Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 2.5e-114 415.6 235 100.0
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 6.4e-102 374.4 236 86.9
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 1.3e-49 200.7 185 54.6
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 8.5e-46 188.0 175 49.1
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 3.2e-45 186.0 186 49.5
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 3.2e-45 186.0 186 49.5
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 9.4e-45 184.5 184 48.4
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.7e-44 183.0 186 48.4
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 4.7e-44 182.2 185 47.0
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 6.1e-44 181.8 185 48.1
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 2.3e-43 179.9 186 47.3
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 6.7e-43 178.3 236 44.9
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 2.0e-42 176.8 186 45.2
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 2.0e-42 176.8 175 50.3
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 2.0e-42 176.8 183 45.4
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 3.3e-42 176.0 181 47.0
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 9.7e-42 174.5 185 47.6
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.7e-41 173.7 185 46.5
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 6.3e-41 171.8 186 45.7
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.1e-40 171.0 182 48.4
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 1.4e-40 170.6 185 42.7
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 3.1e-40 169.5 184 45.1
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 5.3e-40 168.7 171 49.7
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.2e-39 167.5 180 45.6
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 1.6e-39 167.2 186 43.5
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.6e-39 167.2 184 44.6
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.6e-39 167.2 184 44.6
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 1.6e-39 167.2 175 46.3
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.7e-39 166.4 175 48.0
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.5e-39 166.0 173 48.0
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 3.5e-39 166.0 173 48.0
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 4.5e-39 165.6 186 47.8
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 4.5e-39 165.6 175 47.4
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 5.9e-39 165.2 173 47.4
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 5.9e-39 165.2 176 46.0
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 7.7e-39 164.9 184 43.5
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 1.0e-38 164.5 180 43.9
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.2e-38 163.3 184 43.5
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 2.2e-38 163.3 170 49.4
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 3.8e-38 162.5 187 44.4
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 5.0e-38 162.2 171 49.7
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 5.0e-38 162.2 184 46.2
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 8.5e-38 161.4 188 42.0
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 2.5e-37 159.8 173 45.7
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 3.2e-37 159.5 172 47.1
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 3.2e-37 159.5 185 42.2
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 3.2e-37 159.5 177 48.6
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 4.2e-37 159.1 170 45.9
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 1.6e-36 157.1 183 43.7
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.6e-36 157.1 180 44.4
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 2.1e-36 156.8 172 46.5
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 4.7e-36 155.6 188 41.5
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 6.1e-36 155.2 171 40.4
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 6.1e-36 155.2 173 43.9
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 8.0e-36 154.8 176 41.5
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 8.0e-36 154.8 168 48.8
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 1.0e-35 154.5 188 42.0
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.4e-35 154.1 173 43.4
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 3.0e-35 152.9 172 45.9
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 6.8e-35 151.8 166 44.0
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 6.8e-35 151.8 188 41.5
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 5.7e-34 148.7 188 40.4
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 5.7e-34 148.7 172 44.2
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.7e-33 147.1 190 40.0
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 6.3e-33 145.2 173 42.8
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 1.4e-32 144.1 185 43.2
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.4e-32 144.1 184 42.9
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.8e-32 143.7 182 39.6
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 4.1e-32 142.5 179 39.1
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 4.1e-32 142.5 176 43.2
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 9.1e-32 141.4 171 44.4
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 1.6e-31 140.6 175 41.1
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 2.0e-31 140.2 179 38.0
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 3.5e-31 139.4 186 38.7
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 3.5e-31 139.4 164 43.9
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 4.5e-31 139.0 180 38.9
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 4.5e-31 139.0 180 38.9
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 4.5e-31 139.0 174 40.2
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 7.7e-31 138.3 180 38.9
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.0e-30 137.9 179 38.0
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 1.0e-30 137.9 180 38.9
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 1.3e-30 137.5 202 41.1
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 2.2e-30 136.7 175 39.4
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 2.9e-30 136.3 175 40.6
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 6.5e-30 135.2 329 29.5
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 5.5e-29 132.1 195 40.5
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 7.2e-29 131.7 179 38.5
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.5e-26 124.0 182 37.9
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 7.5e-26 121.7 134 41.8
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.7e-25 120.6 153 39.9
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 2.8e-20 103.2 124 39.5
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.0e-19 101.3 106 50.0
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 2.9e-17 93.2 127 42.5
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 6.4e-17 92.0 78 52.6
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 7.0e-16 88.6 93 47.3
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 7.8e-15 85.1 96 39.6
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 7.8e-15 85.1 102 41.2
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 3.9e-14 82.8 199 28.6
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 5.6e-13 79.0 85 41.2
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 6.8e-11 72.0 92 39.1
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 8.9e-11 71.6 185 26.5
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 1.2e-10 71.2 181 23.8
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.2e-10 71.2 56 53.6
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 2.0e-10 70.5 79 44.3
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 4.4e-10 69.3 100 35.0
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.6e-07 60.8 72 45.8


User provided reference genes

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