Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 8.0e-36 153.3 81 100.0
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 3.0e-35 151.4 81 98.8
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 1.7e-30 135.6 81 85.2
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.7e-30 135.6 81 86.4
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 2.3e-30 135.2 81 85.2
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 3.8e-30 134.4 79 84.8
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 5.0e-30 134.0 81 85.2
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 85.2
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 85.2
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 84.0
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 85.2
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 1.5e-29 132.5 81 82.7
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.5e-29 132.5 81 82.7
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 81.5
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 1.9e-29 132.1 80 82.5
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 82.7
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 84.0
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 84.0
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 81.5
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 3.3e-29 131.3 81 82.7
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 3.3e-29 131.3 81 79.0
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 3.3e-29 131.3 81 79.0
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 3.3e-29 131.3 81 82.7
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 3.3e-29 131.3 81 84.0
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 4.3e-29 131.0 81 82.7
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 4.3e-29 131.0 81 81.5
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 4.3e-29 131.0 81 84.0
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 4.3e-29 131.0 80 82.5
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 5.6e-29 130.6 81 82.7
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 82.7
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 82.7
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 84.0
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 82.7
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 7.3e-29 130.2 81 80.2
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 9.5e-29 129.8 81 82.7
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 9.5e-29 129.8 81 82.7
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 9.5e-29 129.8 81 82.7
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 9.5e-29 129.8 81 82.7
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 9.5e-29 129.8 81 82.7
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 9.5e-29 129.8 81 81.5
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 9.5e-29 129.8 81 82.7
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 82.7
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 80.2
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 81.5
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 81.5
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 80.2
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 80.2
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 81.5
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 2.1e-28 128.6 80 82.5
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 2.1e-28 128.6 81 81.5
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 82.7
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 82.7
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 81.5
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 80.2
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 3.6e-28 127.9 78 83.3
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 80.2
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 81.5
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 4.7e-28 127.5 81 81.5
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 4.7e-28 127.5 81 81.5
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 79.0
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 80.2
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 79.0
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 82.7
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 81.5
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 81.5
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 79.0
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 80.2
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 8.0e-28 126.7 80 76.2
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 8.0e-28 126.7 81 80.2
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 8.0e-28 126.7 81 80.2
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 8.0e-28 126.7 80 77.5
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 1.0e-27 126.3 81 81.5
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.4e-27 125.9 81 80.2
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 79.0
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 79.0
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 76.5
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 75.3
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 3.0e-27 124.8 81 77.8
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 4.0e-27 124.4 81 80.2
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 5.2e-27 124.0 81 77.8
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 6.8e-27 123.6 81 75.3
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 6.8e-27 123.6 81 75.3
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 6.8e-27 123.6 79 77.2
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 8.9e-27 123.2 81 79.0
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 1.2e-26 122.9 81 76.5
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 2.0e-26 122.1 81 75.3
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 2.6e-26 121.7 81 77.8
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.4e-26 121.3 80 78.8
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 3.4e-26 121.3 78 75.6
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 4.4e-26 120.9 79 78.5
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 7.5e-26 120.2 81 76.5
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 9.8e-26 119.8 81 77.8
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.7e-25 119.0 80 77.5
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.7e-25 119.0 81 76.5
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 2.2e-25 118.6 81 77.8
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 2.2e-25 118.6 81 71.6
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 3.7e-25 117.9 79 74.7
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 8.3e-25 116.7 81 72.8
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 1.4e-24 115.9 83 69.9
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 1.3e-22 109.4 81 65.4
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 3.0e-22 108.2 76 72.4
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 1.4e-19 99.4 80 58.8
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 1.5e-18 95.9 57 84.2
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 3.4e-18 94.7 76 55.3
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 4.4e-18 94.4 80 57.5
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 5.8e-18 94.0 81 64.2
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 4.1e-16 87.8 64 65.6
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 7.0e-16 87.0 53 79.2
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 6.0e-15 84.0 78 61.5
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 2.3e-14 82.0 50 80.0
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 3.9e-14 81.3 51 78.4
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 2.5e-13 78.6 49 75.5
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 7.3e-13 77.0 82 53.7
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.8e-12 75.1 55 69.1
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 4.1e-08 61.2 39 66.7
MCO11G506 Micromonas commoda HOM05D002388 ORTHO05D008833 1.0e-06 56.6 68 36.8


User provided reference genes

Program Settings