Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 2.0e-103 379.0 182 100.0
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 2.1e-100 369.0 182 96.2
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 5.4e-72 274.6 179 71.5
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 2.7e-71 272.3 182 68.1
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 3.5e-71 271.9 183 66.7
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 5.9e-71 271.2 181 67.4
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 8.5e-70 267.3 181 66.3
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 2.5e-69 265.8 184 64.1
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 9.4e-69 263.8 183 64.5
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 1.2e-68 263.5 178 67.4
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 2.1e-68 262.7 181 65.2
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 2.7e-68 262.3 180 63.3
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 2.7e-68 262.3 181 65.7
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.0e-67 260.4 183 63.9
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 1.0e-67 260.4 182 65.9
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 1.4e-67 260.0 179 65.9
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 1.4e-67 260.0 180 65.6
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 1.8e-67 259.6 177 67.2
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 2.3e-67 259.2 180 66.7
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 2.3e-67 259.2 177 68.4
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 2.3e-67 259.2 179 65.9
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 5.2e-67 258.1 177 63.8
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 5.2e-67 258.1 177 63.8
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 5.2e-67 258.1 180 63.9
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 6.8e-67 257.7 179 64.8
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 6.8e-67 257.7 181 65.2
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 6.8e-67 257.7 183 65.0
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 8.8e-67 257.3 180 62.8
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 8.8e-67 257.3 181 63.0
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 1.2e-66 256.9 180 65.0
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 1.5e-66 256.5 180 63.9
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 2.0e-66 256.1 180 65.0
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 2.0e-66 256.1 181 64.1
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 2.0e-66 256.1 180 65.6
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 4.4e-66 255.0 179 63.1
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 4.4e-66 255.0 180 66.7
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 5.7e-66 254.6 180 63.3
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 7.5e-66 254.2 187 65.2
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 9.8e-66 253.8 177 63.3
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 9.8e-66 253.8 174 67.8
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 1.3e-65 253.4 180 65.0
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 2.2e-65 252.7 179 63.1
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 2.8e-65 252.3 175 66.3
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 2.8e-65 252.3 180 65.6
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 2.8e-65 252.3 180 62.2
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 4.9e-65 251.5 175 64.6
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 1.4e-64 250.0 185 63.2
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 1.8e-64 249.6 172 65.1
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 3.1e-64 248.8 177 65.0
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 4.1e-64 248.4 178 64.0
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 4.1e-64 248.4 172 65.1
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 5.4e-64 248.1 180 63.9
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 7.0e-64 247.7 181 61.3
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 9.2e-64 247.3 174 65.5
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 9.2e-64 247.3 174 64.9
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 1.6e-63 246.5 178 62.4
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 2.0e-63 246.1 175 65.1
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 4.5e-63 245.0 183 60.7
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 5.9e-63 244.6 177 63.3
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 5.9e-63 244.6 178 62.4
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 7.7e-63 244.2 180 60.6
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 3.8e-62 241.9 177 62.1
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 6.6e-62 241.1 173 63.6
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 1.1e-61 240.4 177 62.1
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 1.5e-61 240.0 179 60.9
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 7.3e-61 237.7 180 62.8
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 9.5e-61 237.3 170 63.5
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 1.2e-60 236.9 180 62.2
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 2.8e-60 235.7 180 62.2
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 2.8e-60 235.7 175 58.9
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 2.8e-60 235.7 180 60.0
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 3.6e-60 235.3 174 63.2
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 3.6e-60 235.3 180 60.6
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 3.6e-60 235.3 178 60.7
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 4.7e-60 235.0 179 59.8
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 6.1e-60 234.6 172 62.2
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 1.4e-59 233.4 175 61.7
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 5.2e-59 231.5 183 60.7
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 6.8e-59 231.1 181 58.6
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 2.0e-58 229.6 157 66.9
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 3.4e-58 228.8 165 63.0
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 4.4e-58 228.4 174 59.2
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 7.5e-58 227.6 167 63.5
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.3e-57 226.9 172 59.3
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 2.2e-57 226.1 180 60.6
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.1e-56 223.8 148 67.6
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 2.4e-56 222.6 168 63.1
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 3.2e-56 222.2 168 63.1
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 3.2e-56 222.2 177 55.4
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 1.2e-55 220.3 171 57.3
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.6e-55 219.9 154 63.0
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 3.0e-54 215.7 171 57.3
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 8.6e-54 214.2 152 66.4
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 5.6e-53 211.5 173 58.4
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 5.6e-53 211.5 173 54.9
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 5.6e-53 211.5 173 54.9
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 1.2e-52 210.3 172 54.7
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 2.8e-52 209.1 180 53.9
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 3.6e-52 208.8 151 63.6
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 6.2e-52 208.0 160 58.8
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 6.2e-52 208.0 158 60.8
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 8.0e-52 207.6 173 56.1
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 1.2e-47 193.7 175 53.1
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 4.6e-47 191.8 154 57.1
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 1.2e-42 177.2 178 48.9
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 4.4e-42 175.3 175 46.3
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 6.4e-41 171.4 183 44.8
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 6.4e-41 171.4 130 56.9
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 1.2e-39 167.2 143 56.6
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 2.7e-39 166.0 178 44.4
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 2.1e-36 156.4 124 55.6
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 1.1e-35 154.1 176 46.6
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 3.0e-30 136.0 127 54.3
ClCG06G015800 Citrullus lanatus HOM05D005325 ORTHO05D008457 1.3e-20 104.0 153 39.9
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 1.7e-17 93.6 174 34.5
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 2.4e-16 89.7 192 33.3
Atru.chr3.4243 Acer truncatum HOM05D005325 ORTHO05D008457 7.1e-16 88.2 68 58.8
Aa31LG5G6850 Aethionema arabicum HOM05D005325 ORTHO05D008457 3.0e-14 82.8 57 57.9
Lsat_1_v5_gn_9_104180 Lactuca sativa HOM05D005325 ORTHO05D024237 4.3e-13 79.0 95 46.3


User provided reference genes

Program Settings