Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0805 Papaver somniferum HOM05D004499 ORTHO05D004928 1.0e-158 563.5 323 100.0
PSO063G6372 Papaver somniferum HOM05D004499 ORTHO05D004928 1.2e-127 460.3 303 83.5
TAR623G0879 Trochodendron aralioides HOM05D004499 ORTHO05D004928 1.1e-24 118.2 349 35.5
Manes.09G078863 Manihot esculenta HOM05D004499 ORTHO05D004928 3.3e-24 116.7 340 34.1
MD04G1102600 Malus domestica HOM05D004499 ORTHO05D004928 1.4e-22 111.3 327 33.0
Medtr7g100830 Medicago truncatula HOM05D004499 ORTHO05D004928 6.9e-22 109.0 319 33.5
QL07p045089 Quercus lobata HOM05D004499 ORTHO05D004928 1.5e-21 107.8 340 33.2
Nn2g10698 Nelumbo nucifera HOM05D004499 ORTHO05D004928 2.0e-21 107.5 343 37.0
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 4.5e-21 106.3 350 30.3
CiPaw.09G179000 Carya illinoinensis HOM05D004499 ORTHO05D004928 7.6e-21 105.5 338 33.7
Prupe.6G240400 Prunus persica HOM05D004499 ORTHO05D004928 1.0e-20 105.1 344 35.8
Sed0006356 Sechium edule HOM05D004499 ORTHO05D004928 2.2e-20 104.0 336 33.6
Aqoxy4G03228 Aquilegia oxysepala HOM05D004499 ORTHO05D004928 2.9e-20 103.6 230 37.8
TWI53G1356 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 3.8e-20 103.2 355 30.4
Sabra06G0102500 Salix brachista HOM05D004499 ORTHO05D004928 4.9e-20 102.8 343 33.8
Dinv37265 Davidia involucrata HOM05D004499 ORTHO05D004928 6.5e-20 102.4 320 34.1
Gohir.A09G151400 Gossypium hirsutum HOM05D004499 ORTHO05D004928 4.2e-19 99.8 325 33.5
Haze_20629 Corylus avellana HOM05D004499 ORTHO05D004928 7.1e-19 99.0 337 31.2
Gohir.D09G147000 Gossypium hirsutum HOM05D004499 ORTHO05D004928 9.3e-19 98.6 333 31.8
Thecc.05G055800 Theobroma cacao HOM05D004499 ORTHO05D004928 9.3e-19 98.6 347 34.0
Gorai.006G168200 Gossypium raimondii HOM05D004499 ORTHO05D004928 2.7e-18 97.1 325 32.9
Potri.006G130500 Populus trichocarpa HOM05D004499 ORTHO05D004928 2.7e-18 97.1 343 33.5
Cpa.g.sc174.12 Carica papaya HOM05D004499 ORTHO05D004928 4.6e-18 96.3 319 31.0
CSS0026303 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 7.9e-18 95.5 331 31.1
CSS0037383 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 7.9e-18 95.5 334 30.5
Psat3g044200 Pisum sativum HOM05D004499 ORTHO05D004928 7.9e-18 95.5 325 35.4
CANSAT80G2505 Cannabis sativa HOM05D004499 ORTHO05D004928 1.0e-17 95.1 359 30.1
CiPaw.10G136800 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.0e-17 95.1 341 31.1
DCAR_014968 Daucus carota HOM05D004499 ORTHO05D004928 1.3e-17 94.7 304 35.9
Gorai.009G419500 Gossypium raimondii HOM05D004499 ORTHO05D004928 1.3e-17 94.7 337 36.2
RcHm_v2.0_Chr3g0469011 Rosa chinensis HOM05D004499 ORTHO05D004928 2.3e-17 94.0 250 36.8
Gohir.A04G075800 Gossypium hirsutum HOM05D004499 ORTHO05D004928 3.0e-17 93.6 337 36.2
FvH4_6g15510 Fragaria vesca HOM05D004499 ORTHO05D004928 3.9e-17 93.2 279 34.4
Sopen00g013370 Solanum pennellii HOM05D004499 ORTHO05D004928 3.9e-17 93.2 252 32.5
FAN05G3415 Fragaria x ananassa HOM05D004499 ORTHO05D004928 6.7e-17 92.4 327 31.5
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 6.7e-17 92.4 324 31.8
Nn2g13028 Nelumbo nucifera HOM05D004499 ORTHO05D004928 6.7e-17 92.4 365 30.7
Cfa017521 Carpinus fangiana HOM05D004499 ORTHO05D004928 8.7e-17 92.0 344 31.1
FAN14G2800 Fragaria x ananassa HOM05D004499 ORTHO05D004928 8.7e-17 92.0 279 34.4
Manes.08G004127 Manihot esculenta HOM05D004499 ORTHO05D004928 8.7e-17 92.0 239 36.8
Manes.08G004131 Manihot esculenta HOM05D004499 ORTHO05D004928 8.7e-17 92.0 239 36.8
CSS0015121 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 1.1e-16 91.7 337 33.5
FAN09G3365 Fragaria x ananassa HOM05D004499 ORTHO05D004928 1.1e-16 91.7 279 34.4
SalBow3G3210 Salvia bowleyana HOM05D004499 ORTHO05D004928 1.1e-16 91.7 330 29.7
Solyc09g007470.2 Solanum lycopersicum HOM05D004499 ORTHO05D004928 1.5e-16 91.3 220 33.6
VMungo1383G2757 Vigna mungo HOM05D004499 ORTHO05D004928 1.9e-16 90.9 314 32.2
Manes.08G004126 Manihot esculenta HOM05D004499 ORTHO05D004928 2.5e-16 90.5 239 36.4
Lalb_Chr25g0289231 Lupinus albus HOM05D004499 ORTHO05D004928 4.3e-16 89.7 356 31.7
Manes.08G004114 Manihot esculenta HOM05D004499 ORTHO05D004928 4.3e-16 89.7 239 36.4
Manes.08G004120 Manihot esculenta HOM05D004499 ORTHO05D004928 4.3e-16 89.7 239 36.4
TWI77G0862 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 4.3e-16 89.7 335 30.4
Manes.08G004109 Manihot esculenta HOM05D004499 ORTHO05D004928 7.4e-16 89.0 240 36.7
Manes.08G004117 Manihot esculenta HOM05D004499 ORTHO05D004928 7.4e-16 89.0 240 36.7
Sed0022446 Sechium edule HOM05D004499 ORTHO05D004928 7.4e-16 89.0 343 28.9
Duzib093G0117 Durio zibethinus HOM05D004499 ORTHO05D004928 9.7e-16 88.6 344 30.5
THA.LOC104806496 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 1.3e-15 88.2 329 28.6
Hma1.2p1_0111F.1_g054000 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 1.6e-15 87.8 315 32.4
FAN02G0924 Fragaria x ananassa HOM05D004499 ORTHO05D004928 2.8e-15 87.0 326 31.6
Ca_08832_v3 Cicer arietinum L. HOM05D004499 ORTHO05D004928 3.7e-15 86.7 304 35.5
Potri.016G086900 Populus trichocarpa HOM05D004499 ORTHO05D004928 3.7e-15 86.7 345 31.0
CARHR210240 Cardamine hirsuta HOM05D004499 ORTHO05D004928 6.3e-15 85.9 303 34.0
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 8.2e-15 85.5 244 32.8
Sabra16G0093100 Salix brachista HOM05D004499 ORTHO05D004928 1.1e-14 85.1 343 30.6
Oeu029418.1 Olea europaea HOM05D004499 ORTHO05D004928 2.4e-14 84.0 330 30.3
MSTRG.19143 Avicennia marina HOM05D004499 ORTHO05D004928 5.3e-14 82.8 331 29.9
Rhsim04G0149000 Rhododendron simsii HOM05D004499 ORTHO05D004928 5.3e-14 82.8 355 31.3
Thhalv10014228m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 6.9e-14 82.4 307 34.9
Carub.0006s0191 Capsella rubella HOM05D004499 ORTHO05D004928 1.2e-13 81.6 299 38.1
MELO3C009326.2 Cucumis melo HOM05D004499 ORTHO05D004928 1.2e-13 81.6 247 32.8
PGSC0003DMG400001742 Solanum tuberosum HOM05D004499 ORTHO05D004928 2.6e-13 80.5 301 29.2
AL6G12390 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 3.4e-13 80.1 301 32.9
Sp6g39600 Schrenkiella parvula HOM05D004499 ORTHO05D004928 3.4e-13 80.1 305 34.8
CsaV3_3G035670 Cucumis sativus L. HOM05D004499 ORTHO05D004928 7.7e-13 79.0 254 32.7
Migut.J00423 Erythranthe guttata HOM05D004499 ORTHO05D004928 7.7e-13 79.0 335 27.8
Medtr1g066750 Medicago truncatula HOM05D004499 ORTHO05D004928 7.7e-13 79.0 247 34.4
Lalb_Chr20g0112851 Lupinus albus HOM05D004499 ORTHO05D004928 1.3e-12 78.2 242 33.9
AT5G03110 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 1.7e-12 77.8 300 33.7
BcaC03g13031 Brassica carinata HOM05D004499 ORTHO05D004928 2.2e-12 77.4 313 31.0
C02p00790 Brassica napus HOM05D004499 ORTHO05D004928 2.2e-12 77.4 312 30.8
BolC2t06077H Brassica oleracea HOM05D004499 ORTHO05D004928 2.2e-12 77.4 312 30.8
Glyma.19G179400 Glycine max HOM05D004499 ORTHO05D004928 2.9e-12 77.0 321 30.5
Phvul.001G175400 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 3.8e-12 76.6 300 29.7
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 3.8e-12 76.6 281 28.8
Lj1g0000961 Lotus japonicus HOM05D004499 ORTHO05D004928 5.0e-12 76.3 327 30.6
THA.LOC104826978 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 5.0e-12 76.3 347 28.8
Lj5g0026303 Lotus japonicus HOM05D004499 ORTHO05D004928 6.5e-12 75.9 349 29.2
Lalb_Chr01g0018981 Lupinus albus HOM05D004499 ORTHO05D004928 8.5e-12 75.5 357 28.9
Lsat_1_v5_gn_6_30120 Lactuca sativa HOM05D004499 ORTHO05D004928 1.1e-11 75.1 309 29.1
Sc20g0005110 Simmondsia chinensis HOM05D004499 ORTHO05D004928 1.1e-11 75.1 331 28.4
Glyma.03G178700 Glycine max HOM05D004499 ORTHO05D004928 1.9e-11 74.3 316 27.8
MD12G1122400 Malus domestica HOM05D004499 ORTHO05D004928 2.5e-11 73.9 212 38.2
Manes.08G004906 Manihot esculenta HOM05D004499 ORTHO05D004928 4.2e-11 73.2 210 35.7
Manes.05G197001 Manihot esculenta HOM05D004499 ORTHO05D004928 5.5e-11 72.8 210 35.2
BcaB05g21851 Brassica carinata HOM05D004499 ORTHO05D004928 1.2e-10 71.6 316 31.3
Dinv35728 Davidia involucrata HOM05D004499 ORTHO05D004928 2.1e-10 70.9 147 37.4
Oeu059988.1 Olea europaea HOM05D004499 ORTHO05D004928 2.7e-10 70.5 145 44.8
Cc06_g03680 Coffea canephora HOM05D004499 ORTHO05D004928 3.6e-10 70.1 353 27.5
Glyma.10G050500 Glycine max HOM05D004499 ORTHO05D004928 3.6e-10 70.1 335 30.7
Manes.12G048251 Manihot esculenta HOM05D004499 ORTHO05D004928 3.6e-10 70.1 210 34.8
unitig_26.g9218 Utricularia gibba HOM05D004499 ORTHO05D004928 4.6e-10 69.7 309 30.1
BraA02t04744Z Brassica rapa HOM05D004499 ORTHO05D004928 7.9e-10 68.9 311 33.8
AUR62042302 Chenopodium quinoa HOM05D004499 ORTHO05D004928 1.0e-09 68.6 228 30.3
Lsat_1_v5_gn_1_54160 Lactuca sativa HOM05D004499 ORTHO05D004928 2.3e-09 67.4 305 27.2
Manes.05G197300 Manihot esculenta HOM05D004499 ORTHO05D004928 5.1e-09 66.2 249 31.7
SGA_v2.0_scaffold126G33909 Striga asiatica HOM05D004499 ORTHO05D004928 8.8e-09 65.5 326 24.8
Phvul.007G164800 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 1.5e-08 64.7 328 29.3
DCAR_009280 Daucus carota HOM05D004499 ORTHO05D004928 1.9e-08 64.3 259 29.3
Sp4g19420 Schrenkiella parvula HOM05D004499 ORTHO05D004928 3.3e-08 63.5 323 27.6
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 3.3e-08 63.5 335 28.1
MSTRG.26719 Avicennia marina HOM05D004499 ORTHO05D004928 4.3e-08 63.2 312 27.9
CARHR131610 Cardamine hirsuta HOM05D004499 ORTHO05D004928 4.3e-08 63.2 313 26.5
Gohir.D04G114901 Gossypium hirsutum HOM05D004499 ORTHO05D004928 4.3e-08 63.2 117 43.6
ECA233G0353 Erigeron canadensis HOM05D004499 ORTHO05D004928 1.3e-07 61.6 284 26.8
THA.LOC104816329 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 1.3e-07 61.6 325 30.8
Glyma.13G138000 Glycine max HOM05D004499 ORTHO05D004928 2.2e-07 60.8 328 29.0
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 2.2e-07 60.8 290 31.0
PSO339G1230 Papaver somniferum HOM05D004499 ORTHO05D004928 3.7e-07 60.1 208 35.6
Psat6g070200 Pisum sativum HOM05D004499 ORTHO05D004928 3.7e-07 60.1 270 34.8
Oeu060092.2 Olea europaea HOM05D000784 ORTHO05D004928 4.8e-07 59.7 318 26.4
COL.COLO4_27061 Corchorus olitorius HOM05D004499 ORTHO05D004928 6.3e-07 59.3 86 48.8
MSTRG.10304 Avicennia marina HOM05D004499 ORTHO05D004928 8.2e-07 58.9 321 28.3
Ah.15g092180 Amaranthus hybridus HOM05D004499 ORTHO05D004928 1.8e-06 57.8 200 32.5
Oeu038974.1 Olea europaea HOM05D004499 ORTHO05D004928 1.8e-06 57.8 377 32.1
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 4.1e-06 56.6 390 28.5
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 5.3e-06 56.2 348 26.7


User provided reference genes

Program Settings