Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 6.5e-88 327.4 170 100.0
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 2.0e-68 262.7 168 81.5
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 1.4e-61 240.0 168 72.6
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 1.8e-61 239.6 164 74.4
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 1.2e-60 236.9 164 74.4
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 1.2e-60 236.9 166 72.9
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 1.5e-60 236.5 160 75.6
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 1.5e-60 236.5 166 72.9
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 3.4e-60 235.3 159 75.5
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 5.7e-60 234.6 157 73.9
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 3.7e-59 231.9 157 74.5
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 6.3e-59 231.1 158 74.1
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 8.3e-59 230.7 158 72.2
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 8.3e-59 230.7 154 76.0
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 1.1e-58 230.3 154 75.3
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 1.1e-58 230.3 159 73.6
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 1.8e-58 229.6 154 74.0
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 2.4e-58 229.2 162 72.8
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 4.1e-58 228.4 166 71.7
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 4.1e-58 228.4 163 71.2
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 5.4e-58 228.0 154 74.7
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 7.0e-58 227.6 155 73.5
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 7.0e-58 227.6 150 76.0
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 9.2e-58 227.3 171 69.0
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 1.2e-57 226.9 155 72.9
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.2e-57 226.9 159 73.0
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 1.2e-57 226.9 159 73.0
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.6e-57 226.5 168 69.6
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 2.0e-57 226.1 154 72.1
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 2.7e-57 225.7 155 72.9
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 3.5e-57 225.3 162 68.5
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 3.5e-57 225.3 150 74.7
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 3.5e-57 225.3 169 68.0
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 4.5e-57 224.9 153 73.2
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 5.9e-57 224.6 150 75.3
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 5.9e-57 224.6 168 68.5
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 5.9e-57 224.6 169 74.0
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.0e-56 223.8 155 73.5
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 1.0e-56 223.8 167 68.9
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.3e-56 223.4 168 71.4
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 1.3e-56 223.4 154 70.8
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 1.3e-56 223.4 150 75.3
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 1.7e-56 223.0 154 74.0
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 2.3e-56 222.6 156 69.9
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 5.0e-56 221.5 160 71.2
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 5.0e-56 221.5 152 73.7
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 6.6e-56 221.1 154 70.8
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 8.6e-56 220.7 154 70.1
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 8.6e-56 220.7 159 70.4
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 8.6e-56 220.7 157 70.1
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 8.6e-56 220.7 150 73.3
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.1e-55 220.3 153 73.9
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 1.1e-55 220.3 168 68.5
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 1.1e-55 220.3 154 72.1
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 1.5e-55 219.9 164 70.7
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.5e-55 219.9 153 71.9
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.9e-55 219.5 154 75.3
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 1.9e-55 219.5 169 66.9
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.5e-55 219.2 150 73.3
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 3.3e-55 218.8 156 69.2
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 5.6e-55 218.0 150 73.3
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 7.3e-55 217.6 156 68.6
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 7.3e-55 217.6 156 70.5
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 9.5e-55 217.2 154 70.1
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 9.5e-55 217.2 158 69.0
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.2e-54 216.9 153 71.9
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 1.2e-54 216.9 159 68.6
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.2e-54 216.9 150 72.0
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 1.2e-54 216.9 159 69.2
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 1.6e-54 216.5 153 71.2
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.6e-54 216.5 155 71.6
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 1.6e-54 216.5 167 67.7
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 1.6e-54 216.5 153 69.3
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 2.1e-54 216.1 153 70.6
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.1e-54 216.1 176 63.6
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 2.1e-54 216.1 162 66.0
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 2.8e-54 215.7 153 72.5
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 2.8e-54 215.7 160 70.0
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 2.8e-54 215.7 168 66.7
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 4.7e-54 214.9 157 70.7
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 6.1e-54 214.5 156 70.5
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 8.0e-54 214.2 156 69.9
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 1.4e-53 213.4 156 68.6
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 1.4e-53 213.4 156 70.5
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 1.4e-53 213.4 159 67.9
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 1.4e-53 213.4 154 70.1
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 1.8e-53 213.0 162 67.3
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 1.8e-53 213.0 153 67.3
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 2.3e-53 212.6 162 67.9
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 2.3e-53 212.6 162 67.9
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 2.3e-53 212.6 154 67.5
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.3e-53 212.6 150 70.7
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 4.0e-53 211.8 159 67.9
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 5.2e-53 211.5 151 70.9
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 8.9e-53 210.7 161 67.7
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 1.5e-52 209.9 156 67.9
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 2.0e-52 209.5 151 70.2
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 2.6e-52 209.1 152 71.1
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 3.4e-52 208.8 156 67.3
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 3.4e-52 208.8 157 70.1
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 7.5e-52 207.6 162 63.6
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.3e-51 206.8 160 65.6
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 1.3e-51 206.8 151 70.9
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.8e-50 203.0 158 66.5
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 3.2e-50 202.2 155 67.1
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 5.4e-50 201.4 185 58.4
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 7.0e-50 201.1 157 66.9
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 7.0e-50 201.1 152 67.1
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 3.5e-49 198.7 162 65.4
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 6.6e-48 194.5 202 55.9
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 6.6e-48 194.5 164 61.0
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.5e-47 192.6 159 66.0
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 7.3e-47 191.0 134 71.6
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.6e-46 188.7 149 66.4
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 8.0e-46 187.6 214 52.8
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 2.3e-45 186.0 151 62.3
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 2.3e-45 186.0 165 61.2
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 4.0e-45 185.3 135 65.9
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 2.0e-44 183.0 115 84.3
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 7.5e-44 181.0 163 57.1
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 2.4e-42 176.0 129 67.4
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 3.2e-42 175.6 154 61.7
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 1.2e-41 173.7 184 53.3
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 2.7e-41 172.6 153 62.1
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 4.6e-41 171.8 153 62.7
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 8.6e-40 167.5 120 66.7
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 5.6e-39 164.9 158 57.0
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 1.6e-38 163.3 135 57.8
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 1.6e-38 163.3 149 58.4
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 3.6e-38 162.2 105 78.1
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 6.2e-38 161.4 112 75.9
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 1.4e-37 160.2 149 56.4
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 1.1e-34 150.6 158 51.9
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 1.2e-33 147.1 126 61.9
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.7e-33 146.0 103 68.9
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 2.5e-31 139.4 98 69.4
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 4.3e-31 138.7 111 65.8
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 5.2e-29 131.7 103 67.0
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 8.9e-29 131.0 164 46.3
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 2.6e-28 129.4 91 75.8
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 2.9e-27 125.9 108 64.8
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.0e-24 117.5 89 71.9
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 1.0e-24 117.5 151 46.4
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 2.2e-19 99.8 89 61.8
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 4.9e-19 98.6 177 33.9
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.2e-18 95.5 81 55.6
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 4.6e-17 92.0 66 72.7
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 1.1e-15 87.4 160 35.0
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 4.3e-15 85.5 59 71.2
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 4.3e-15 85.5 59 71.2
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 1.3e-14 84.0 114 48.2
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 2.1e-14 83.2 197 32.0
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 2.8e-14 82.8 63 63.5
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 3.1e-13 79.3 54 77.8
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 4.0e-13 79.0 61 60.7
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 3.4e-12 75.9 55 69.1
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 4.5e-12 75.5 153 35.3
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 5.4e-10 68.6 45 71.1
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.9e-07 60.1 48 58.3


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