Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 3.7e-45 184.5 93 100.0
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 1.1e-28 129.8 95 69.5
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.9e-28 129.0 90 74.4
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 2.7e-27 125.2 83 77.1
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 4.6e-27 124.4 90 72.2
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 6.0e-27 124.0 91 70.3
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 1.0e-26 123.2 90 72.2
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 3.9e-26 121.3 89 67.4
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.9e-26 121.3 89 71.9
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 8.6e-26 120.2 88 69.3
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-25 119.8 89 70.8
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 1.1e-25 119.8 90 68.9
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 1.1e-25 119.8 89 68.5
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 1.9e-25 119.0 95 66.3
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 1.9e-25 119.0 93 68.8
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 1.9e-25 119.0 93 69.9
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 2.5e-25 118.6 93 64.5
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 2.5e-25 118.6 92 66.3
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 4.3e-25 117.9 88 67.0
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 4.3e-25 117.9 88 67.0
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 9.5e-25 116.7 92 67.4
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 9.5e-25 116.7 92 67.4
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 9.5e-25 116.7 90 66.7
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 1.2e-24 116.3 95 68.4
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.2e-24 116.3 95 68.4
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.2e-24 116.3 95 68.4
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 1.2e-24 116.3 90 67.8
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.6e-24 115.9 85 70.6
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 2.1e-24 115.5 91 63.7
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 2.1e-24 115.5 89 66.3
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 2.1e-24 115.5 90 64.4
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 2.8e-24 115.2 83 68.7
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 2.8e-24 115.2 95 67.4
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 2.8e-24 115.2 93 64.5
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 3.6e-24 114.8 87 65.5
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 3.6e-24 114.8 83 69.9
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 4.7e-24 114.4 90 65.6
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 4.7e-24 114.4 90 65.6
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 4.7e-24 114.4 90 65.6
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 6.2e-24 114.0 90 63.3
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 8.1e-24 113.6 91 65.9
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 8.1e-24 113.6 87 66.7
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 1.1e-23 113.2 89 67.4
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.1e-23 113.2 89 64.0
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 1.1e-23 113.2 88 67.0
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 1.1e-23 113.2 87 69.0
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 1.1e-23 113.2 87 64.4
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 1.4e-23 112.8 89 64.0
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 1.8e-23 112.5 83 67.5
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 1.8e-23 112.5 91 63.7
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 1.8e-23 112.5 87 65.5
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 2.3e-23 112.1 96 62.5
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 2.3e-23 112.1 88 67.0
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 2.3e-23 112.1 88 62.5
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 3.1e-23 111.7 90 64.4
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 3.1e-23 111.7 88 67.0
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 3.1e-23 111.7 83 69.9
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 4.0e-23 111.3 89 65.2
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 4.0e-23 111.3 91 60.4
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 5.2e-23 110.9 89 61.8
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 6.8e-23 110.5 87 65.5
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 6.8e-23 110.5 91 63.7
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 6.8e-23 110.5 84 65.5
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 6.8e-23 110.5 95 58.9
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 8.9e-23 110.2 87 67.8
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 1.5e-22 109.4 90 64.4
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 1.5e-22 109.4 83 69.9
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 2.0e-22 109.0 93 61.3
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 2.6e-22 108.6 82 64.6
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 2.6e-22 108.6 91 59.3
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 2.6e-22 108.6 83 67.5
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 2.6e-22 108.6 91 61.5
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 4.4e-22 107.8 90 63.3
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 5.8e-22 107.5 91 61.5
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 9.9e-22 106.7 92 62.0
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 9.9e-22 106.7 90 61.1
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 1.3e-21 106.3 90 60.0
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 1.3e-21 106.3 89 57.3
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 1.3e-21 106.3 89 57.3
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 1.3e-21 106.3 93 59.1
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 1.3e-21 106.3 78 70.5
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 1.7e-21 105.9 90 60.0
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 2.2e-21 105.5 90 56.7
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 2.9e-21 105.1 90 60.0
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 3.7e-21 104.8 89 58.4
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 3.7e-21 104.8 85 61.2
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 4.9e-21 104.4 93 55.9
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 4.9e-21 104.4 83 61.4
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 4.9e-21 104.4 91 60.4
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 6.4e-21 104.0 89 56.2
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 6.4e-21 104.0 89 56.2
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 6.4e-21 104.0 89 56.2
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 6.4e-21 104.0 83 65.1
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 8.4e-21 103.6 83 61.4
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.9e-20 102.4 84 60.7
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 3.2e-20 101.7 79 64.6
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 5.4e-20 100.9 90 57.8
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 2.1e-19 99.0 91 56.0
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 2.7e-19 98.6 81 61.7
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 3.5e-19 98.2 83 57.8
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 7.8e-19 97.1 94 54.3
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 1.0e-18 96.7 91 56.0
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 3.9e-18 94.7 79 65.8
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 1.6e-16 89.4 103 49.5
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 3.6e-16 88.2 93 44.1
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 4.7e-16 87.8 93 45.2
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 1.4e-15 86.3 82 50.0
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 3.1e-15 85.1 93 47.3
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 1.2e-14 83.2 63 66.7
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 7.1e-12 73.9 84 45.2
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 3.5e-11 71.6 85 42.4
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 1.5e-09 66.2 69 50.7
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 1.3e-08 63.2 92 39.1
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 1.1e-07 60.1 85 36.5
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 4.0e-07 58.2 81 39.5


User provided reference genes

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