Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 2.3e-145 518.8 259 100.0
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 2.9e-140 501.9 259 96.9
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 4.6e-117 424.9 265 80.4
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 2.1e-114 416.0 259 80.7
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 3.6e-114 415.2 266 78.9
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 8.0e-114 414.1 267 78.7
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 1.1e-113 413.7 267 78.3
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 1.4e-113 413.3 267 78.7
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 1.8e-113 412.9 267 79.0
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 2.3e-113 412.5 265 79.2
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 4.0e-113 411.8 267 78.3
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 6.8e-113 411.0 265 78.5
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 6.8e-113 411.0 265 80.0
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 1.2e-112 410.2 266 78.9
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.5e-112 409.8 267 77.9
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.3e-111 406.8 267 77.5
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 1.3e-111 406.8 267 77.9
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 1.7e-111 406.4 268 78.7
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 2.2e-111 406.0 267 78.3
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 2.2e-111 406.0 267 77.5
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 2.9e-111 405.6 267 78.3
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 2.9e-111 405.6 268 78.4
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 6.4e-111 404.4 265 78.5
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 8.3e-111 404.1 259 80.3
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.1e-110 403.7 266 77.8
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 1.1e-110 403.7 267 77.5
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.4e-110 403.3 267 77.9
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 2.4e-110 402.5 260 78.8
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.4e-110 402.5 265 78.5
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.2e-110 402.1 264 77.7
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 5.4e-110 401.4 265 78.1
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 5.4e-110 401.4 264 77.7
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 9.2e-110 400.6 268 76.5
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 9.2e-110 400.6 274 76.3
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 1.6e-109 399.8 267 76.8
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 1.6e-109 399.8 265 78.1
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.7e-109 399.1 269 77.0
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 3.5e-109 398.7 260 79.2
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 3.5e-109 398.7 267 76.8
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 3.5e-109 398.7 264 77.7
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 3.5e-109 398.7 259 78.8
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 4.6e-109 398.3 267 76.0
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 7.8e-109 397.5 267 76.0
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 1.0e-108 397.1 266 78.2
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 1.3e-108 396.7 257 77.0
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.7e-108 396.4 265 77.4
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.7e-108 396.4 251 80.1
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 2.3e-108 396.0 265 77.4
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 2.3e-108 396.0 263 76.0
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 3.0e-108 395.6 265 77.4
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 3.9e-108 395.2 267 76.0
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 3.9e-108 395.2 267 76.4
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 1.1e-107 393.7 267 74.9
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 2.5e-107 392.5 261 76.6
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 2.5e-107 392.5 261 76.6
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 3.3e-107 392.1 267 75.3
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 3.3e-107 392.1 257 76.7
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 4.3e-107 391.7 251 78.5
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 5.6e-107 391.3 266 75.9
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 7.3e-107 391.0 263 76.0
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 9.5e-107 390.6 257 76.7
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 9.5e-107 390.6 268 78.0
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.2e-106 390.2 266 75.2
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 3.6e-106 388.7 264 74.6
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 3.6e-106 388.7 259 77.2
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 3.6e-106 388.7 270 75.2
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 3.6e-106 388.7 250 79.6
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 4.7e-106 388.3 268 75.4
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 2.3e-105 386.0 267 74.5
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 3.1e-105 385.6 267 75.3
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 5.2e-105 384.8 267 73.8
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 5.2e-105 384.8 265 74.0
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 5.2e-105 384.8 268 74.3
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 6.8e-105 384.4 254 78.3
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 6.8e-105 384.4 265 74.0
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 6.8e-105 384.4 267 74.9
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 6.8e-105 384.4 267 74.9
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 8.9e-105 384.0 267 74.5
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 1.2e-104 383.6 266 74.4
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 1.2e-104 383.6 273 74.4
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 2.0e-104 382.9 269 72.5
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 9.9e-104 380.6 265 73.6
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.9e-103 379.0 261 75.1
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 3.7e-103 378.6 250 78.0
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 1.9e-102 376.3 280 72.5
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 2.4e-102 375.9 313 65.2
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 4.1e-102 375.2 266 71.1
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 7.1e-102 374.4 264 73.5
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.2e-101 373.6 250 76.0
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 2.7e-101 372.5 290 69.0
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.7e-101 372.5 293 67.6
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 2.7e-101 372.5 269 74.0
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 3.5e-101 372.1 267 73.8
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 3.5e-101 372.1 261 74.7
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 7.8e-101 370.9 255 73.3
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 1.7e-100 369.8 258 72.9
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 6.6e-100 367.9 262 72.1
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 4.3e-99 365.2 262 71.4
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 9.5e-99 364.0 268 69.4
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 1.1e-97 360.5 252 72.2
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 1.4e-97 360.1 308 64.0
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 3.1e-97 359.0 265 70.6
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 1.5e-96 356.7 238 76.5
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.6e-96 355.9 261 70.9
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 4.4e-96 355.1 248 73.0
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 1.3e-95 353.6 282 69.5
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 3.8e-95 352.1 257 69.3
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 3.8e-95 352.1 257 69.3
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 6.4e-95 351.3 265 69.8
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 1.9e-94 349.7 262 70.2
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 2.4e-94 349.4 247 71.7
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 1.2e-93 347.1 251 72.1
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.6e-93 346.7 257 69.3
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 2.1e-93 346.3 259 68.0
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 6.6e-92 341.3 261 67.8
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.5e-91 340.1 257 67.3
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 3.3e-91 339.0 267 65.5
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 5.6e-91 338.2 258 67.8
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 5.6e-91 338.2 256 68.4
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 5.6e-91 338.2 257 66.9
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 7.3e-91 337.8 275 67.3
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 9.6e-91 337.4 257 67.7
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 9.6e-91 337.4 257 67.3
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 1.2e-90 337.0 257 67.7
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 1.2e-90 337.0 257 67.7
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 1.6e-90 336.7 257 66.5
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 3.6e-90 335.5 258 67.1
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 6.2e-90 334.7 253 68.0
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 8.1e-90 334.3 257 66.9
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 8.1e-90 334.3 257 68.9
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 4.4e-88 328.6 253 66.0
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 1.3e-87 327.0 253 67.2
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 2.9e-87 325.9 276 63.0
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 3.8e-87 325.5 257 68.1
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 4.9e-87 325.1 235 71.5
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.4e-86 322.8 225 73.8
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 2.3e-84 316.2 263 63.9
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 3.9e-84 315.5 260 65.4
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 1.1e-83 313.9 268 62.7
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 5.6e-83 311.6 260 61.9
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 1.1e-81 307.4 256 62.9
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 3.1e-81 305.8 261 62.5
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 2.0e-80 303.1 207 78.7
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 7.6e-80 301.2 238 66.8
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 1.3e-79 300.4 263 62.0
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 1.7e-79 300.1 194 78.9
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 9.3e-78 294.3 195 80.5
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 9.3e-78 294.3 257 61.5
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 1.6e-77 293.5 257 61.1
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 1.1e-67 260.8 192 71.4
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 3.3e-67 259.2 144 86.8
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.2e-54 215.7 174 66.1
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 1.3e-42 177.6 213 50.2
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 5.9e-40 168.7 239 43.9
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 4.2e-38 162.5 173 52.0
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 1.0e-36 157.9 219 44.3
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 4.2e-30 136.0 93 72.0
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 6.1e-29 132.1 122 61.5
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.4e-28 131.0 74 89.2
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 2.6e-27 126.7 105 63.8
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.7e-26 124.0 89 73.0
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-25 119.8 156 42.9
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 1.3e-18 97.8 184 38.0
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 7.7e-16 88.6 118 44.1
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 5.2e-12 75.9 119 41.2
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 1.5e-11 74.3 63 61.9
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 3.4e-11 73.2 40 82.5
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 7.5e-11 72.0 48 66.7
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.4e-09 67.0 41 73.2
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 1.2e-08 64.7 42 66.7
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 3.9e-07 59.7 139 31.7
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 5.0e-07 59.3 86 34.9


User provided reference genes

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