Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 2020.7 1068 100.0
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1993.0 1068 98.7
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 0.0e+00 1681.4 1080 81.9
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 0.0e+00 1677.5 1083 81.7
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1653.3 1081 81.1
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 0.0e+00 1610.5 1082 78.3
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 0.0e+00 1604.0 1079 77.8
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 0.0e+00 1596.6 1090 77.3
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 0.0e+00 1590.9 1081 77.7
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1589.3 1075 77.0
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 0.0e+00 1588.2 1072 77.4
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1586.6 1082 77.1
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 0.0e+00 1570.8 1076 76.1
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 0.0e+00 1569.3 1072 76.9
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 0.0e+00 1565.4 1082 76.9
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1564.7 1075 76.2
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 0.0e+00 1562.7 1076 76.1
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1557.0 1082 76.2
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1555.0 1075 76.1
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 0.0e+00 1552.3 1076 75.9
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 0.0e+00 1552.0 1082 75.8
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1543.5 1081 75.6
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 0.0e+00 1542.3 1074 75.3
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1531.5 1076 74.9
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 0.0e+00 1531.2 1046 76.8
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 0.0e+00 1530.8 1074 75.0
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1530.0 1076 75.0
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1525.4 1076 74.1
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 0.0e+00 1525.0 1082 75.0
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 0.0e+00 1524.2 1079 74.5
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 0.0e+00 1519.6 1074 73.8
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 0.0e+00 1517.7 1081 73.5
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1516.9 1081 74.7
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1516.5 1088 73.8
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 0.0e+00 1511.1 1079 74.3
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1510.7 1030 76.6
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 0.0e+00 1500.3 1069 73.8
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 0.0e+00 1498.8 1081 72.6
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1496.1 1085 73.3
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1494.6 1070 73.6
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1490.3 1079 73.0
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 0.0e+00 1488.8 1088 72.6
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1487.6 1159 69.7
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 0.0e+00 1486.9 1076 72.8
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 0.0e+00 1486.1 1098 72.0
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 0.0e+00 1484.9 1082 72.1
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1481.5 1076 72.5
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 0.0e+00 1478.8 1073 71.7
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 0.0e+00 1476.1 1081 72.1
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1469.1 1070 72.5
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1466.1 1070 72.4
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 0.0e+00 1459.5 1070 72.1
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 0.0e+00 1454.1 1003 77.2
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1451.4 1112 70.9
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 0.0e+00 1449.9 1086 71.6
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1449.9 1079 72.8
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 0.0e+00 1433.3 1071 70.1
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 0.0e+00 1432.5 1073 70.4
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 0.0e+00 1427.9 1071 70.1
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 0.0e+00 1425.6 1071 69.8
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 0.0e+00 1418.7 1067 72.0
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 0.0e+00 1418.7 1066 70.3
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1411.4 1089 69.0
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1409.8 1089 68.9
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1407.5 1074 69.4
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 0.0e+00 1405.2 1071 69.1
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1402.9 1104 67.8
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 0.0e+00 1394.4 1081 68.8
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1391.3 1090 67.9
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1390.9 1071 68.6
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1388.2 1105 67.0
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1384.0 1066 69.1
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 0.0e+00 1380.5 1098 68.0
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1375.1 1066 67.7
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1374.4 1067 68.9
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1372.1 1058 68.8
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1372.1 1090 67.3
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1371.3 1090 68.2
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1364.7 1057 69.5
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 0.0e+00 1360.5 997 72.8
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 0.0e+00 1358.6 1067 67.9
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1355.9 1195 64.2
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1355.1 948 75.4
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1351.7 1073 67.3
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1345.9 1144 66.2
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1344.7 1090 67.4
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 0.0e+00 1342.4 1096 66.3
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 0.0e+00 1335.9 1157 65.9
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1334.3 1074 68.1
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 0.0e+00 1328.2 1070 66.0
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 0.0e+00 1325.5 1068 66.8
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1323.5 1089 65.8
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 0.0e+00 1322.8 1018 69.6
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1321.2 1106 65.7
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 0.0e+00 1320.4 1079 66.4
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1307.0 1112 64.5
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 0.0e+00 1283.1 1074 64.9
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 0.0e+00 1270.0 1048 66.3
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1262.3 1174 61.6
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1246.5 1062 65.0
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1219.1 1068 64.0
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 0.0e+00 1213.4 1259 56.6
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 0.0e+00 1194.9 860 73.7
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 0.0e+00 1171.4 1059 62.5
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 0.0e+00 1161.0 1080 60.2
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 0.0e+00 1158.3 909 69.2
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 0.0e+00 1124.8 740 79.1
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.2e-309 1066.6 910 64.1
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 9.8e-307 1057.0 1079 54.7
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 3.4e-299 1031.9 1098 52.4
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 8.6e-287 990.7 973 58.8
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 4.6e-280 968.4 727 72.1
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 6.0e-272 941.4 1087 50.1
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 3.3e-270 935.6 634 77.9
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 2.4e-265 919.5 846 62.4
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 6.2e-261 904.8 1071 48.3
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 1.4e-252 877.1 1051 48.2
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 3.8e-234 815.8 781 60.4
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 1.2e-216 757.7 516 76.4
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 3.0e-207 726.5 566 70.5
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 5.2e-207 725.7 558 69.2
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 4.4e-198 696.0 709 56.7
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 3.1e-196 689.9 561 66.7
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 2.2e-194 683.7 575 65.6
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 3.0e-191 673.3 805 50.4
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 2.8e-184 650.2 536 67.2
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 6.1e-184 649.0 1227 36.3
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.2e-179 634.8 846 48.1
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 1.4e-167 594.7 432 71.3
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 1.2e-155 555.1 397 73.3
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 9.6e-145 518.8 373 75.1
CDE10G0060 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 5.6e-137 493.0 395 67.1
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 7.3e-137 492.7 352 71.9
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 6.9e-127 459.5 360 70.0
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.1e-121 442.2 367 67.8
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 4.8e-120 436.8 324 73.5
Cpa.g.sc53.134 Carica papaya HOM05D003976 ORTHO05D004711 1.8e-111 408.3 345 66.4
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 9.3e-108 396.0 286 71.7
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 1.2e-107 395.6 274 76.6
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 2.6e-94 351.3 358 55.6
Cc02_g10920 Coffea canephora HOM05D003976 ORTHO05D004711 7.2e-84 316.6 229 72.5
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 5.2e-74 283.9 177 80.2
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 3.4e-65 254.6 159 79.2
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 1.5e-60 239.2 129 97.7
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 1.5e-60 239.2 143 83.2
CDE10G0301 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 3.3e-60 238.0 162 76.5
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 1.9e-55 222.2 139 79.9
vmacro00384 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 6.8e-50 203.8 108 91.7
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 1.4e-47 196.1 139 69.1
TPR.G33031 Trifolium pratense HOM05D003976 ORTHO05D004711 1.0e-37 163.3 107 73.8
Actinidia18608 Actinidia chinensis HOM05D003976 ORTHO05D004711 4.7e-35 154.5 85 88.2
AL491U10010 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 8.1e-35 153.7 103 74.8
CAN.G796.1 Capsicum annuum HOM05D003976 ORTHO05D004711 3.4e-33 148.3 171 50.9
Cc02_g10910 Coffea canephora HOM05D003976 ORTHO05D004711 4.4e-33 147.9 111 72.1
vmacro00385 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.9e-31 142.5 93 77.4
Psat7g009440 Pisum sativum HOM05D003976 ORTHO05D004711 7.1e-31 140.6 86 76.7
Gohir.D10G210566 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.6e-30 139.4 87 73.6
Lsat_1_v5_gn_4_4660 Lactuca sativa HOM05D003976 ORTHO05D004711 3.5e-30 138.3 170 50.0
Lj6g0023100 Lotus japonicus HOM05D003976 ORTHO05D004711 1.9e-28 132.5 117 60.7
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-28 130.6 92 73.9
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-27 127.1 108 61.1
Cre01.g003050 Chlamydomonas reinhardtii HOM05D003976 ORTHO05D004711 1.1e-26 126.7 203 33.5
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 4.4e-25 121.3 87 74.7
TPR.G28835 Trifolium pratense HOM05D003976 ORTHO05D004711 5.8e-25 120.9 79 69.6
Lsat_1_v5_gn_9_29220 Lactuca sativa HOM05D003976 ORTHO05D006024 5.4e-23 114.4 86 66.3
Prupe.5G231200 Prunus persica HOM05D003976 ORTHO05D004711 3.6e-19 101.7 100 57.0
Cc06_g17220 Coffea canephora HOM05D003976 ORTHO05D004711 1.2e-17 96.7 81 58.0
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 3.2e-15 88.6 62 74.2
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 3.2e-15 88.6 62 74.2
Lalb_Chr21g0313561 Lupinus albus HOM05D003976 ORTHO05D004711 4.6e-14 84.7 84 57.1
Lalb_Chr21g0313691 Lupinus albus HOM05D003976 ORTHO05D004711 4.6e-14 84.7 84 57.1
Hma1.2p1_0384F.1_g140760 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 5.1e-13 81.3 49 83.7
Lsat_1_v5_gn_6_63420 Lactuca sativa HOM05D003976 ORTHO05D004711 4.3e-12 78.2 72 55.6
Aa31LG6G7350 Aethionema arabicum HOM05D003976 ORTHO05D004711 2.4e-10 72.4 68 60.3
MBI18_g27470_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 3.1e-10 72.0 52 65.4
HanXRQChr05g0134171 Helianthus annuus HOM05D003976 ORTHO05D004711 1.2e-09 70.1 52 71.2
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 1.5e-09 69.7 48 70.8
Cc03_g09730 Coffea canephora HOM05D003976 ORTHO05D004711 3.2e-07 62.0 56 57.1


User provided reference genes

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