Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 8.6e-96 353.6 172 100.0
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 2.0e-92 342.4 173 97.1
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 2.4e-53 212.6 130 73.1
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 2.4e-53 212.6 130 73.1
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 6.9e-53 211.1 130 72.3
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 1.5e-52 209.9 130 72.3
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 2.0e-52 209.5 128 71.1
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 2.0e-52 209.5 130 71.5
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 4.5e-52 208.4 129 73.6
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 1.3e-51 206.8 130 70.8
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 1.3e-51 206.8 130 71.5
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.3e-51 206.8 130 71.5
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.3e-51 206.8 130 71.5
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.3e-51 206.8 172 59.3
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 1.7e-51 206.5 130 71.5
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 2.2e-51 206.1 137 68.6
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 2.2e-51 206.1 132 69.7
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 2.9e-51 205.7 130 70.8
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 3.8e-51 205.3 130 68.5
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 4.9e-51 204.9 130 70.8
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 6.4e-51 204.5 130 68.5
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 8.4e-51 204.1 131 70.2
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 8.4e-51 204.1 129 72.1
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 1.1e-50 203.8 130 70.8
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.1e-50 203.8 130 70.0
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 1.4e-50 203.4 129 69.8
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 1.4e-50 203.4 130 70.0
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 1.9e-50 203.0 130 68.5
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 2.4e-50 202.6 131 71.0
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 4.2e-50 201.8 130 68.5
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 4.2e-50 201.8 130 68.5
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 5.4e-50 201.4 130 69.2
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 5.4e-50 201.4 130 71.5
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 7.1e-50 201.1 130 68.5
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 9.3e-50 200.7 130 69.2
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 9.3e-50 200.7 130 68.5
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 9.3e-50 200.7 130 68.5
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 9.3e-50 200.7 130 67.7
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 9.3e-50 200.7 130 70.0
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 1.2e-49 200.3 130 70.8
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 1.6e-49 199.9 131 68.7
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 1.6e-49 199.9 130 68.5
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 2.1e-49 199.5 162 60.5
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 2.1e-49 199.5 129 69.0
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 2.7e-49 199.1 130 70.0
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 2.7e-49 199.1 130 68.5
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 2.7e-49 199.1 129 67.4
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 4.6e-49 198.4 130 66.9
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 6.0e-49 198.0 130 69.2
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.0e-48 197.2 129 68.2
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 1.0e-48 197.2 130 67.7
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 1.3e-48 196.8 130 69.2
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.3e-48 196.8 130 67.7
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.3e-48 196.8 130 67.7
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 1.3e-48 196.8 130 66.2
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 2.3e-48 196.1 130 66.9
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 3.0e-48 195.7 130 66.9
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 5.1e-48 194.9 130 67.7
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 5.1e-48 194.9 129 67.4
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 6.7e-48 194.5 130 66.2
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 6.7e-48 194.5 130 66.2
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 6.7e-48 194.5 131 66.4
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 2.5e-47 192.6 130 67.7
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 2.5e-47 192.6 130 66.9
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 4.3e-47 191.8 132 65.9
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 5.6e-47 191.4 130 66.2
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 7.4e-47 191.0 132 68.2
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 7.4e-47 191.0 132 68.2
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 9.6e-47 190.7 130 66.9
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 9.6e-47 190.7 129 65.9
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 1.3e-46 190.3 129 67.4
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.3e-46 190.3 132 67.4
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 1.1e-45 187.2 130 63.8
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 1.4e-45 186.8 130 64.6
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 4.0e-45 185.3 173 52.0
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 4.0e-45 185.3 130 64.6
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 5.3e-45 184.9 130 63.8
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 1.2e-44 183.7 130 63.8
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 1.5e-44 183.3 134 65.7
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.0e-44 183.0 129 62.8
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 2.2e-43 179.5 132 65.9
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 6.4e-43 177.9 131 61.8
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.4e-42 176.8 130 58.5
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.4e-42 176.0 131 61.1
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 3.2e-42 175.6 128 61.7
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 4.2e-42 175.3 131 60.3
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 4.2e-42 175.3 131 59.5
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 4.2e-42 175.3 131 59.5
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 7.1e-42 174.5 129 62.0
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 7.1e-42 174.5 131 61.1
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 7.1e-42 174.5 131 58.0
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 2.1e-41 172.9 131 58.8
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 2.1e-41 172.9 131 58.8
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 2.1e-41 172.9 131 58.8
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 3.5e-41 172.2 131 59.5
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 3.5e-41 172.2 130 60.8
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 4.6e-41 171.8 131 60.3
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 6.0e-41 171.4 119 64.7
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 1.0e-40 170.6 131 58.8
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 3.0e-40 169.1 133 60.2
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 8.7e-40 167.5 131 57.3
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 1.6e-38 163.3 128 57.8
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 2.1e-38 162.9 129 58.1
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 6.2e-38 161.4 133 54.1
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 2.4e-37 159.5 130 56.2
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 9.0e-37 157.5 224 39.3
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.2e-36 157.1 136 51.5
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 2.6e-36 156.0 153 54.2
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 5.8e-36 154.8 127 54.3
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 3.2e-34 149.1 128 51.6
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 3.5e-33 145.6 82 75.6
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 1.5e-31 140.2 80 75.0
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 4.3e-31 138.7 82 73.2
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 9.7e-31 137.5 102 58.8
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 4.2e-26 122.1 129 49.6
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 9.7e-23 110.9 75 62.7
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 6.3e-22 108.2 65 69.2
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 3.8e-19 99.0 56 66.1
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 9.4e-18 94.4 119 43.7
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 5.1e-16 88.6 72 63.9
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.7e-11 73.6 54 61.1
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.5e-10 69.7 48 64.6
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 2.1e-09 66.6 48 66.7
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 4.7e-09 65.5 48 64.6
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 2.2e-06 56.6 42 64.3


User provided reference genes

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