Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0401 Papaver somniferum HOM05D004212 ORTHO05D005128 1.2e-164 583.2 303 100.0
PSO384G5122 Papaver somniferum HOM05D004212 ORTHO05D005128 3.1e-157 558.5 303 94.1
Aqoxy4G03223 Aquilegia oxysepala HOM05D004212 ORTHO05D005128 3.9e-83 312.4 306 53.9
Aqoxy7G01126 Aquilegia oxysepala HOM05D004212 ORTHO05D005128 2.5e-82 309.7 303 53.8
TAR633G1640 Trochodendron aralioides HOM05D004212 ORTHO05D005128 2.8e-73 279.6 306 52.9
GSVIVG01034068001 Vitis vinifera HOM05D004212 ORTHO05D005128 1.1e-72 277.7 299 51.8
Nn2g11289 Nelumbo nucifera HOM05D004212 ORTHO05D005128 3.4e-71 272.7 305 51.5
CiPaw.09G201200 Carya illinoinensis HOM05D004212 ORTHO05D005128 9.9e-71 271.2 310 51.3
Ca_07566_v3 Cicer arietinum L. HOM05D004212 ORTHO05D005128 2.4e-69 266.5 318 48.1
CANSAT35G0035 Cannabis sativa HOM05D004212 ORTHO05D005128 6.0e-68 261.9 306 51.0
Thecc.05G029300 Theobroma cacao HOM05D004212 ORTHO05D005128 6.0e-68 261.9 303 48.5
CDE02G2360 Ceratophyllum demersum HOM05D004212 ORTHO05D005128 7.8e-68 261.5 308 48.7
Oeu001834.1 Olea europaea HOM05D004212 ORTHO05D005128 7.8e-68 261.5 317 49.5
TWI53G1663 Tripterygium wilfordii HOM05D004212 ORTHO05D005128 1.3e-67 260.8 323 48.0
RcHm_v2.0_Chr4g0406841 Rosa chinensis HOM05D004212 ORTHO05D005128 3.9e-67 259.2 311 50.2
Migut.J00264 Erythranthe guttata HOM05D004212 ORTHO05D005128 5.1e-67 258.8 313 49.2
Psat3g133560 Pisum sativum HOM05D004212 ORTHO05D005128 1.1e-66 257.7 315 48.6
HPP92_005893 Vanilla planifolia HOM05D004212 ORTHO05D005128 1.5e-66 257.3 309 48.2
Cc06_g02090 Coffea canephora HOM05D004212 ORTHO05D005128 5.6e-66 255.4 306 51.6
Lj1g0008590 Lotus japonicus HOM05D004212 ORTHO05D005128 5.6e-66 255.4 316 48.4
DCAR_028811 Daucus carota HOM05D004212 ORTHO05D005128 1.2e-65 254.2 310 49.0
Cfa010180 Carpinus fangiana HOM05D004212 ORTHO05D005128 4.7e-65 252.3 313 47.9
ClCG04G007620 Citrullus lanatus HOM05D004212 ORTHO05D005128 6.2e-65 251.9 328 47.6
Nitab4.5_0008116g0030 Nicotiana tabacum HOM05D004212 ORTHO05D005128 6.2e-65 251.9 309 49.8
FAN12G3486 Fragaria x ananassa HOM05D004212 ORTHO05D005128 8.1e-65 251.5 307 49.5
Gohir.D01G209900 Gossypium hirsutum HOM05D004212 ORTHO05D005128 1.4e-64 250.8 309 46.3
Gorai.002G255500 Gossypium raimondii HOM05D004212 ORTHO05D005128 1.4e-64 250.8 309 46.3
FAN12G2442 Fragaria x ananassa HOM05D004212 ORTHO05D005128 2.4e-64 250.0 307 49.2
TPR.G34923 Trifolium pratense HOM05D004212 ORTHO05D005128 3.1e-64 249.6 320 47.2
Haze_20882 Corylus avellana HOM05D004212 ORTHO05D005128 4.0e-64 249.2 340 46.2
Glyma.09G059100 Glycine max HOM05D004212 ORTHO05D005128 4.0e-64 249.2 310 49.0
Aa31LG10G8930 Aethionema arabicum HOM05D004212 ORTHO05D005128 5.2e-64 248.8 309 49.5
Gohir.A01G221000 Gossypium hirsutum HOM05D004212 ORTHO05D005128 6.8e-64 248.4 309 47.2
Lalb_Chr19g0125041 Lupinus albus HOM05D004212 ORTHO05D005128 6.8e-64 248.4 312 47.8
Peaxi162Scf00975g00132 Petunia axillaris HOM05D004212 ORTHO05D005128 8.9e-64 248.1 306 50.0
Haze_20891 Corylus avellana HOM05D004212 ORTHO05D005128 1.2e-63 247.7 340 45.9
TWI74G0733 Tripterygium wilfordii HOM05D004212 ORTHO05D005128 1.2e-63 247.7 323 47.1
Medtr7g065120 Medicago truncatula HOM05D004212 ORTHO05D005128 1.5e-63 247.3 312 47.1
Sopen09g006170 Solanum pennellii HOM05D004212 ORTHO05D005128 2.6e-63 246.5 316 48.7
MELO3C003185.2 Cucumis melo HOM05D004212 ORTHO05D005128 3.4e-63 246.1 321 46.7
CsaV3_4G025590 Cucumis sativus L. HOM05D004212 ORTHO05D005128 3.4e-63 246.1 318 45.9
Lalb_Chr03g0042691 Lupinus albus HOM05D004212 ORTHO05D005128 4.4e-63 245.7 312 46.8
PSO421G0231 Papaver somniferum HOM05D004212 ORTHO05D005128 5.8e-63 245.4 157 80.3
AT3G53970 Arabidopsis thaliana HOM05D004212 ORTHO05D005128 9.9e-63 244.6 308 46.8
Solyc09g011450.4 Solanum lycopersicum HOM05D004212 ORTHO05D005128 9.9e-63 244.6 310 48.7
PSO104G0005 Papaver somniferum HOM05D004212 ORTHO05D005128 1.3e-62 244.2 173 74.6
PSO104G0021 Papaver somniferum HOM05D004212 ORTHO05D005128 1.3e-62 244.2 158 78.5
Sc22g0004390 Simmondsia chinensis HOM05D004212 ORTHO05D005128 1.7e-62 243.8 296 48.3
FAN07G0792 Fragaria x ananassa HOM05D004212 ORTHO05D005128 2.2e-62 243.4 308 48.4
PSO104G0091 Papaver somniferum HOM05D004212 ORTHO05D005128 2.9e-62 243.0 173 74.6
Sed0021611 Sechium edule HOM05D004212 ORTHO05D005128 2.9e-62 243.0 319 46.1
Carub.0005s2056 Capsella rubella HOM05D004212 ORTHO05D005128 3.8e-62 242.7 311 48.2
Manes.09G098300 Manihot esculenta HOM05D004212 ORTHO05D005128 1.4e-61 240.7 316 48.1
Phvul.006G149300 Phaseolus vulgaris HOM05D004212 ORTHO05D005128 2.4e-61 240.0 310 46.5
Atru.chr8.2089 Acer truncatum HOM05D004212 ORTHO05D005128 3.2e-61 239.6 303 46.9
AL5G34970 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 4.1e-61 239.2 308 45.8
PGSC0003DMG400024265 Solanum tuberosum HOM05D004212 ORTHO05D005128 7.1e-61 238.4 333 47.7
THA.LOC104806541 Tarenaya hassleriana HOM05D004212 ORTHO05D005128 7.1e-61 238.4 321 46.7
Potri.016G103800 Populus trichocarpa HOM05D004212 ORTHO05D005128 9.2e-61 238.0 313 46.6
Prupe.6G264400 Prunus persica HOM05D004212 ORTHO05D005128 9.2e-61 238.0 312 47.4
Glyma.15G165200 Glycine max HOM05D004212 ORTHO05D005128 1.2e-60 237.7 309 47.2
arahy.Tifrunner.gnm1.ann1.PUF7HK Arachis hypogaea HOM05D004212 ORTHO05D005128 1.6e-60 237.3 317 47.0
CARHR163870 Cardamine hirsuta HOM05D004212 ORTHO05D005128 2.1e-60 236.9 310 46.5
Eucgr.K03043 Eucalyptus grandis HOM05D004212 ORTHO05D005128 2.7e-60 236.5 306 45.4
MSTRG.10244 Avicennia marina HOM05D004212 ORTHO05D005128 7.8e-60 235.0 316 45.3
EL10Ac3g05638 Beta vulgaris HOM05D004212 ORTHO05D005128 1.3e-59 234.2 316 47.2
SalBow7G2619 Salvia bowleyana HOM05D004212 ORTHO05D005128 1.3e-59 234.2 309 46.6
arahy.Tifrunner.gnm1.ann1.MS11WY Arachis hypogaea HOM05D004212 ORTHO05D005128 3.0e-59 233.0 317 46.7
arahy.Tifrunner.gnm1.ann1.77ZQ01 Arachis hypogaea HOM05D004212 ORTHO05D005128 3.9e-59 232.6 314 46.2
unitig_62.g23469 Utricularia gibba HOM05D004212 ORTHO05D005128 6.6e-59 231.9 306 44.8
Sabra16G0103700 Salix brachista HOM05D004212 ORTHO05D005128 1.1e-58 231.1 319 46.7
arahy.Tifrunner.gnm1.ann1.59HWIF Arachis hypogaea HOM05D004212 ORTHO05D005128 1.5e-58 230.7 311 45.0
QL07p028338 Quercus lobata HOM05D004212 ORTHO05D005128 9.6e-58 228.0 289 47.1
VMungo0540G1009 Vigna mungo HOM05D004212 ORTHO05D005128 9.6e-58 228.0 310 45.5
COL.COLO4_14697 Corchorus olitorius HOM05D004212 ORTHO05D005128 1.2e-57 227.6 301 45.2
HanXRQChr04g0124481 Helianthus annuus HOM05D004212 ORTHO05D005128 1.2e-57 227.6 318 42.1
PGR004G1844 Punica granatum HOM05D004212 ORTHO05D005128 3.6e-57 226.1 320 44.4
MD04G1138800 Malus domestica HOM05D004212 ORTHO05D005128 4.7e-57 225.7 312 45.2
Lsat_1_v5_gn_8_84101 Lactuca sativa HOM05D004212 ORTHO05D005128 6.2e-57 225.3 316 43.4
AUR62021188 Chenopodium quinoa HOM05D004212 ORTHO05D005128 8.1e-57 224.9 314 45.5
Hund00715 Selenicereus undatus HOM05D004212 ORTHO05D005128 1.1e-56 224.6 306 44.8
Ciclev10012365m.g Citrus clementina HOM05D004212 ORTHO05D005128 1.8e-56 223.8 309 46.6
Ciclev10021036m.g Citrus clementina HOM05D004212 ORTHO05D005128 3.1e-56 223.0 300 46.7
vmacro20195 Vaccinium macrocarpon HOM05D004212 ORTHO05D005128 3.1e-56 223.0 318 45.3
ECA236G3305 Erigeron canadensis HOM05D004212 ORTHO05D005128 4.0e-56 222.6 317 42.9
Thhalv10010577m.g Eutrema salsugineum HOM05D004212 ORTHO05D005128 5.2e-56 222.2 316 47.8
arahy.Tifrunner.gnm1.ann1.SP0BHI Arachis hypogaea HOM05D004212 ORTHO05D005128 1.2e-55 221.1 293 47.1
ATR1134G026 Amborella trichopoda HOM05D004212 ORTHO05D005128 2.6e-55 219.9 306 45.8
MD12G1154600 Malus domestica HOM05D004212 ORTHO05D005128 1.7e-54 217.2 311 44.7
CSS0007767 Camellia sinensis var. sinensis HOM05D004212 ORTHO05D005128 2.2e-54 216.9 313 43.8
Mapoly0013s0005 Marchantia polymorpha HOM05D004212 ORTHO05D005128 4.9e-54 215.7 312 42.3
Hma1.2p1_0671F.1_g200560 Hydrangea macrophylla HOM05D004212 ORTHO05D005128 8.4e-54 214.9 309 45.6
Os07g0548900 Oryza sativa ssp. japonica HOM05D004212 ORTHO05D005128 4.2e-53 212.6 299 41.8
Duzib093G0395 Durio zibethinus HOM05D004212 ORTHO05D005128 5.4e-53 212.2 306 42.8
AUR62015980 Chenopodium quinoa HOM05D004212 ORTHO05D005128 3.5e-52 209.5 268 46.6
Zm00001eb323600 Zea mays HOM05D004212 ORTHO05D005128 4.3e-50 202.6 314 41.4
Dinv35542 Davidia involucrata HOM05D004212 ORTHO05D005128 2.4e-48 196.8 262 47.3
BcaB02g07758 Brassica carinata HOM05D004212 ORTHO05D005128 1.5e-47 194.1 305 43.6
Pp3c12_26190 Physcomitrium patens HOM05D004212 ORTHO05D005128 3.4e-47 193.0 307 40.1
Nn2g13527 Nelumbo nucifera HOM05D004212 ORTHO05D005128 2.2e-46 190.3 258 43.8
Rhsim05G0199700 Rhododendron simsii HOM05D004212 ORTHO05D005128 2.2e-46 190.3 319 42.0
BraA07t29869Z Brassica rapa HOM05D004212 ORTHO05D005128 4.9e-46 189.1 302 42.4
A07p21880 Brassica napus HOM05D004212 ORTHO05D005128 8.4e-46 188.3 302 42.4
BolC6t37364H Brassica oleracea HOM05D004212 ORTHO05D005128 2.4e-45 186.8 302 41.7
Sp5g08430 Schrenkiella parvula HOM05D004212 ORTHO05D005128 3.2e-45 186.4 306 42.8
BcaC08g44655 Brassica carinata HOM05D004212 ORTHO05D005128 4.2e-45 186.0 302 41.7
C06p21750 Brassica napus HOM05D004212 ORTHO05D005128 4.2e-45 186.0 302 41.7
FvH4_4g10740 Fragaria vesca HOM05D004212 ORTHO05D005128 5.4e-45 185.7 249 46.2
RcHm_v2.0_Chr3g0464661 Rosa chinensis HOM05D004212 ORTHO05D005128 9.3e-45 184.9 348 41.7
FAN05G0076 Fragaria x ananassa HOM05D004212 ORTHO05D005128 1.6e-44 184.1 332 43.1
FAN14G3630 Fragaria x ananassa HOM05D004212 ORTHO05D005128 2.1e-44 183.7 334 42.2
FvH4_6g12740 Fragaria vesca HOM05D004212 ORTHO05D005128 4.6e-44 182.6 329 42.2
Oeu021128.1 Olea europaea HOM05D004212 ORTHO05D005128 3.0e-43 179.9 394 34.5
Actinidia29168 Actinidia chinensis HOM05D004212 ORTHO05D005128 6.7e-43 178.7 314 42.7
SGA_v2.0_scaffold673G53429 Striga asiatica HOM05D004212 ORTHO05D005128 1.6e-41 174.1 237 46.8
SMO115G0073 Selaginella moellendorffii HOM05D004212 ORTHO05D005128 3.7e-41 172.9 287 39.0
SEGI_10222 Sequoiadendron giganteum HOM05D004212 ORTHO05D005128 2.0e-39 167.2 165 52.1
Lj4g0027540 Lotus japonicus HOM05D004212 ORTHO05D005128 4.5e-39 166.0 290 40.3
Lj2C86T9 Lonicera japonica HOM05D004212 ORTHO05D005128 4.9e-38 162.5 286 39.9
CBR_g46706 Chara braunii HOM05D004212 ORTHO05D005128 4.2e-37 159.5 359 37.6
CAN.G697.3 Capsicum annuum HOM05D004212 ORTHO05D005128 3.1e-32 143.3 183 48.1
BraA09t40156Z Brassica rapa HOM05D004212 ORTHO05D005128 3.4e-31 139.8 312 35.9
FAN09G1025 Fragaria x ananassa HOM05D004212 ORTHO05D005128 1.3e-30 137.9 147 49.0
RcHm_v2.0_Chr4g0419261 Rosa chinensis HOM05D004212 ORTHO05D005128 1.2e-28 131.3 232 39.2
A09p46880 Brassica napus HOM05D004212 ORTHO05D005128 1.3e-27 127.9 301 35.2
Carub.0003s2694 Capsella rubella HOM05D004212 ORTHO05D005128 1.3e-27 127.9 166 46.4
BcaB01g00227 Brassica carinata HOM05D004212 ORTHO05D005128 3.9e-27 126.3 250 38.0
AL3G43180 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 9.7e-26 121.7 171 44.4
Prupe.6G304800 Prunus persica HOM05D004212 ORTHO05D005128 9.7e-26 121.7 151 47.7
Hma1.2p1_0097F.1_g048000 Hydrangea macrophylla HOM05D004212 ORTHO05D005128 3.7e-25 119.8 118 55.9
MD12G1200000 Malus domestica HOM05D004212 ORTHO05D005128 6.3e-25 119.0 178 43.3
AT1G48530 Arabidopsis thaliana HOM05D004212 ORTHO05D005128 4.1e-24 116.3 169 42.6
arahy.Tifrunner.gnm1.ann1.U24FMU Arachis hypogaea HOM05D004212 ORTHO05D005128 5.3e-24 115.9 107 55.1
Lj3C960G5 Lonicera japonica HOM05D004212 ORTHO05D005128 1.2e-23 114.8 105 54.3
arahy.Tifrunner.gnm1.ann1.MGHR3Z Arachis hypogaea HOM05D004212 ORTHO05D005128 2.6e-23 113.6 104 55.8
AL3G43230 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 3.8e-22 109.8 172 43.6
C08p29190 Brassica napus HOM05D004212 ORTHO05D005128 6.5e-22 109.0 289 36.0
CAN.G697.2 Capsicum annuum HOM05D004212 ORTHO05D005128 6.5e-22 109.0 112 56.2
BolC8t50520H Brassica oleracea HOM05D004212 ORTHO05D005128 1.9e-21 107.5 289 35.6
BcaC07g39746 Brassica carinata HOM05D004212 ORTHO05D005128 4.2e-21 106.3 289 35.3
Duzib106G0220 Durio zibethinus HOM05D004212 ORTHO05D005128 4.2e-21 106.3 93 61.3
MD17G1162600 Malus domestica HOM05D004212 ORTHO05D005128 5.5e-21 105.9 162 41.4
BcaB02g08498 Brassica carinata HOM05D004212 ORTHO05D005128 2.1e-20 104.0 288 34.7
SEGI_17127 Sequoiadendron giganteum HOM05D004212 ORTHO05D005128 1.5e-18 97.8 93 58.1
RcHm_v2.0_Chr4g0416021 Rosa chinensis HOM05D004212 ORTHO05D005128 4.1e-16 89.7 147 39.5
BcaC02g09118 Brassica carinata HOM05D004212 ORTHO05D005128 1.4e-13 81.3 71 59.2
Cfa009861 Carpinus fangiana HOM05D004212 ORTHO05D005128 1.4e-13 81.3 256 30.1
TAR633G2132 Trochodendron aralioides HOM05D004212 ORTHO05D005128 3.6e-12 76.6 52 73.1
SGA_v2.0_scaffold96G28918 Striga asiatica HOM05D004212 ORTHO05D005128 2.6e-10 70.5 80 53.8
Cre07.g331000 Chlamydomonas reinhardtii HOM05D004212 ORTHO05D005128 3.3e-10 70.1 152 30.3
AagrBONN_evm.TU.Sc2ySwM_344.2315 Anthoceros agrestis HOM05D004212 ORTHO05D005128 5.7e-10 69.3 176 35.8
CARHR164030 Cardamine hirsuta HOM05D004212 ORTHO05D005128 9.1e-08 62.0 56 55.4
Lalb_Chr18g0052541 Lupinus albus HOM05D004212 ORTHO05D005128 7.7e-07 58.9 50 52.0
FAN02G2124 Fragaria x ananassa HOM05D004212 ORTHO05D005128 8.5e-06 55.5 102 42.2


User provided reference genes

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