Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-200 700.7 339 100.0
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-180 636.3 372 85.2
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 5.0e-180 634.4 375 84.8
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 6.5e-172 607.4 357 84.6
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-142 509.2 375 71.7
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 5.9e-141 504.6 372 71.8
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-121 439.9 370 60.3
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-95 352.8 178 96.6
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-89 332.4 232 74.1
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.0e-85 318.5 361 45.4
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-82 310.5 266 57.5
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.7e-82 309.3 355 46.5
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.4e-81 307.4 362 44.5
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.4e-81 306.6 361 44.3
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.3e-81 305.4 369 45.3
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 9.0e-81 304.7 365 43.8
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-80 303.5 372 43.3
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 9.9e-80 301.2 365 42.5
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-79 300.8 365 43.8
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-79 300.4 365 43.8
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.9e-79 299.7 352 43.8
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.8e-79 299.3 362 42.8
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 8.4e-79 298.1 354 44.1
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-78 297.0 368 44.3
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.5e-78 296.6 368 44.3
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-77 294.3 360 43.9
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 4.6e-77 292.4 346 44.5
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.3e-76 290.8 335 45.7
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 8.7e-76 288.1 324 46.0
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-75 286.2 332 44.9
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 5.6e-75 285.4 361 42.1
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.8e-74 283.1 354 42.7
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.2e-74 282.0 354 42.7
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.2e-74 282.0 354 42.7
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 8.2e-74 281.6 362 42.5
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-73 281.2 353 41.1
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.3e-73 278.9 354 42.4
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-72 277.7 377 41.1
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-72 277.3 353 40.2
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.4e-72 276.2 356 42.7
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.4e-72 276.2 338 44.1
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 5.8e-72 275.4 377 41.1
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 5.8e-72 275.4 377 41.1
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.8e-72 275.4 339 44.0
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 8.4e-71 271.6 350 40.3
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 8.4e-71 271.6 362 41.4
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-70 271.2 334 42.2
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.3e-70 268.1 356 41.9
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 1.2e-69 267.7 281 49.5
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 2.7e-69 266.5 354 41.2
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 5.1e-68 262.3 321 43.0
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 8.7e-68 261.5 354 41.0
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.2e-66 256.9 278 46.8
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.2e-66 256.9 318 45.3
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 6.9e-65 251.9 271 48.0
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-64 250.4 314 43.6
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 5.0e-63 245.7 362 38.7
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 1.9e-62 243.8 339 39.8
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-62 243.4 293 44.7
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.5e-62 242.3 305 42.3
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-61 241.1 290 44.5
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.1e-61 240.4 293 44.7
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.4e-60 237.7 308 42.9
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 3.9e-60 236.1 356 36.8
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-59 234.6 339 40.1
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 1.2e-56 224.6 316 41.5
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-55 221.1 366 33.9
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-55 220.7 366 34.2
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-55 219.9 359 34.8
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-55 219.9 352 36.4
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 3.8e-55 219.5 308 39.9
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-55 219.2 366 33.9
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-55 219.2 361 34.3
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 6.5e-55 218.8 268 44.4
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.5e-55 218.4 356 34.6
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-54 217.6 366 34.7
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.2e-54 216.5 366 33.3
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.2e-54 216.1 366 33.1
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.5e-54 215.7 356 34.0
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.2e-54 215.3 361 34.1
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 7.2e-54 215.3 260 42.3
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 7.2e-54 215.3 339 37.5
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.7e-53 212.6 366 32.8
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.9e-53 211.8 361 33.2
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.9e-53 211.8 357 33.6
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-52 211.5 369 36.0
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.1e-52 209.1 362 32.9
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.7e-52 208.8 359 33.7
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.8e-52 208.4 356 33.1
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.8e-52 208.4 281 39.9
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-51 206.8 356 33.4
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-51 206.8 254 43.3
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.3e-51 206.5 368 34.0
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.7e-51 205.7 354 35.3
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-50 204.5 236 44.9
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.7e-50 204.1 264 42.0
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.3e-50 202.2 343 35.3
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.1e-49 201.4 263 41.1
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.4e-49 200.3 186 52.7
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 4.5e-48 196.1 232 43.1
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-47 194.9 336 35.1
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 1.7e-47 194.1 354 34.2
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 2.2e-47 193.7 265 38.5
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 3.8e-47 193.0 351 32.2
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-46 189.9 234 42.7
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.7e-45 186.8 233 44.6
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.7e-45 186.0 362 33.1
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.7e-45 186.0 356 32.9
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 6.1e-45 185.7 256 40.6
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.0e-45 185.3 361 33.0
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-44 184.1 362 32.9
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-44 183.3 380 31.6
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 8.8e-44 181.8 181 48.1
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-43 180.6 359 31.8
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-43 180.6 359 32.9
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-43 180.3 380 30.3
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.3e-43 179.9 358 31.3
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-43 179.9 180 48.3
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.7e-43 179.1 359 31.2
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.7e-43 179.1 358 32.1
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-42 177.9 180 48.9
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.7e-42 176.4 371 31.5
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.2e-42 175.3 364 31.3
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 8.2e-42 175.3 296 36.1
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-41 174.5 361 31.9
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-41 174.1 359 31.8
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.4e-41 173.7 359 30.9
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 2.4e-41 173.7 216 42.1
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.1e-41 172.9 174 50.0
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 3.5e-40 169.9 180 46.7
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.7e-40 168.7 180 46.7
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-39 166.4 311 31.8
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 6.5e-39 165.6 225 40.4
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.2e-38 163.3 232 42.2
PSO384G2001 Papaver somniferum HOM05D003057 ORTHO05D003904 6.1e-37 159.1 162 48.8
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.0e-36 156.8 266 37.2
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.7e-35 152.5 308 33.4
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 2.2e-34 150.6 210 41.4
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 2.8e-34 150.2 177 43.5
PSO832G4354 Papaver somniferum HOM05D003057 ORTHO05D003904 4.8e-34 149.4 147 51.0
PSO063G5055 Papaver somniferum HOM05D003057 ORTHO05D003904 5.3e-33 146.0 148 46.6
COL.COLO4_37623 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.0e-31 141.7 139 51.1
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-31 141.4 196 41.3
PSO170G4809 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-31 141.4 148 45.9
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-31 141.0 216 35.6
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.2e-31 140.6 327 31.8
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 6.5e-31 139.0 234 38.5
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.9e-30 137.5 210 35.7
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 2.1e-29 134.0 216 34.7
COL.COLO4_28150 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.0e-28 129.8 136 46.3
Hma1.2p1_0035F.1_g021680 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 4.0e-28 129.8 129 46.5
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.2e-28 129.4 220 33.6
Os06g0523701 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 7.5e-27 125.6 150 40.7
TPR.G33575 Trifolium pratense HOM05D003057 ORTHO05D003904 9.8e-27 125.2 121 51.2
PSO832G1972 Papaver somniferum HOM05D000294 ORTHO05D000177 1.7e-26 124.4 132 46.2
PSO832G3441 Papaver somniferum HOM05D000294 ORTHO05D000177 1.7e-26 124.4 132 46.2
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 1.1e-25 121.7 209 36.4
PSO339G1811 Papaver somniferum HOM05D000294 ORTHO05D000177 1.4e-25 121.3 139 43.9
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 4.5e-24 116.3 117 46.2
Rhsim08G0101000 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.7e-24 115.5 133 44.4
PSO017G5295 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-23 114.8 126 44.4
Ah.16g108140 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-23 112.8 153 39.9
COL.COLO4_37925 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.5e-22 110.5 105 52.4
Ah.01g013550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.2e-22 109.8 137 38.7
COL.COLO4_04362 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.5e-22 109.4 239 33.5
TPR.G13641 Trifolium pratense HOM05D003057 ORTHO05D003904 8.0e-21 105.5 101 52.5
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 5.2e-20 102.8 239 31.4
Rhsim05G0202400 Rhododendron simsii HOM05D001226 ORTHO05D001078 8.9e-20 102.1 105 48.6
TPR.G9017 Trifolium pratense HOM05D003057 ORTHO05D003904 2.0e-19 100.9 107 48.6
Rhsim01G0125100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.8e-17 94.4 133 37.6
TPR.G9018 Trifolium pratense HOM05D003057 ORTHO05D003904 1.8e-17 94.4 106 48.1
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 4.1e-17 93.2 96 49.0
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.6e-16 91.3 128 39.8
PGSC0003DMG400002198 Solanum tuberosum HOM05D003057 ORTHO05D003904 3.9e-15 86.7 130 36.2
PSO357G0194 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-14 83.6 104 45.2
AUR62022531 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.4e-12 78.2 104 40.4
PSO675G7907 Papaver somniferum HOM05D000294 ORTHO05D000177 4.0e-12 76.6 75 46.7
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 1.5e-11 74.7 82 47.6
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 1.5e-11 74.7 82 47.6
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 1.5e-11 74.7 82 47.6
AUR62026174 Chenopodium quinoa HOM05D003057 ORTHO05D003904 3.7e-10 70.1 174 27.6
Rhsim08G0114700 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.4e-09 67.4 74 43.2
COL.COLO4_33793 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.5e-08 63.5 85 36.5
SHI08288 Sapria himalayana HOM05D003057 ORTHO05D003904 1.0e-07 62.0 86 31.4
Os10g0117400 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 3.9e-07 60.1 80 37.5
TPR.G28675 Trifolium pratense HOM05D003057 ORTHO05D003904 3.9e-07 60.1 122 30.3
MCO17G025 Micromonas commoda HOM05D003057 ORTHO05D003904 2.5e-06 57.4 204 25.5
ECA236G3949 Erigeron canadensis HOM05D003057 ORTHO05D003904 7.3e-06 55.8 47 46.8


User provided reference genes

Program Settings