Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO151G0155 Papaver somniferum HOM05D002160 ORTHO05D002012 5.0e-28 127.5 73 100.0
PSO339G0803 Papaver somniferum HOM05D002160 ORTHO05D002012 5.0e-28 127.5 73 100.0
PSO339G1859 Papaver somniferum HOM05D002160 ORTHO05D002012 4.8e-15 84.3 72 76.4
PSO339G1421 Papaver somniferum HOM05D002160 ORTHO05D002012 3.1e-14 81.6 72 73.6
PSO151G0128 Papaver somniferum HOM05D002160 ORTHO05D002012 7.0e-14 80.5 72 72.2
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 1.5e-11 72.8 73 68.5
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 6.1e-10 67.4 73 64.4
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 8.0e-10 67.0 73 67.1
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.4e-09 66.2 73 64.4
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.8e-09 65.9 73 64.4
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.8e-09 65.9 73 65.8
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 1.8e-09 65.9 73 64.4
CiPaw.03G262000 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.3e-09 65.5 73 49.3
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 2.3e-09 65.5 73 63.0
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 2.3e-09 65.5 73 63.0
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 2.3e-09 65.5 73 63.0
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 2.3e-09 65.5 74 62.2
MD04G1128900 Malus domestica HOM05D002160 ORTHO05D002012 2.3e-09 65.5 72 66.7
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 3.0e-09 65.1 72 58.3
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 5.2e-09 64.3 74 62.2
Duzib128G1340 Durio zibethinus HOM05D002160 ORTHO05D002012 5.2e-09 64.3 73 61.6
Gorai.007G376000 Gossypium raimondii HOM05D002160 ORTHO05D002012 5.2e-09 64.3 76 53.9
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 5.2e-09 64.3 77 62.3
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 6.8e-09 63.9 73 61.6
Gohir.D11G345700 Gossypium hirsutum HOM05D002160 ORTHO05D002012 6.8e-09 63.9 76 53.9
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 6.8e-09 63.9 72 63.9
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.5e-08 62.8 74 56.8
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 1.5e-08 62.8 73 60.3
MD12G1141500 Malus domestica HOM05D002160 ORTHO05D002012 2.0e-08 62.4 72 63.9
SalBow3G1804 Salvia bowleyana HOM05D002160 ORTHO05D002012 2.6e-08 62.0 75 58.7
GSVIVG01024970001 Vitis vinifera HOM05D002160 ORTHO05D002012 2.6e-08 62.0 84 57.1
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.4e-08 61.6 73 54.8
TWI31G0007 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 3.4e-08 61.6 73 61.6
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 4.4e-08 61.2 74 62.2
Sabra06G0064700 Salix brachista HOM05D002160 ORTHO05D002012 4.4e-08 61.2 73 60.3
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 5.7e-08 60.8 74 56.8
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 5.7e-08 60.8 77 59.7
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 5.7e-08 60.8 74 64.9
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 7.5e-08 60.5 73 60.3
Manes.02G133200 Manihot esculenta HOM05D002160 ORTHO05D002012 9.8e-08 60.1 56 69.6
TWI79G1473 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 9.8e-08 60.1 73 60.3
EL10Ac1g00022 Beta vulgaris HOM05D002160 ORTHO05D002012 1.3e-07 59.7 72 59.7
TPR.G23304 Trifolium pratense HOM05D002160 ORTHO05D002012 1.3e-07 59.7 73 61.6
Oeu011407.1 Olea europaea HOM05D002160 ORTHO05D002012 1.7e-07 59.3 76 59.2
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 2.8e-07 58.5 74 56.8
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 2.8e-07 58.5 74 59.5
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 3.7e-07 58.2 73 63.0
MBI14_g20106_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 3.7e-07 58.2 69 60.9
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 4.9e-07 57.8 73 58.9
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 4.9e-07 57.8 73 58.9
HanXRQChr08g0235781 Helianthus annuus HOM05D002160 ORTHO05D002012 4.9e-07 57.8 73 57.5
Manes.01G174400 Manihot esculenta HOM05D002160 ORTHO05D002012 4.9e-07 57.8 61 65.6
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 4.9e-07 57.8 71 62.0
COL.COLO4_14799 Corchorus olitorius HOM05D002160 ORTHO05D002012 6.3e-07 57.4 77 58.4
TWI31G0178 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 6.3e-07 57.4 73 58.9
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 8.3e-07 57.0 75 60.0
CANSAT54G0665 Cannabis sativa HOM05D002160 ORTHO05D002012 1.1e-06 56.6 74 54.1
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 1.1e-06 56.6 73 56.2
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 1.1e-06 56.6 73 57.5
Manes.01G174200 Manihot esculenta HOM05D002160 ORTHO05D002012 1.1e-06 56.6 61 63.9
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 1.4e-06 56.2 73 57.5
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.4e-06 56.2 73 42.5
Gohir.A11G326800 Gossypium hirsutum HOM05D002160 ORTHO05D002012 2.4e-06 55.5 71 56.3
Manes.07G091300 Manihot esculenta HOM05D002160 ORTHO05D002012 2.4e-06 55.5 54 68.5
CANSAT35G0429 Cannabis sativa HOM05D002160 ORTHO05D002012 3.1e-06 55.1 74 59.5
Cfa017382 Carpinus fangiana HOM05D002160 ORTHO05D002012 4.1e-06 54.7 73 57.5
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 5.4e-06 54.3 74 58.1
MBI17_g25955_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 5.4e-06 54.3 57 47.4
PGR004G1599 Punica granatum HOM05D002160 ORTHO05D002012 5.4e-06 54.3 74 59.5
TWI74G0912 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 5.4e-06 54.3 72 55.6
Haze_20789 Corylus avellana HOM05D002160 ORTHO05D002012 7.0e-06 53.9 73 57.5


User provided reference genes

Program Settings