Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 3.9e-215 751.1 362 100.0
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 8.4e-210 733.4 362 97.8
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 5.3e-180 634.4 358 82.4
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.2e-179 633.3 358 82.1
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 2.6e-179 632.1 358 82.7
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 2.9e-178 628.6 358 82.1
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.8e-178 628.2 358 81.8
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.8e-178 628.2 357 82.4
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.1e-177 626.7 358 81.8
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.4e-177 626.3 357 81.8
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.5e-177 625.5 358 81.3
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.5e-177 625.5 358 81.3
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 5.5e-177 624.4 357 82.9
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 9.3e-177 623.6 358 81.3
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.2e-176 623.2 358 81.0
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 3.6e-176 621.7 358 80.4
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 4.6e-176 621.3 358 80.4
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 4.6e-176 621.3 358 81.0
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 6.1e-176 620.9 358 81.0
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.8e-175 619.4 358 80.2
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.8e-175 619.4 358 80.2
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.3e-175 619.0 358 80.4
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 5.1e-175 617.8 358 80.2
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 6.7e-175 617.5 358 82.4
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 2.5e-174 615.5 358 79.6
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 5.7e-174 614.4 358 79.3
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 5.7e-174 614.4 358 80.4
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 9.7e-174 613.6 358 80.2
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.3e-173 613.2 358 78.8
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.6e-173 612.8 358 80.4
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 6.3e-173 610.9 358 79.9
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 6.3e-173 610.9 358 79.6
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 8.2e-173 610.5 358 79.9
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.8e-172 609.4 358 79.3
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 3.1e-172 608.6 357 79.3
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 5.3e-172 607.8 358 79.3
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 9.0e-172 607.1 358 79.1
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 9.0e-172 607.1 358 79.3
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.5e-171 606.3 358 77.9
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 2.0e-171 605.9 358 78.2
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 2.6e-171 605.5 357 78.7
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 3.4e-171 605.1 357 79.0
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 4.5e-171 604.7 358 78.5
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 4.5e-171 604.7 358 77.9
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 4.5e-171 604.7 357 79.3
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 7.7e-171 604.0 357 78.7
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.0e-170 603.6 358 79.3
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.0e-170 603.6 358 77.1
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.7e-170 602.8 358 77.7
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.7e-170 602.8 357 78.7
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.7e-170 602.8 357 78.7
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 3.8e-170 601.7 362 77.6
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 6.5e-170 600.9 392 73.0
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 6.5e-170 600.9 358 78.5
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.1e-169 600.1 357 77.3
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.1e-169 600.1 357 78.4
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 2.5e-169 599.0 361 77.0
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 2.5e-169 599.0 368 77.2
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.6e-168 596.3 357 78.2
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.6e-168 596.3 357 78.2
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 2.1e-168 595.9 358 76.8
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 2.1e-168 595.9 358 78.2
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 6.1e-168 594.3 357 78.2
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 7.9e-168 594.0 384 74.0
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 2.3e-167 592.4 357 77.3
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.1e-166 590.1 341 80.4
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 3.3e-166 588.6 358 76.8
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 9.7e-166 587.0 357 77.3
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 9.7e-166 587.0 360 76.4
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 2.8e-165 585.5 360 75.6
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 3.7e-165 585.1 358 75.7
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 6.3e-165 584.3 360 76.1
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 6.3e-165 584.3 358 75.4
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.1e-164 583.6 366 74.3
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 3.1e-164 582.0 360 74.7
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 3.1e-164 582.0 359 75.5
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 5.3e-164 581.3 360 75.8
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 5.3e-164 581.3 360 75.8
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 5.3e-164 581.3 360 75.8
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 6.9e-164 580.9 360 75.6
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 9.1e-164 580.5 359 75.8
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 9.1e-164 580.5 416 68.0
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 4.5e-163 578.2 425 67.3
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 5.0e-162 574.7 366 72.1
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.9e-161 572.8 400 68.8
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 3.6e-160 568.5 388 69.1
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.6e-160 568.5 357 75.6
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.4e-159 566.6 362 74.3
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.8e-159 566.2 360 74.4
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 1.1e-158 563.5 360 73.9
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 7.4e-158 560.8 359 73.8
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 2.2e-157 559.3 359 73.5
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 2.2e-154 549.3 313 83.4
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 1.9e-153 546.2 359 71.9
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 1.2e-152 543.5 357 71.1
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 7.2e-145 517.7 358 68.2
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 4.7e-144 515.0 337 72.4
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.8e-143 513.1 302 79.1
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 3.0e-143 512.3 312 78.8
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 2.0e-142 509.6 306 78.4
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 8.3e-141 504.2 357 67.8
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.5e-137 492.7 357 65.3
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 3.2e-137 492.3 358 65.4
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 1.6e-136 490.0 403 61.5
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 5.2e-135 485.0 359 66.9
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 9.2e-132 474.2 359 64.1
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 8.0e-120 434.5 368 58.4
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 2.3e-119 433.0 358 61.2
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 4.0e-119 432.2 250 82.8
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.9e-117 426.0 367 59.7
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 9.2e-116 421.0 241 84.2
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 2.7e-107 392.9 237 79.7
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 4.1e-100 369.0 211 79.6
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 7.1e-92 341.7 206 78.2
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 2.0e-70 270.4 180 74.4
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 4.6e-67 259.2 152 75.7
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.0e-61 241.5 161 70.2
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.2e-51 208.0 119 73.1
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 1.2e-51 208.0 126 73.0
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 8.2e-48 195.3 326 37.4
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 7.0e-39 165.6 203 47.3
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 2.3e-34 150.6 96 77.1
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.7e-29 134.4 117 59.8
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 3.3e-20 103.6 56 80.4
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 7.2e-20 102.4 108 51.9
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.3e-16 91.7 79 60.8
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 3.3e-12 77.0 51 62.7
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 7.3e-12 75.9 162 34.0
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 7.3e-12 75.9 38 81.6
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 2.0e-06 57.8 232 28.0


User provided reference genes

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