Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0358 Papaver somniferum HOM05D035749 ORTHO05D037267 6.9e-156 553.9 276 100.0
PSO478G1624 Papaver somniferum HOM05D035749 ORTHO05D037267 1.4e-60 237.3 294 51.4
PSO017G7090 Papaver somniferum HOM05D035749 ORTHO05D037267 2.5e-57 226.5 308 47.7
Aqoxy7G02773 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 2.3e-18 97.1 299 30.4
TAR625G0700 Trochodendron aralioides HOM05D000307 ORTHO05D000166 6.7e-18 95.5 263 30.4
TAR362G1006 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.6e-17 93.6 262 29.8
TAR362G0570 Trochodendron aralioides HOM05D000307 ORTHO05D000166 3.3e-17 93.2 262 29.4
TAR362G0043 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.3e-16 91.3 262 29.0
TAR625G1049 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.2e-16 90.5 265 29.4
TAR625G0022 Trochodendron aralioides HOM05D000307 ORTHO05D000166 3.7e-16 89.7 226 30.1
TAR625G0088 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.8e-15 87.4 272 29.8
TAR625G0813 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.8e-15 87.4 146 37.7
TAR625G0923 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.9e-13 80.1 146 34.2
Aqoxy3G01774 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 3.8e-13 79.7 148 33.8
TAR362G1166 Trochodendron aralioides HOM05D000307 ORTHO05D000166 8.5e-13 78.6 208 30.8
TAR362G1158 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.5e-12 77.8 208 30.8
Nn4g24661 Nelumbo nucifera HOM05D000307 ORTHO05D000166 1.9e-12 77.4 286 26.6
PSO675G0191 Papaver somniferum HOM05D000307 ORTHO05D000166 1.9e-12 77.4 149 35.6
TAR362G0722 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.9e-12 77.4 212 32.1
PSO161G0058 Papaver somniferum HOM05D000307 ORTHO05D000166 3.2e-12 76.6 142 36.6
PSO541G0906 Papaver somniferum HOM05D000307 ORTHO05D000166 3.2e-12 76.6 149 36.2
TAR362G0056 Trochodendron aralioides HOM05D000307 ORTHO05D000166 3.2e-12 76.6 212 32.1
TAR381G0994 Trochodendron aralioides HOM05D000307 ORTHO05D000166 3.2e-12 76.6 146 32.2
PSO161G0127 Papaver somniferum HOM05D000307 ORTHO05D000166 5.5e-12 75.9 142 35.9
Haze_14188 Corylus avellana HOM05D000307 ORTHO05D000166 1.6e-11 74.3 146 33.6
MBI09_g18620_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 4.7e-11 72.8 201 27.9
Dinv15101 Davidia involucrata HOM05D000307 ORTHO05D000166 6.1e-11 72.4 271 25.8
Aqoxy5G00359 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 1.0e-10 71.6 143 32.9
Cfa007888 Carpinus fangiana HOM05D000307 ORTHO05D000166 1.0e-10 71.6 165 31.5
Nn5g28739 Nelumbo nucifera HOM05D000307 ORTHO05D000166 1.0e-10 71.6 150 32.0
Aqoxy5G00368 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 1.2e-09 68.2 152 31.6
Prupe.2G110900 Prunus persica HOM05D000307 ORTHO05D000166 2.0e-09 67.4 178 27.5
RhsimUnG0101700 Rhododendron simsii HOM05D000307 ORTHO05D000166 2.6e-09 67.0 185 27.0
Lj1g0022539 Lotus japonicus HOM05D008089 ORTHO05D000166 4.4e-09 66.2 232 24.6
Potri.012G109900 Populus trichocarpa HOM05D000307 ORTHO05D000166 5.7e-09 65.9 138 31.9
FAN27G3405 Fragaria x ananassa HOM05D000307 ORTHO05D000166 9.8e-09 65.1 279 24.7
FAN20G0315 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.3e-08 64.7 276 24.6
Potri.002G255700 Populus trichocarpa HOM05D000307 ORTHO05D000166 2.2e-08 63.9 138 30.4
CiPaw.03G065100 Carya illinoinensis HOM05D000307 ORTHO05D000166 2.8e-08 63.5 148 31.8
FvH4_6g53490 Fragaria vesca HOM05D000307 ORTHO05D000166 2.8e-08 63.5 135 29.6
FAN05G4713 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.8e-08 63.5 135 29.6
RcHm_v2.0_Chr2g0175531 Rosa chinensis HOM05D000307 ORTHO05D000166 2.8e-08 63.5 129 31.8
COL.COLO4_22397 Corchorus olitorius HOM05D000307 ORTHO05D000166 3.7e-08 63.2 209 26.8
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 3.7e-08 63.2 135 29.6
TAR624G0600 Trochodendron aralioides HOM05D000307 ORTHO05D000166 3.7e-08 63.2 145 28.3
FAN02G3985 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.8e-08 62.8 135 29.6
Prupe.3G148900 Prunus persica HOM05D000307 ORTHO05D000166 4.8e-08 62.8 131 31.3
Eucgr.H02504 Eucalyptus grandis HOM05D000307 ORTHO05D000166 6.3e-08 62.4 75 38.7
FAN09G4481 Fragaria x ananassa HOM05D000307 ORTHO05D000166 6.3e-08 62.4 135 29.6
Aqoxy1G01191 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 8.3e-08 62.0 152 31.6
FvH4_2g27520 Fragaria vesca HOM05D000307 ORTHO05D000166 8.3e-08 62.0 131 31.3
FAN15G0593 Fragaria x ananassa HOM05D000307 ORTHO05D000166 8.3e-08 62.0 131 31.3
FAN24G2406 Fragaria x ananassa HOM05D000307 ORTHO05D000166 8.3e-08 62.0 131 31.3
Prupe.7G031800 Prunus persica HOM05D000307 ORTHO05D000166 8.3e-08 62.0 161 29.8
Ciclev10009227m.g Citrus clementina HOM05D000307 ORTHO05D000166 1.4e-07 61.2 223 23.8
Hma1.2p1_0038F.1_g024040 Hydrangea macrophylla HOM05D000307 ORTHO05D000166 1.4e-07 61.2 273 25.6
Sabra02G0194300 Salix brachista HOM05D028904 ORTHO05D000166 1.4e-07 61.2 138 31.9
TAR365G0201 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.4e-07 61.2 129 31.8
CSS0029060 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 2.4e-07 60.5 243 26.7
Lj5g0004947 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-07 60.5 231 24.2
Lj5g0023944 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-07 60.5 231 24.2
RcHm_v2.0_Chr5g0016461 Rosa chinensis HOM05D000307 ORTHO05D000166 2.4e-07 60.5 129 31.0
arahy.Tifrunner.gnm1.ann1.P24S13 Arachis hypogaea HOM05D000307 ORTHO05D000166 3.1e-07 60.1 143 28.0
Actinidia09597 Actinidia chinensis HOM05D002537 ORTHO05D002751 4.1e-07 59.7 188 25.0
CSS0003566 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 4.1e-07 59.7 199 25.1
CSS0020770 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 4.1e-07 59.7 146 28.1
MD17G1250500 Malus domestica HOM05D000307 ORTHO05D000166 4.1e-07 59.7 131 30.5
CiPaw.04G087000 Carya illinoinensis HOM05D000307 ORTHO05D000166 5.4e-07 59.3 201 29.4
Prupe.7G032000 Prunus persica HOM05D000307 ORTHO05D000166 5.4e-07 59.3 161 30.4
TPR.G26403 Trifolium pratense HOM05D008089 ORTHO05D000166 5.4e-07 59.3 229 24.9
Eucgr.H02505 Eucalyptus grandis HOM05D000307 ORTHO05D000166 7.0e-07 58.9 165 30.9
CSS0022233 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 9.1e-07 58.5 140 28.6
Ca_13731_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 9.1e-07 58.5 158 24.7
TPR.G1441 Trifolium pratense HOM05D000307 ORTHO05D000166 9.1e-07 58.5 151 27.2
Medtr6g018920 Medicago truncatula HOM05D000307 ORTHO05D000166 1.2e-06 58.2 170 25.3
Prupe.7G030800 Prunus persica HOM05D000307 ORTHO05D000166 1.2e-06 58.2 159 29.6
Sp3g16720 Schrenkiella parvula HOM05D006887 ORTHO05D004325 1.2e-06 58.2 206 24.3
CSS0036324 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.6e-06 57.8 140 28.6
Eucgr.H02508 Eucalyptus grandis HOM05D000307 ORTHO05D000166 1.6e-06 57.8 69 37.7
Eucgr.K02593 Eucalyptus grandis HOM05D000307 ORTHO05D000166 1.6e-06 57.8 78 38.5
MD02G1297800 Malus domestica HOM05D000307 ORTHO05D000166 1.6e-06 57.8 131 29.8
Manes.03G020700 Manihot esculenta HOM05D000307 ORTHO05D000166 1.6e-06 57.8 148 28.4
Sabra16G0128300 Salix brachista HOM05D000307 ORTHO05D009271 1.6e-06 57.8 158 27.2
QL09p041547 Quercus lobata HOM05D000307 ORTHO05D000166 2.0e-06 57.4 145 29.7
CSS0029498 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 2.7e-06 57.0 151 27.2
Cpa.g.sc0.43 Carica papaya HOM05D000307 ORTHO05D000166 2.7e-06 57.0 151 29.8
Psat1g082000 Pisum sativum HOM05D000307 ORTHO05D000166 2.7e-06 57.0 145 24.8
Psat6g001960 Pisum sativum HOM05D000307 ORTHO05D000166 2.7e-06 57.0 207 23.7
ATR0626G033 Amborella trichopoda HOM05D000307 ORTHO05D000166 3.5e-06 56.6 139 30.2
Aqoxy6G02715 Aquilegia oxysepala HOM05D038623 ORTHO05D000166 3.5e-06 56.6 61 39.3
Aqoxy6G02728 Aquilegia oxysepala HOM05D038623 ORTHO05D000166 3.5e-06 56.6 61 39.3
CiPaw.04G086700 Carya illinoinensis HOM05D000307 ORTHO05D000166 3.5e-06 56.6 202 29.7
Ciclev10012506m.g Citrus clementina HOM05D000307 ORTHO05D000166 3.5e-06 56.6 160 24.4
Atru.chr8.2490 Acer truncatum HOM05D000307 ORTHO05D000166 4.5e-06 56.2 143 25.9
CARHR269010 Cardamine hirsuta HOM05D000307 ORTHO05D000166 4.5e-06 56.2 206 25.2
Thecc.01G119800 Theobroma cacao HOM05D000307 ORTHO05D000166 4.5e-06 56.2 152 26.3
CSS0008018 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 5.9e-06 55.8 143 25.2
CSS0019629 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 5.9e-06 55.8 143 25.2
Carub.0008s1606 Capsella rubella HOM05D000307 ORTHO05D000166 5.9e-06 55.8 131 30.5
Cc02_g23180 Coffea canephora HOM05D000307 ORTHO05D000166 7.7e-06 55.5 140 27.9
RcHm_v2.0_Chr6g0296351 Rosa chinensis HOM05D000307 ORTHO05D000166 7.7e-06 55.5 158 26.6


User provided reference genes

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