Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 5.7e-181 637.5 332 100.0
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.1e-167 592.4 330 95.5
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.3e-105 387.1 335 63.6
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 1.3e-100 370.5 340 62.1
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 4.8e-95 352.1 343 59.2
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 6.9e-94 348.2 336 61.0
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 5.9e-93 345.1 338 59.5
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 1.7e-92 343.6 332 58.7
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.9e-91 340.1 339 60.5
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 2.6e-88 329.7 342 57.0
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 3.3e-88 329.3 337 57.0
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.6e-85 320.5 333 56.2
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 1.7e-84 317.0 339 55.8
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 1.9e-83 313.5 349 52.4
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 2.5e-83 313.2 333 55.9
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 4.2e-83 312.4 339 55.5
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 7.2e-83 311.6 342 55.3
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 9.4e-83 311.2 338 55.6
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 9.4e-83 311.2 334 55.1
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.2e-82 310.8 337 55.2
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 1.2e-82 310.8 340 54.4
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 2.1e-82 310.1 333 53.2
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 4.7e-82 308.9 320 55.9
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 4.7e-82 308.9 335 56.4
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 8.0e-82 308.1 329 56.2
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.8e-81 307.0 338 55.9
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 3.0e-81 306.2 339 54.6
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 4.0e-81 305.8 339 54.6
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 5.2e-81 305.4 339 56.3
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 6.7e-81 305.1 346 56.6
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 8.8e-81 304.7 340 54.7
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 8.8e-81 304.7 337 55.5
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.5e-80 303.9 333 55.3
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 2.0e-80 303.5 333 55.3
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 2.0e-80 303.5 336 52.4
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 4.4e-80 302.4 337 54.0
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 9.7e-80 301.2 339 54.9
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 9.7e-80 301.2 328 55.5
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 9.7e-80 301.2 337 55.5
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.7e-79 300.4 333 54.1
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.2e-79 300.1 326 54.9
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.2e-79 300.1 326 54.9
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.2e-79 300.1 328 55.5
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 4.8e-79 298.9 334 52.4
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.3e-79 298.5 328 55.2
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 9.1e-78 294.7 343 52.8
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 9.1e-78 294.7 334 54.8
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.6e-77 293.9 334 50.9
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 2.7e-77 293.1 331 58.3
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 2.2e-76 290.0 334 49.7
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.9e-75 287.0 321 53.6
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 2.1e-74 283.5 344 50.9
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 3.6e-74 282.7 318 52.8
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.4e-73 280.8 341 49.9
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 8.8e-73 278.1 322 52.8
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.0e-72 276.9 332 51.2
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 5.7e-72 275.4 330 52.7
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.7e-71 273.9 336 52.1
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 6.3e-71 271.9 350 48.6
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.4e-70 270.8 344 50.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.4e-70 270.0 305 55.4
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 4.1e-70 269.2 299 53.8
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.1e-70 269.2 343 48.4
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 5.4e-70 268.9 333 49.5
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.6e-69 267.3 340 48.8
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 4.5e-69 265.8 336 50.6
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 5.9e-69 265.4 325 48.0
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 5.9e-69 265.4 346 49.1
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 7.7e-69 265.0 328 51.8
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.3e-68 264.2 328 51.5
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.3e-68 264.2 346 48.8
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 1.7e-68 263.8 140 89.3
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 6.5e-68 261.9 319 50.5
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 1.1e-67 261.2 348 50.0
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 1.5e-67 260.8 364 51.4
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 2.5e-67 260.0 342 48.0
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.2e-66 257.7 317 50.5
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 3.6e-66 256.1 330 49.1
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 4.7e-66 255.8 372 49.5
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.8e-65 253.8 344 48.3
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.5e-64 250.8 334 48.2
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 3.4e-64 249.6 317 48.6
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 1.1e-62 244.6 376 44.1
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 2.0e-61 240.4 415 45.8
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 6.1e-58 228.8 127 84.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 5.2e-57 225.7 353 43.9
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 4.4e-56 222.6 318 43.1
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 5.4e-54 215.7 334 46.1
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.1e-51 208.0 109 84.4
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 2.8e-50 203.4 318 43.4
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 6.2e-50 202.2 109 84.4
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 8.0e-50 201.8 109 85.3
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 1.2e-48 198.0 289 48.4
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 4.4e-48 196.1 308 40.9
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 1.4e-46 191.0 120 73.3
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 7.8e-45 185.3 135 63.7
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.0e-44 183.3 98 87.8
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 5.0e-44 182.6 98 83.7
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 1.9e-43 180.6 244 50.8
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.6e-42 177.6 98 83.7
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 3.1e-41 173.3 95 83.2
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 3.4e-40 169.9 124 63.7
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.1e-38 164.9 117 69.2
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 3.5e-37 159.8 115 66.1
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 2.1e-34 150.6 98 73.5
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 2.2e-31 140.6 238 42.9
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 4.3e-27 126.3 269 37.9
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 9.9e-24 115.2 239 40.2
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.9e-20 103.2 240 39.6
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.4e-16 90.1 227 34.4
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 4.6e-13 79.7 84 54.8
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 6.0e-13 79.3 50 72.0
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 6.0e-13 79.3 50 72.0
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 6.0e-13 79.3 50 72.0
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 3.0e-12 77.0 82 51.2
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 6.7e-12 75.9 221 30.8
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 1.1e-11 75.1 41 82.9
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 5.6e-11 72.8 146 37.7
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 9.0e-09 65.5 221 28.5
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 9.0e-09 65.5 44 68.2
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.8e-07 60.1 228 31.6
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 1.4e-06 58.2 140 35.7
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 2.5e-06 57.4 138 34.8


User provided reference genes

Program Settings