Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 7.1e-96 354.0 187 100.0
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 5.1e-94 347.8 187 97.3
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 2.8e-60 235.7 200 67.5
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 8.2e-60 234.2 189 70.9
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 5.3e-59 231.5 199 68.8
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 1.0e-57 227.3 190 67.4
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 5.0e-57 224.9 164 75.0
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 8.5e-57 224.2 154 77.9
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 1.5e-56 223.4 165 73.9
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 2.5e-56 222.6 195 65.6
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 7.2e-56 221.1 182 69.8
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 2.7e-55 219.2 195 64.6
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 3.6e-55 218.8 191 67.5
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 4.7e-55 218.4 202 65.3
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 4.7e-55 218.4 166 74.1
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 1.0e-54 217.2 170 74.1
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.0e-54 217.2 190 67.9
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 1.4e-54 216.9 150 77.3
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.8e-54 216.5 163 75.5
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 1.8e-54 216.5 196 67.3
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 2.3e-54 216.1 172 71.5
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 2.3e-54 216.1 194 67.0
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 3.0e-54 215.7 188 64.9
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 3.0e-54 215.7 186 66.1
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 3.0e-54 215.7 153 76.5
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.0e-54 215.7 153 76.5
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.0e-54 215.3 153 75.8
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 5.2e-54 214.9 188 66.0
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 6.8e-54 214.5 163 70.6
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 6.8e-54 214.5 180 67.2
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 6.8e-54 214.5 190 67.4
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 8.8e-54 214.2 191 65.4
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 8.8e-54 214.2 191 65.4
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 8.8e-54 214.2 151 74.8
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 8.8e-54 214.2 191 67.5
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 8.8e-54 214.2 166 71.1
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 8.8e-54 214.2 192 64.6
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 1.2e-53 213.8 195 67.7
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 1.2e-53 213.8 173 68.8
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 1.2e-53 213.8 187 66.8
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.5e-53 213.4 164 71.3
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.5e-53 213.4 155 76.1
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.5e-53 213.4 196 64.8
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 2.0e-53 213.0 195 66.2
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 2.0e-53 213.0 159 75.5
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 2.0e-53 213.0 155 76.1
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 2.0e-53 213.0 160 73.1
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.6e-53 212.6 159 73.6
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 2.6e-53 212.6 183 67.2
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 2.6e-53 212.6 158 75.3
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 3.4e-53 212.2 169 71.0
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 3.4e-53 212.2 161 72.0
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 3.4e-53 212.2 196 65.3
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 4.4e-53 211.8 195 65.6
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 4.4e-53 211.8 195 63.6
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 4.4e-53 211.8 195 63.6
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.4e-53 211.8 195 63.6
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 5.7e-53 211.5 158 74.7
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 5.7e-53 211.5 194 65.5
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 7.5e-53 211.1 200 65.0
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 7.5e-53 211.1 160 72.5
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 7.5e-53 211.1 180 70.6
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 7.5e-53 211.1 196 65.3
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 9.8e-53 210.7 149 78.5
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 1.3e-52 210.3 134 80.6
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.3e-52 210.3 190 65.8
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 1.7e-52 209.9 161 72.0
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 2.2e-52 209.5 196 64.8
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 3.7e-52 208.8 151 76.2
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 8.3e-52 207.6 154 72.7
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 1.8e-51 206.5 193 64.2
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 1.8e-51 206.5 187 65.2
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 2.4e-51 206.1 156 71.2
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 3.1e-51 205.7 144 78.5
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 7.0e-51 204.5 147 75.5
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 9.1e-51 204.1 192 62.5
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 9.1e-51 204.1 154 73.4
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.2e-50 203.8 188 62.2
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.2e-50 203.8 188 62.2
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 1.2e-50 203.8 167 68.3
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.6e-50 203.4 150 73.3
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 1.6e-50 203.4 188 62.2
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.6e-50 203.4 151 71.5
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 2.7e-50 202.6 186 62.4
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 5.9e-50 201.4 146 75.3
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 1.0e-49 200.7 190 63.7
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 1.7e-49 199.9 154 70.8
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 3.8e-49 198.7 188 62.8
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 5.0e-49 198.4 188 60.6
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 5.0e-49 198.4 188 60.6
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 8.5e-49 197.6 190 61.1
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 8.5e-49 197.6 199 62.3
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 2.5e-48 196.1 195 60.0
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.5e-48 196.1 154 68.8
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 2.5e-48 196.1 191 62.8
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 5.5e-48 194.9 188 59.0
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 1.2e-47 193.7 200 59.5
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 3.6e-47 192.2 131 77.1
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 6.1e-47 191.4 189 58.2
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 6.1e-47 191.4 137 75.2
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.8e-46 189.9 198 57.6
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 2.6e-45 186.0 139 70.5
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 3.4e-45 185.7 200 57.0
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 4.4e-45 185.3 122 75.4
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 2.8e-44 182.6 142 68.3
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 3.7e-44 182.2 118 82.2
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 5.4e-43 178.3 138 68.1
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 2.0e-42 176.4 122 76.2
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 2.7e-42 176.0 165 63.0
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 5.9e-42 174.9 117 80.3
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 1.9e-40 169.9 173 53.8
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 1.0e-38 164.1 120 75.0
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 8.9e-38 161.0 111 77.5
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 4.4e-37 158.7 108 78.7
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 1.8e-35 153.3 124 60.5
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 2.3e-33 146.4 180 47.2
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 2.1e-31 139.8 135 59.3
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 8.0e-31 137.9 86 87.2
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.8e-30 136.7 86 87.2
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 3.1e-30 136.0 86 86.0
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 3.4e-29 132.5 147 55.8
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 1.2e-26 124.0 146 52.7
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 1.5e-24 117.1 101 65.3
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.9e-24 116.7 138 55.8
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 2.3e-22 109.8 95 60.0
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 5.2e-22 108.6 92 66.3
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 9.8e-21 104.4 93 63.4
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.1e-14 84.3 53 75.5
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.6e-07 60.5 105 35.2


User provided reference genes

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