Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 2.3e-221 771.9 384 100.0
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 7.2e-220 766.9 384 99.0
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 1.1e-167 593.6 388 79.4
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.2e-166 590.1 394 76.1
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 1.0e-165 587.0 390 76.9
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.1e-164 583.6 386 76.4
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 1.6e-163 579.7 392 75.0
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 1.1e-162 577.0 386 73.8
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 3.1e-162 575.5 386 76.2
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 5.3e-162 574.7 386 73.6
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.5e-161 573.2 386 73.8
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 4.5e-161 571.6 394 72.3
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 4.5e-161 571.6 388 73.7
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 4.5e-161 571.6 386 75.9
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 5.8e-161 571.2 388 74.7
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 1.0e-160 570.5 389 76.1
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 1.0e-160 570.5 388 74.2
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 3.8e-160 568.5 386 74.9
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 4.9e-160 568.2 387 75.7
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 8.4e-160 567.4 389 74.0
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 1.4e-159 566.6 388 73.7
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 2.5e-159 565.8 389 73.8
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 2.5e-159 565.8 389 73.8
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 2.5e-159 565.8 389 73.8
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 2.5e-159 565.8 394 73.4
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 4.6e-158 561.6 386 72.5
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 2.3e-157 559.3 388 73.7
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.3e-157 559.3 388 73.7
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 3.9e-157 558.5 386 73.6
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 1.5e-156 556.6 382 72.3
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 1.9e-156 556.2 387 73.6
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 4.3e-156 555.1 386 72.5
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.7e-156 554.7 390 73.3
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.4e-156 554.3 390 73.3
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 9.6e-156 553.9 390 71.5
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.6e-155 553.1 389 72.2
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.6e-155 553.1 389 72.2
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 1.6e-155 553.1 387 72.6
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 3.7e-155 552.0 390 70.8
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.7e-155 552.0 390 73.1
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 1.1e-154 550.4 390 73.3
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 2.4e-154 549.3 391 73.7
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 4.1e-154 548.5 407 71.5
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 1.5e-153 546.6 386 71.8
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 3.4e-153 545.4 400 71.0
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 4.5e-153 545.0 389 70.4
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 1.7e-152 543.1 388 72.9
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 5.0e-152 541.6 388 71.6
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 5.0e-152 541.6 388 71.6
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 1.1e-151 540.4 396 69.7
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 1.9e-151 539.7 390 70.5
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 2.5e-151 539.3 386 71.5
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 2.7e-150 535.8 392 72.4
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.8e-149 533.1 386 70.5
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 3.9e-149 531.9 391 69.6
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 6.7e-149 531.2 389 70.2
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 1.9e-148 529.6 397 68.3
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 4.3e-148 528.5 468 61.1
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 6.3e-147 524.6 435 64.4
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.1e-146 523.9 387 68.0
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 5.3e-146 521.5 387 69.3
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 6.9e-146 521.2 371 70.6
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 1.5e-145 520.0 390 69.0
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 1.5e-145 520.0 360 72.5
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 3.4e-145 518.8 389 68.9
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 3.4e-145 518.8 297 83.2
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 4.5e-145 518.5 371 70.1
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 5.9e-145 518.1 389 68.6
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 2.9e-144 515.8 389 68.6
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 2.9e-144 515.8 390 66.2
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.1e-143 513.8 389 67.6
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 3.2e-143 512.3 386 68.9
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 5.5e-143 511.5 389 69.4
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.2e-142 510.4 385 67.0
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.0e-141 507.3 386 66.8
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 2.3e-141 506.1 372 69.1
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 6.7e-141 504.6 388 66.2
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 2.5e-140 502.7 390 66.4
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 2.2e-139 499.6 385 66.2
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 2.2e-139 499.6 385 65.5
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.7e-139 498.8 390 65.6
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 3.4e-137 492.3 494 56.7
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 4.5e-137 491.9 388 65.2
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 7.7e-137 491.1 388 66.0
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 3.8e-136 488.8 281 81.5
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 2.1e-134 483.0 433 61.4
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 7.9e-134 481.1 390 63.8
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.8e-133 479.9 388 65.2
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 1.8e-133 479.9 330 69.7
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.3e-133 479.6 389 65.6
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.5e-132 476.9 390 63.1
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 6.3e-131 471.5 400 63.2
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 1.6e-129 466.8 304 72.0
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 7.7e-129 464.5 296 75.0
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.1e-127 460.7 294 76.2
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 2.2e-120 436.4 367 62.9
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 6.8e-117 424.9 384 61.2
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 5.2e-109 398.7 330 65.5
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.5e-103 380.6 293 60.8
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 6.1e-102 375.2 322 56.5
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 3.0e-101 372.9 296 58.1
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 5.2e-101 372.1 228 77.6
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 5.4e-98 362.1 296 56.8
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 7.3e-95 351.7 273 64.1
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 9.5e-95 351.3 217 74.2
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 1.2e-94 350.9 213 77.9
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 1.2e-94 350.9 213 77.9
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 1.2e-94 350.9 213 77.9
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 3.7e-91 339.3 213 77.0
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 9.8e-84 314.7 290 59.3
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 4.6e-81 305.8 291 49.5
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 4.9e-75 285.8 230 63.5
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.3e-72 277.7 177 76.3
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 3.9e-72 276.2 304 45.4
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 4.3e-71 272.7 285 46.0
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 9.3e-66 255.0 278 45.0
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 4.3e-63 246.1 157 79.6
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 1.9e-58 230.7 135 83.7
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 3.9e-40 169.9 171 56.1
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 3.3e-39 166.8 161 47.8
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.1e-37 161.8 174 50.0
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.3e-32 144.8 178 50.0
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 3.3e-31 140.2 106 64.2
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 2.2e-30 137.5 95 65.3
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 7.7e-28 129.0 87 65.5
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 2.2e-22 110.9 64 71.9
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 9.7e-15 85.5 46 80.4
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 9.7e-15 85.5 46 80.4
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 3.8e-11 73.6 111 45.0
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 3.0e-08 63.9 41 73.2


User provided reference genes

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