Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0117 Papaver somniferum HOM05D007293 ORTHO05D009143 1.9e-44 182.2 95 100.0
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 2.0e-30 135.6 91 83.5
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 1.0e-26 123.2 91 79.1
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 7.7e-14 80.5 104 53.8
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 4.0e-10 68.2 73 58.9
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 6.8e-10 67.4 82 57.3
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 1.2e-09 66.6 112 46.4
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 2.6e-09 65.5 41 82.9
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 3.4e-09 65.1 60 61.7
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 5.7e-09 64.3 105 46.7
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 7.5e-09 63.9 76 56.6
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 6.3e-08 60.8 102 50.0
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 1.4e-07 59.7 85 51.8
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 1.8e-07 59.3 98 50.0
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 1.8e-07 59.3 76 53.9
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 1.8e-07 59.3 100 51.0
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 7.0e-07 57.4 99 43.4
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 9.2e-07 57.0 97 45.4
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 9.2e-07 57.0 97 49.5
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 1.2e-06 56.6 96 47.9
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 1.2e-06 56.6 102 44.1
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 1.2e-06 56.6 100 49.0
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 1.2e-06 56.6 101 48.5
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 1.6e-06 56.2 54 61.1
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 1.6e-06 56.2 99 47.5
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 2.7e-06 55.5 99 46.5
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 4.5e-06 54.7 82 51.2
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 5.9e-06 54.3 100 46.0
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 5.9e-06 54.3 89 44.9
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 5.9e-06 54.3 100 48.0
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 7.8e-06 53.9 101 46.5


User provided reference genes

Program Settings