.2 1195 47.3
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 9.7e-263 911.0 1303 44.1
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 9.7e-263 911.0 1207 46.6
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 8.2e-262 907.9 1248 44.6
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 4.5e-260 902.1 1260 45.3
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 2.1e-249 866.7 1173 45.1
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 3.6e-249 865.9 1179 45.9
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 1.8e-248 863.6 1213 43.2
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 2.7e-244 849.7 1068 48.0
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 2.7e-244 849.7 1183 45.6
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.2e-241 840.9 1100 47.6
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 1.7e-238 830.5 751 62.3
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 6.4e-238 828.6 1049 49.2
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 1.0e-235 821.2 1227 44.9
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 1.6e-220 770.8 969 46.1
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.4e-216 757.7 1210 42.6
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 5.2e-216 755.7 740 56.4
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 1.1e-205 721.5 1041 42.6
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 6.7e-195 685.6 728 54.7
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 5.3e-168 596.3 1195 36.3
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 3.0e-163 580.5 1202 36.3
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 1.5e-154 551.6 603 49.6
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 3.2e-149 533.9 1124 35.3
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 2.7e-148 530.8 1230 34.0
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 1.1e-133 482.3 626 47.9
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 1.6e-95 355.5 385 51.7
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 6.2e-84 317.0 386 47.7
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.1e-80 306.2 511 39.5
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 1.9e-72 278.9 1304 26.8
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 5.8e-66 257.3 458 41.3
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 7.4e-61 240.4 387 39.3
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 2.9e-41 175.3 214 48.6
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 6.8e-30 137.5 86 75.6
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 4.4e-29 134.8 197 44.7
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 1.8e-27 129.4 262 35.9
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 9.1e-27 127.1 129 51.9
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.6e-23 115.2 100 55.0
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 4.7e-23 114.8 266 32.7
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 4.7e-23 114.8 76 68.4
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 6.8e-22 110.9 71 69.0
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 7.5e-21 107.5 154 42.2
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 3.7e-20 105.1 172 40.7
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 5.0e-17 94.7 91 56.0
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 9.5e-16 90.5 110 50.0
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 9.5e-08 63.9 74 44.6
Cre07.g347700 Chlamydomonas reinhardtii HOM05D006963 ORTHO05D141144 3.6e-07 62.0 141 31.9
TAR629G2211 Trochodendron aralioides HOM05D002089 ORTHO05D022294 4.0e-06 58.5 90 38.9


User provided reference genes

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