Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 9.4e-188 660.2 377 100.0
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.2e-182 643.3 377 92.3
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 2.6e-113 412.9 379 64.9
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 9.3e-111 404.4 377 63.9
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 3.3e-108 396.0 355 65.6
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.3e-107 394.0 364 64.0
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 2.8e-107 392.9 376 62.2
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.5e-105 387.1 371 63.6
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.9e-103 380.2 375 61.1
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 3.2e-103 379.4 388 60.6
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 7.1e-103 378.3 371 59.6
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.6e-102 377.1 368 61.1
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 3.5e-102 375.9 369 61.2
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 6.0e-102 375.2 378 59.0
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.0e-101 374.4 372 60.5
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.3e-101 374.0 370 58.9
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.3e-101 374.0 370 60.5
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 2.3e-101 373.2 375 60.3
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.3e-101 373.2 368 60.6
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.1e-101 372.1 370 60.3
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 1.9e-100 370.2 374 61.0
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 3.3e-100 369.4 377 60.7
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 3.3e-100 369.4 370 62.7
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.3e-99 367.5 365 63.0
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.6e-99 367.1 376 60.9
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.6e-99 367.1 370 60.5
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 3.7e-99 365.9 374 58.3
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 1.4e-98 364.0 370 59.7
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 5.3e-98 362.1 375 62.7
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 2.2e-96 356.7 378 59.8
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 2.9e-96 356.3 414 56.3
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 7.1e-95 351.7 350 61.1
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 9.3e-95 351.3 362 61.9
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.6e-94 350.5 370 60.0
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 2.7e-94 349.7 389 56.3
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 3.5e-94 349.4 365 57.8
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.3e-93 347.4 349 61.3
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 8.7e-93 344.7 396 57.3
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 2.5e-92 343.2 363 59.8
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 4.3e-92 342.4 365 57.8
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.1e-90 337.8 365 54.8
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.8e-90 337.0 365 56.4
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 2.4e-90 336.7 371 54.7
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 2.4e-90 336.7 391 55.8
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 9.0e-90 334.7 373 55.8
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 1.7e-88 330.5 313 65.8
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 1.7e-88 330.5 410 52.7
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 3.8e-88 329.3 365 56.7
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 8.5e-88 328.2 378 54.8
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.4e-87 327.4 372 57.0
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.4e-87 327.4 392 56.4
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.9e-87 327.0 372 56.7
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.9e-87 327.0 373 55.5
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 3.2e-87 326.2 376 55.3
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 3.2e-87 326.2 314 64.3
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 5.5e-87 325.5 372 55.9
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.6e-86 323.9 372 55.9
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.6e-86 323.9 372 55.9
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.1e-86 323.6 371 55.8
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 2.7e-86 323.2 373 55.5
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 6.1e-86 322.0 372 55.6
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 7.9e-86 321.6 372 54.6
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 5.1e-85 318.9 389 56.6
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 1.5e-84 317.4 372 59.1
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 1.9e-84 317.0 363 56.5
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.9e-84 317.0 424 52.1
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 9.7e-84 314.7 356 57.6
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 2.2e-83 313.5 369 55.0
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 3.7e-83 312.8 369 57.5
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 1.1e-82 311.2 361 60.7
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 9.0e-82 308.1 293 59.7
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.2e-81 307.8 378 52.9
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 2.6e-81 306.6 365 57.0
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.0e-80 304.7 378 52.6
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 3.8e-80 302.8 314 59.6
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 8.5e-80 301.6 371 57.7
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 1.6e-78 297.4 379 56.5
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 1.4e-77 294.3 360 54.2
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 3.9e-77 292.7 394 51.5
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 4.1e-74 282.7 316 57.6
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 5.3e-74 282.3 364 53.6
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.5e-73 280.8 390 50.3
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 2.0e-73 280.4 422 46.4
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.9e-71 273.9 367 50.4
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 5.5e-71 272.3 349 53.6
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.0e-69 268.1 374 48.4
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 3.1e-66 256.5 372 51.1
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.6e-65 254.2 379 52.2
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.0e-64 251.5 384 46.6
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 6.5e-64 248.8 324 51.9
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.5e-63 247.7 380 46.6
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 1.5e-55 221.1 285 54.4
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 3.6e-54 216.5 325 47.1
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 6.8e-53 212.2 366 42.6
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.4e-50 204.5 369 48.5
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 4.2e-47 193.0 262 53.8
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.5e-47 192.6 293 46.1
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 1.2e-46 191.4 303 46.9
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.6e-46 191.0 409 39.1
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.3e-43 181.4 164 59.1
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.3e-40 171.4 291 42.3
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 5.0e-40 169.5 388 36.6
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.6e-39 166.0 148 59.5
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.5e-36 157.9 115 73.9
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.9e-35 152.9 189 54.0
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 4.1e-34 149.8 354 38.4
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.5e-31 141.4 212 48.6
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 1.7e-19 101.3 69 79.7
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 3.7e-19 100.1 62 83.9
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 2.3e-16 90.9 333 33.9
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 7.3e-15 85.9 316 36.1
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 1.6e-14 84.7 215 40.9
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 1.8e-13 81.3 120 40.8
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.6e-09 68.2 36 83.3
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 2.1e-09 67.8 191 34.0
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 6.0e-09 66.2 191 33.5
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 9.6e-07 58.9 42 76.2
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.6e-06 58.2 108 41.7
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 6.2e-06 56.2 36 61.1


User provided reference genes

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