Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.0e-168 596.7 305 100.0
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 3.8e-163 578.2 308 97.4
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 7.7e-116 421.0 303 70.6
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 1.1e-109 400.6 297 70.4
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.5e-98 363.6 311 65.6
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 2.3e-96 356.3 314 62.1
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 1.2e-95 354.0 311 59.2
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.5e-95 353.6 219 77.6
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 5.8e-95 351.7 236 75.0
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 7.5e-95 351.3 298 64.4
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 7.5e-95 351.3 312 62.8
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 2.2e-94 349.7 297 63.3
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 4.9e-94 348.6 215 78.6
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.4e-94 348.2 297 62.6
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.4e-94 348.2 293 63.8
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 6.4e-94 348.2 306 62.1
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.9e-93 346.7 210 80.0
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 3.2e-93 345.9 321 59.5
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 4.1e-93 345.5 221 76.0
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 7.1e-93 344.7 300 62.3
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.2e-92 344.0 290 63.1
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.7e-92 342.8 251 70.5
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 3.5e-92 342.4 289 63.7
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 3.5e-92 342.4 287 63.1
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 4.6e-92 342.0 286 64.3
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 1.3e-91 340.5 207 79.2
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 1.7e-91 340.1 291 64.3
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 3.0e-91 339.3 298 62.4
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 3.9e-91 339.0 243 71.2
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 5.1e-91 338.6 297 62.0
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 6.6e-91 338.2 215 75.3
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.1e-90 337.4 260 67.7
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 1.1e-90 337.4 302 60.6
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 7.3e-90 334.7 229 71.2
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.6e-89 333.6 281 62.3
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 2.1e-89 333.2 288 63.5
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.1e-89 333.2 212 77.4
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 2.1e-89 333.2 292 62.0
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.8e-89 332.8 212 77.4
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 6.2e-89 331.6 206 77.7
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 1.1e-88 330.9 212 76.9
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 3.1e-88 329.3 229 71.2
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 3.1e-88 329.3 292 61.6
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 5.2e-88 328.6 286 61.9
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 1.5e-87 327.0 204 75.5
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 1.5e-87 327.0 239 69.9
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.3e-86 323.9 262 64.1
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 2.2e-86 323.2 263 64.3
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 4.9e-86 322.0 263 63.5
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 8.4e-86 321.2 251 65.7
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 1.1e-85 320.9 204 74.0
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 1.9e-85 320.1 248 64.9
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 4.1e-85 318.9 227 70.0
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 4.1e-85 318.9 230 68.7
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 9.2e-85 317.8 252 65.1
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 1.2e-84 317.4 230 68.7
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 1.2e-84 317.4 230 68.3
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.2e-84 317.4 295 58.6
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 1.2e-84 317.4 238 66.8
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 2.7e-84 316.2 267 60.7
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 2.7e-84 316.2 294 59.2
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 7.8e-84 314.7 230 67.4
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 7.8e-84 314.7 231 68.0
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 7.8e-84 314.7 231 68.0
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 1.0e-83 314.3 285 61.4
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.7e-83 313.5 215 69.8
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 3.9e-83 312.4 261 62.5
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 5.1e-83 312.0 294 58.8
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 6.6e-83 311.6 246 66.3
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 6.6e-83 311.6 231 67.1
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 6.6e-83 311.6 229 67.2
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 8.6e-83 311.2 215 69.3
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.1e-82 310.8 262 61.8
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.9e-82 310.1 206 72.8
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 8.9e-80 301.2 199 72.9
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.6e-79 299.7 237 64.6
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 5.8e-79 298.5 208 72.6
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 1.3e-78 297.4 228 64.0
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 1.7e-78 297.0 297 55.6
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 3.2e-77 292.7 207 70.0
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 7.1e-77 291.6 289 57.8
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 9.3e-77 291.2 210 64.8
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 6.0e-76 288.5 289 56.7
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 6.0e-76 288.5 256 61.3
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 2.8e-73 279.6 279 55.9
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 8.1e-73 278.1 219 64.4
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.4e-72 277.3 187 71.7
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 5.3e-72 275.4 217 64.5
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 4.2e-69 265.8 205 65.9
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 2.1e-68 263.5 172 73.8
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 1.1e-66 257.7 178 70.8
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.5e-66 257.3 255 55.7
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 4.8e-65 252.3 273 52.4
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 4.9e-62 242.3 233 57.5
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 1.1e-61 241.1 243 53.1
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.3e-58 229.2 224 55.4
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.3e-54 217.6 174 64.9
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 4.9e-54 215.7 155 71.6
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 1.4e-53 214.2 211 50.2
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 5.1e-43 179.1 151 59.6
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 8.2e-41 171.8 198 44.4
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.9e-37 160.6 88 84.1
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 2.1e-36 157.1 196 41.3
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 6.7e-35 152.1 94 75.5
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 7.4e-34 148.7 110 62.7
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.7e-33 147.5 95 70.5
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 3.8e-30 136.3 83 75.9
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 5.0e-30 136.0 91 71.4
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 2.3e-27 127.1 201 35.8
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.5e-26 124.4 91 64.8
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 1.7e-22 110.9 77 68.8
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 2.9e-22 110.2 132 48.5
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 4.0e-19 99.8 134 46.3
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.2e-18 98.2 68 64.7
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.6e-18 97.1 68 63.2
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 8.2e-17 92.0 75 62.7
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 3.5e-15 86.7 58 69.0
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 8.5e-14 82.0 55 69.1
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 1.1e-08 65.1 88 38.6
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 3.1e-08 63.5 57 54.4


User provided reference genes

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