Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0497 Papaver somniferum HOM05D004114 ORTHO05D004667 0.0e+00 1249.6 656 100.0
Nn7g36204 Nelumbo nucifera HOM05D004114 ORTHO05D004667 1.5e-257 892.9 649 71.3
TAR633G1524 Trochodendron aralioides HOM05D004114 ORTHO05D004667 3.0e-250 868.6 622 73.8
Aqoxy2G00130 Aquilegia oxysepala HOM05D004114 ORTHO05D004667 7.2e-244 847.4 649 68.7
GSVIVG01025259001 Vitis vinifera HOM05D004114 ORTHO05D004667 1.7e-240 836.3 658 67.6
Dinv22178 Davidia involucrata HOM05D004114 ORTHO05D004667 8.2e-240 833.9 663 67.3
vmacro12717 Vaccinium macrocarpon HOM05D004114 ORTHO05D004667 1.5e-236 823.2 667 66.1
CSS0048735 Camellia sinensis var. sinensis HOM05D004114 ORTHO05D004667 7.2e-236 820.8 656 66.3
Actinidia23972 Actinidia chinensis HOM05D004114 ORTHO05D004667 1.2e-235 820.1 667 65.8
Dinv36259 Davidia involucrata HOM05D004114 ORTHO05D004667 6.1e-235 817.8 652 66.6
Manes.06G164400 Manihot esculenta HOM05D004114 ORTHO05D004667 8.0e-227 790.8 664 62.0
Thecc.09G233600 Theobroma cacao HOM05D004114 ORTHO05D004667 3.4e-225 785.4 665 62.0
CDE05G0618 Ceratophyllum demersum HOM05D004114 ORTHO05D004667 5.7e-225 784.6 655 62.6
Duzib150G0789 Durio zibethinus HOM05D004114 ORTHO05D004667 7.5e-225 784.3 661 62.5
QL01p004694 Quercus lobata HOM05D004114 ORTHO05D004667 1.4e-223 780.0 674 62.5
arahy.Tifrunner.gnm1.ann1.Q5U408 Arachis hypogaea HOM05D004114 ORTHO05D004667 7.0e-223 777.7 653 63.4
Medtr5g096860 Medicago truncatula HOM05D004114 ORTHO05D004667 9.2e-223 777.3 656 62.5
Oeu015664.1 Olea europaea HOM05D004114 ORTHO05D004667 1.6e-222 776.5 662 61.3
Ca_06427_v3 Cicer arietinum L. HOM05D004114 ORTHO05D004667 4.5e-222 775.0 656 62.0
MD11G1193200 Malus domestica HOM05D004114 ORTHO05D004667 4.5e-222 775.0 660 62.3
Cfa009771 Carpinus fangiana HOM05D004114 ORTHO05D004667 7.8e-222 774.2 642 62.9
arahy.Tifrunner.gnm1.ann1.49TU8N Arachis hypogaea HOM05D004114 ORTHO05D004667 1.3e-221 773.5 653 63.1
TWI34G1345 Tripterygium wilfordii HOM05D004114 ORTHO05D004667 1.3e-221 773.5 659 59.8
Prupe.4G249300 Prunus persica HOM05D004114 ORTHO05D004667 1.7e-221 773.1 658 62.0
Glyma.18G070400 Glycine max HOM05D004114 ORTHO05D004667 2.3e-221 772.7 653 63.4
Potri.009G053400 Populus trichocarpa HOM05D004114 ORTHO05D004667 2.3e-221 772.7 694 60.4
DCAR_029951 Daucus carota HOM05D004114 ORTHO05D004667 1.9e-220 769.6 657 62.3
MELO3C015192.2 Cucumis melo HOM05D004114 ORTHO05D004667 4.3e-220 768.5 652 61.3
LjContig00081g0000990 Lotus japonicus HOM05D004114 ORTHO05D004667 5.6e-220 768.1 656 61.7
CSS0035176 Camellia sinensis var. sinensis HOM05D004114 ORTHO05D004667 7.3e-220 767.7 656 63.4
Glyma.08G335400 Glycine max HOM05D004114 ORTHO05D004667 9.5e-220 767.3 653 63.1
COL.COLO4_07585 Corchorus olitorius HOM05D004114 ORTHO05D004667 1.2e-219 766.9 642 62.0
MD03G1175100 Malus domestica HOM05D004114 ORTHO05D004667 1.2e-219 766.9 660 61.8
Sc16g0011490 Simmondsia chinensis HOM05D004114 ORTHO05D004667 1.6e-219 766.5 643 63.6
TPR.G1262 Trifolium pratense HOM05D004114 ORTHO05D004667 2.8e-219 765.8 656 62.0
CsaV3_1G042830 Cucumis sativus L. HOM05D004114 ORTHO05D004667 4.7e-219 765.0 652 61.0
Phvul.006G062700 Phaseolus vulgaris HOM05D004114 ORTHO05D004667 4.7e-219 765.0 651 62.2
Gohir.D09G111100 Gossypium hirsutum HOM05D004114 ORTHO05D004667 1.8e-218 763.1 660 61.7
Atru.chr3.2717 Acer truncatum HOM05D004114 ORTHO05D004667 5.2e-218 761.5 645 62.9
Sabra09G0038900 Salix brachista HOM05D004114 ORTHO05D004667 5.2e-218 761.5 688 59.4
Glyma.02G304000 Glycine max HOM05D004114 ORTHO05D004667 8.9e-218 760.8 653 61.6
Gorai.006G128700 Gossypium raimondii HOM05D004114 ORTHO05D004667 4.4e-217 758.4 660 61.4
RcHm_v2.0_Chr5g0052041 Rosa chinensis HOM05D004114 ORTHO05D004667 7.5e-217 757.7 650 61.1
FvH4_3g28860 Fragaria vesca HOM05D004114 ORTHO05D004667 1.7e-216 756.5 648 61.9
Lalb_Chr15g0082581 Lupinus albus HOM05D004114 ORTHO05D004667 1.1e-215 753.8 650 61.5
Gohir.A09G114400 Gossypium hirsutum HOM05D004114 ORTHO05D004667 2.4e-215 752.7 664 61.0
Phvul.008G283500 Phaseolus vulgaris HOM05D004114 ORTHO05D004667 3.2e-215 752.3 653 61.4
FAN16G1351 Fragaria x ananassa HOM05D004114 ORTHO05D004667 5.4e-215 751.5 648 61.3
THA.LOC104817907 Tarenaya hassleriana HOM05D004114 ORTHO05D004667 7.0e-215 751.1 656 58.4
CANSAT54G0770 Cannabis sativa HOM05D004114 ORTHO05D004667 7.8e-214 747.7 656 61.0
Nn2g15370 Nelumbo nucifera HOM05D004114 ORTHO05D004667 8.6e-213 744.2 543 70.9
VMungo0647G1293 Vigna mungo HOM05D004114 ORTHO05D004667 8.6e-213 744.2 653 60.9
MSTRG.12468 Avicennia marina HOM05D004114 ORTHO05D004667 1.1e-212 743.8 670 59.6
FAN11G0384 Fragaria x ananassa HOM05D004114 ORTHO05D004667 2.5e-212 742.7 631 62.1
AUR62000120 Chenopodium quinoa HOM05D004114 ORTHO05D004667 3.3e-212 742.3 657 59.4
arahy.Tifrunner.gnm1.ann1.JLH2AW Arachis hypogaea HOM05D004114 ORTHO05D004667 1.6e-211 740.0 651 60.7
arahy.Tifrunner.gnm1.ann1.V027MD Arachis hypogaea HOM05D004114 ORTHO05D004667 1.6e-211 740.0 651 60.8
Hund07507 Selenicereus undatus HOM05D004114 ORTHO05D004667 1.6e-211 740.0 641 61.0
Sp1g38010 Schrenkiella parvula HOM05D004114 ORTHO05D004667 1.1e-210 737.3 648 58.5
Cc00_g05950 Coffea canephora HOM05D004114 ORTHO05D004667 3.1e-210 735.7 668 58.8
Peaxi162Scf00004g00237 Petunia axillaris HOM05D004114 ORTHO05D004667 3.1e-210 735.7 670 58.8
FAN21G1677 Fragaria x ananassa HOM05D004114 ORTHO05D004667 2.2e-208 729.6 631 61.6
Thhalv10011291m.g Eutrema salsugineum HOM05D004114 ORTHO05D004667 4.9e-208 728.4 648 58.0
AT1G51350 Arabidopsis thaliana HOM05D004114 ORTHO05D004667 1.1e-207 727.2 645 58.0
arahy.Tifrunner.gnm1.ann1.4V7EDQ Arachis hypogaea HOM05D004114 ORTHO05D004667 1.4e-207 726.9 591 63.8
Solyc11g065750.2 Solanum lycopersicum HOM05D004114 ORTHO05D004667 4.1e-207 725.3 677 58.5
Sopen11g025510 Solanum pennellii HOM05D004114 ORTHO05D004667 9.2e-207 724.2 671 58.7
AL1G59170 Arabidopsis lyrata HOM05D004114 ORTHO05D004667 1.2e-206 723.8 648 57.1
PGR119G0430 Punica granatum HOM05D004114 ORTHO05D004667 2.1e-206 723.0 663 58.8
Duzib168G0105 Durio zibethinus HOM05D004114 ORTHO05D004667 2.7e-206 722.6 661 59.0
Lalb_Chr18g0050571 Lupinus albus HOM05D004114 ORTHO05D004667 3.5e-206 722.2 637 60.8
ClCG03G013250 Citrullus lanatus HOM05D004114 ORTHO05D004667 6.0e-206 721.5 652 58.9
Ah.06g194200 Amaranthus hybridus HOM05D004114 ORTHO05D004667 3.0e-205 719.2 651 57.8
Aa31LG10G3520 Aethionema arabicum HOM05D004114 ORTHO05D004667 6.6e-205 718.0 652 56.4
Carub.0001s4022 Capsella rubella HOM05D004114 ORTHO05D004667 6.6e-205 718.0 646 57.9
SalBow6G3263 Salvia bowleyana HOM05D004114 ORTHO05D004667 8.6e-205 717.6 714 56.3
Psat2g005360 Pisum sativum HOM05D004114 ORTHO05D004667 1.5e-204 716.8 686 56.4
Migut.D00601 Erythranthe guttata HOM05D004114 ORTHO05D004667 5.6e-204 714.9 664 56.8
BraA06t23464Z Brassica rapa HOM05D004114 ORTHO05D004667 7.3e-204 714.5 644 57.3
BcaB07g33582 Brassica carinata HOM05D004114 ORTHO05D004667 9.5e-204 714.1 644 56.8
Nitab4.5_0001587g0080 Nicotiana tabacum HOM05D004114 ORTHO05D004667 2.8e-203 712.6 655 58.9
HanXRQChr07g0197461 Helianthus annuus HOM05D004114 ORTHO05D004667 4.7e-203 711.8 662 56.8
CARHR041420 Cardamine hirsuta HOM05D004114 ORTHO05D004667 8.1e-203 711.1 645 56.9
BcaC08g43302 Brassica carinata HOM05D004114 ORTHO05D004667 1.1e-202 710.7 646 56.8
BolC6t35762H Brassica oleracea HOM05D004114 ORTHO05D004667 1.1e-202 710.7 646 56.8
Sed0020827 Sechium edule HOM05D004114 ORTHO05D004667 1.8e-202 709.9 621 61.2
SGA_v2.0_scaffold42G16101 Striga asiatica HOM05D004114 ORTHO05D004667 8.9e-202 707.6 678 56.6
A06p02560 Brassica napus HOM05D004114 ORTHO05D004667 1.4e-199 700.3 636 57.1
C06p06490 Brassica napus HOM05D004114 ORTHO05D004667 4.6e-198 695.3 638 56.4
Lsat_1_v5_gn_2_97760 Lactuca sativa HOM05D004114 ORTHO05D004667 1.3e-197 693.7 658 57.4
EL10Ac4g10249 Beta vulgaris HOM05D004114 ORTHO05D004667 4.3e-196 688.7 657 56.9
TWI60G1569 Tripterygium wilfordii HOM05D004114 ORTHO05D004667 9.5e-196 687.6 657 56.9
ATR0332G053 Amborella trichopoda HOM05D004114 ORTHO05D004667 8.9e-194 681.0 638 58.5
FAN25G0168 Fragaria x ananassa HOM05D004114 ORTHO05D004667 1.5e-193 680.2 682 55.3
CDE05G0406 Ceratophyllum demersum HOM05D004114 ORTHO05D004667 2.6e-193 679.5 655 56.2
Oeu063322.2 Olea europaea HOM05D004114 ORTHO05D004667 9.9e-193 677.6 651 55.6
EL10Ac4g10252 Beta vulgaris HOM05D004114 ORTHO05D004667 2.9e-192 676.0 657 56.9
unitig_699.g19135 Utricularia gibba HOM05D004114 ORTHO05D004667 2.1e-190 669.8 666 54.2
CiPaw.13G160800 Carya illinoinensis HOM05D004114 ORTHO05D004667 1.1e-188 664.1 560 62.9
Ciclev10014795m.g Citrus clementina HOM05D004114 ORTHO05D004667 8.1e-187 657.9 543 64.1
HPP92_020382 Vanilla planifolia HOM05D004114 ORTHO05D004667 3.2e-183 646.0 653 54.4
Oeu043295.1 Olea europaea HOM05D004114 ORTHO05D004667 3.1e-178 629.4 576 59.9
SEGI_01130 Sequoiadendron giganteum HOM05D004114 ORTHO05D004667 7.6e-177 624.8 651 53.5
ECA238G2774 Erigeron canadensis HOM05D004114 ORTHO05D004667 6.4e-176 621.7 659 53.3
Haze_23137 Corylus avellana HOM05D004114 ORTHO05D004667 5.4e-175 618.6 606 57.3
Zm00001eb115370 Zea mays HOM05D004114 ORTHO05D004667 4.6e-174 615.5 626 52.7
AUR62019301 Chenopodium quinoa HOM05D004114 ORTHO05D004667 1.4e-170 604.0 538 58.0
Nitab4.5_0002741g0170 Nicotiana tabacum HOM05D004114 ORTHO05D004667 3.8e-168 595.9 564 58.2
Eucgr.J00767 Eucalyptus grandis HOM05D004114 ORTHO05D004667 1.1e-167 594.3 533 58.0
CAN.G599.3 Capsicum annuum HOM05D004114 ORTHO05D004667 2.1e-163 580.1 517 59.0
Mapoly0179s0020 Marchantia polymorpha HOM05D004114 ORTHO05D004667 4.2e-159 565.8 650 48.0
TAR636G2716 Trochodendron aralioides HOM05D004114 ORTHO05D004667 1.4e-154 550.8 401 72.1
Pp3c15_7590 Physcomitrium patens HOM05D004114 ORTHO05D004667 2.9e-152 543.1 651 47.9
Zm00001eb166150 Zea mays HOM05D004114 ORTHO05D004667 3.2e-151 539.7 626 48.4
Pp3c9_10010 Physcomitrium patens HOM05D004114 ORTHO05D004667 3.9e-149 532.7 657 45.8
SMO347G0278 Selaginella moellendorffii HOM05D004114 ORTHO05D004667 6.9e-146 521.9 647 46.8
AagrBONN_evm.TU.Sc2ySwM_340.1837 Anthoceros agrestis HOM05D004114 ORTHO05D004667 1.3e-144 517.7 651 44.1
Cpa.g.sc84.54 Carica papaya HOM05D004114 ORTHO05D004667 7.0e-130 468.8 434 58.1
Lj1A330G26 Lonicera japonica HOM05D004114 ORTHO05D004667 3.4e-124 449.9 398 62.8
Psat3g081440 Pisum sativum HOM05D004114 ORTHO05D004667 2.4e-114 417.2 385 57.4
Actinidia06341 Actinidia chinensis HOM05D004114 ORTHO05D004667 6.8e-85 319.3 249 66.7
BcaC01g01258 Brassica carinata HOM05D004114 ORTHO05D004667 4.6e-81 306.6 371 47.7
Lj1A330G24 Lonicera japonica HOM05D004114 ORTHO05D004667 1.7e-80 304.7 250 62.8
TAR636G0924 Trochodendron aralioides HOM05D004114 ORTHO05D004667 1.8e-77 294.7 207 75.8
CBR_g56096 Chara braunii HOM05D004114 ORTHO05D004667 1.4e-74 285.0 432 41.9
Psat4g064240 Pisum sativum HOM05D004114 ORTHO05D004667 1.5e-71 275.0 428 41.1
Psat3g081480 Pisum sativum HOM05D003675 ORTHO05D004318 2.7e-65 254.2 234 57.7
Cpa.g.sc84.55 Carica papaya HOM05D004114 ORTHO05D004667 5.6e-55 219.9 195 61.0
C03p89880 Brassica napus HOM05D004114 ORTHO05D004667 9.6e-55 219.2 387 38.2
BolC3t21309H Brassica oleracea HOM05D004114 ORTHO05D004667 6.2e-54 216.5 369 40.1
arahy.Tifrunner.gnm1.ann1.MJQJ0M Arachis hypogaea HOM05D004114 ORTHO05D004667 4.2e-50 203.8 201 55.7
Os11g0638900 Oryza sativa ssp. japonica HOM05D004114 ORTHO05D004667 7.9e-49 199.5 171 57.3
BcaC08g43303 Brassica carinata HOM05D004114 ORTHO05D004667 2.5e-47 194.5 363 39.1
Psat5g252640 Pisum sativum HOM05D004114 ORTHO05D004667 3.2e-42 177.6 251 43.4
C03p89900 Brassica napus HOM05D004114 ORTHO05D004667 6.1e-41 173.3 306 38.9
BraA08t32330Z Brassica rapa HOM05D004114 ORTHO05D004667 7.4e-39 166.4 258 40.3
FAN23G2589 Fragaria x ananassa HOM05D004114 ORTHO05D004667 4.1e-37 160.6 158 57.6
arahy.Tifrunner.gnm1.ann1.HDR10P Arachis hypogaea HOM05D004114 ORTHO05D004667 3.6e-33 147.5 187 46.0
Cre16.g664750 Chlamydomonas reinhardtii HOM05D004114 ORTHO05D004667 4.3e-31 140.6 629 25.6
Actinidia39399 Actinidia chinensis HOM05D004114 ORTHO05D004667 1.2e-28 132.5 236 40.3
Oeu054838.1 Olea europaea HOM05D004114 ORTHO05D004667 1.2e-28 132.5 110 61.8
Actinidia06340 Actinidia chinensis HOM05D004114 ORTHO05D004667 2.2e-27 128.3 118 61.0
Haze_23136 Corylus avellana HOM05D004114 ORTHO05D004667 1.9e-26 125.2 99 56.6
FvH4_1g30480 Fragaria vesca HOM05D001826 ORTHO05D015538 1.3e-22 112.5 109 55.0
FAN26G0366 Fragaria x ananassa HOM05D004114 ORTHO05D004667 1.7e-19 102.1 132 47.0
FAN06G1142 Fragaria x ananassa HOM05D004114 ORTHO05D004667 8.5e-19 99.8 132 47.0
FAN19G0092 Fragaria x ananassa HOM05D004114 ORTHO05D004667 1.9e-18 98.6 134 45.5
FvH4_7g05120 Fragaria vesca HOM05D004114 ORTHO05D004667 1.0e-16 92.8 88 55.7
FvH4_1g27340 Fragaria vesca HOM05D004114 ORTHO05D004667 1.8e-16 92.0 88 55.7
FvH4_1g27570 Fragaria vesca HOM05D004114 ORTHO05D004667 2.3e-16 91.7 80 57.5
FAN19G1745 Fragaria x ananassa HOM05D004114 ORTHO05D004667 5.2e-16 90.5 67 64.2
Sabra16G0157900 Salix brachista HOM05D004114 ORTHO05D004667 2.0e-15 88.6 73 63.0
FAN28G1325 Fragaria x ananassa HOM05D004114 ORTHO05D004667 2.6e-15 88.2 69 59.4
C03p89890 Brassica napus HOM05D004114 ORTHO05D004667 1.4e-13 82.4 61 59.0
Psat1g158360 Pisum sativum HOM05D000344 ORTHO05D025701 5.5e-10 70.5 68 51.5
arahy.Tifrunner.gnm1.ann1.KKW1YJ Arachis hypogaea HOM05D004114 ORTHO05D004667 2.7e-09 68.2 67 58.2
EL10Ac3g06409 Beta vulgaris HOM05D004114 ORTHO05D004667 2.7e-09 68.2 54 51.9
Dinv18208 Davidia involucrata HOM05D000103 ORTHO05D000049 8.0e-09 66.6 41 73.2
BcaB04g17225 Brassica carinata HOM05D004114 ORTHO05D004667 1.0e-08 66.2 54 59.3
Zm00001eb110990 Zea mays HOM05D000534 ORTHO05D000389 3.0e-08 64.7 64 53.1
arahy.Tifrunner.gnm1.ann1.LY7CXU Arachis hypogaea HOM05D004114 ORTHO05D004667 1.5e-07 62.4 64 48.4
A08p02990 Brassica napus HOM05D004114 ORTHO05D004667 1.5e-07 62.4 73 47.9
arahy.Tifrunner.gnm1.ann1.WKB59G Arachis hypogaea HOM05D004114 ORTHO05D004667 2.2e-06 58.5 64 45.3
C03p89870 Brassica napus HOM05D004114 ORTHO05D004667 3.7e-06 57.8 50 58.0


User provided reference genes

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