Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 1.3e-70 269.6 135 100.0
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.1e-66 256.5 135 95.6
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.2e-38 162.5 125 65.6
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.8e-38 161.8 119 68.9
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 2.7e-36 155.6 113 69.0
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 2.7e-36 155.6 94 79.8
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 3.5e-36 155.2 140 60.7
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 6.0e-36 154.5 103 73.8
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 6.0e-36 154.5 139 61.9
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 6.0e-36 154.5 136 58.1
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 7.8e-36 154.1 106 70.8
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 7.8e-36 154.1 139 59.7
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 1.0e-35 153.7 95 77.9
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 1.3e-35 153.3 92 78.3
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 1.3e-35 153.3 138 59.4
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.7e-35 152.9 135 58.5
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.7e-35 152.9 96 77.1
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.3e-35 152.5 94 77.7
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 2.3e-35 152.5 105 70.5
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 3.0e-35 152.1 137 60.6
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 3.0e-35 152.1 135 59.3
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 3.0e-35 152.1 136 57.4
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 3.9e-35 151.8 136 61.0
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 5.1e-35 151.4 96 76.0
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 8.6e-35 150.6 138 56.5
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.5e-34 149.8 95 72.6
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.5e-34 149.8 128 61.7
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.5e-34 149.8 83 81.9
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 1.5e-34 149.8 113 66.4
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 1.9e-34 149.4 137 57.7
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 1.9e-34 149.4 106 69.8
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 2.5e-34 149.1 135 58.5
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 2.5e-34 149.1 127 64.6
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 3.3e-34 148.7 95 77.9
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 4.3e-34 148.3 96 72.9
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 4.3e-34 148.3 141 57.4
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 5.6e-34 147.9 96 75.0
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 5.6e-34 147.9 93 76.3
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 5.6e-34 147.9 144 56.2
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 7.3e-34 147.5 93 75.3
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 7.3e-34 147.5 123 63.4
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 7.3e-34 147.5 104 69.2
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 7.3e-34 147.5 102 71.6
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 9.6e-34 147.1 94 76.6
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.2e-33 146.7 113 65.5
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.6e-33 146.4 126 61.9
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.6e-33 146.4 107 65.4
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.6e-33 146.4 138 60.1
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 2.1e-33 146.0 110 66.4
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 2.1e-33 146.0 82 81.7
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 2.1e-33 146.0 130 60.8
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 2.8e-33 145.6 95 72.6
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 2.8e-33 145.6 91 73.6
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 2.8e-33 145.6 87 78.2
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 3.6e-33 145.2 106 67.9
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 3.6e-33 145.2 91 74.7
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 4.7e-33 144.8 133 57.9
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 4.7e-33 144.8 133 57.9
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 4.7e-33 144.8 82 80.5
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 4.7e-33 144.8 94 73.4
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 4.7e-33 144.8 128 63.3
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 6.2e-33 144.4 103 68.9
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 6.2e-33 144.4 103 68.9
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 6.2e-33 144.4 89 76.4
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 6.2e-33 144.4 134 57.5
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 1.1e-32 143.7 96 70.8
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 1.1e-32 143.7 96 70.8
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 1.1e-32 143.7 106 67.0
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.1e-32 143.7 93 74.2
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 1.4e-32 143.3 139 56.1
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.4e-32 143.3 92 75.0
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.4e-32 143.3 94 71.3
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 1.8e-32 142.9 95 71.6
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 2.4e-32 142.5 135 55.6
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 2.4e-32 142.5 95 71.6
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 2.4e-32 142.5 129 58.1
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 2.4e-32 142.5 127 59.1
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.1e-32 142.1 95 70.5
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.1e-32 142.1 95 70.5
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 3.1e-32 142.1 84 78.6
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 3.1e-32 142.1 132 54.5
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 4.0e-32 141.7 95 70.5
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.0e-32 141.7 95 70.5
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 4.0e-32 141.7 96 68.8
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.9e-32 141.0 95 70.5
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 8.9e-32 140.6 128 58.6
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 8.9e-32 140.6 109 65.1
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 8.9e-32 140.6 92 72.8
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 1.5e-31 139.8 132 53.8
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 3.4e-31 138.7 95 67.4
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 5.8e-31 137.9 84 72.6
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 5.8e-31 137.9 84 76.2
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 9.9e-31 137.1 95 71.6
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.7e-30 136.3 103 66.0
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 2.9e-30 135.6 89 71.9
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 2.9e-30 135.6 83 77.1
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 3.8e-30 135.2 92 70.7
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 4.9e-30 134.8 91 70.3
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 6.4e-30 134.4 88 70.5
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.0e-27 127.1 87 71.3
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 3.9e-27 125.2 129 54.3
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 5.6e-26 121.3 89 67.4
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 3.9e-19 98.6 99 56.6
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 4.8e-17 91.7 84 54.8
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 3.4e-15 85.5 46 82.6
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 2.1e-09 66.2 95 44.2
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 1.7e-06 56.6 39 66.7


User provided reference genes

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