Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 2.8e-66 255.0 118 100.0
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 1.9e-49 199.1 119 79.8
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 3.3e-46 188.3 118 73.7
PSO339G4707 Papaver somniferum HOM05D007482 ORTHO05D003038 7.3e-46 187.2 118 73.7
PSO648G0129 Papaver somniferum HOM05D007482 ORTHO05D003038 5.8e-43 177.6 118 69.5
PSO630G0001 Papaver somniferum HOM05D007482 ORTHO05D003038 1.7e-34 149.4 98 68.4
PSO339G4924 Papaver somniferum HOM05D033620 ORTHO05D003038 3.2e-17 92.0 119 40.3
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 1.2e-16 90.1 121 38.8
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 7.9e-16 87.4 116 38.8
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 1.0e-15 87.0 117 39.3
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.3e-15 86.7 107 43.0
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.3e-15 86.7 106 43.4
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 5.1e-15 84.7 116 39.7
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 5.1e-15 84.7 112 34.8
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.1e-14 83.6 116 37.1
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 1.5e-14 83.2 134 35.1
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 1.5e-14 83.2 133 35.3
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 1.5e-14 83.2 117 40.2
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 2.5e-14 82.4 116 37.9
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 4.3e-14 81.6 129 35.7
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 4.3e-14 81.6 129 35.7
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 4.3e-14 81.6 117 39.3
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 7.4e-14 80.9 113 33.6
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 9.6e-14 80.5 127 35.4
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 1.3e-13 80.1 125 34.4
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.3e-13 80.1 113 38.1
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.6e-13 79.7 116 37.1
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 1.6e-13 79.7 135 34.1
PSO782G2157 Papaver somniferum HOM05D005672 ORTHO05D003038 1.6e-13 79.7 120 35.0
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 1.6e-13 79.7 105 39.0
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 1.6e-13 79.7 117 36.8
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 1.6e-13 79.7 117 36.8
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 2.1e-13 79.3 133 34.6
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 3.7e-13 78.6 130 34.6
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 4.8e-13 78.2 136 33.8
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 4.8e-13 78.2 115 38.3
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 6.2e-13 77.8 118 38.1
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 8.1e-13 77.4 136 33.1
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 8.1e-13 77.4 123 39.0
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 1.8e-12 76.3 119 36.1
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 4.0e-12 75.1 112 33.0
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 4.0e-12 75.1 117 36.8
AL1G24160 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 9.0e-12 73.9 118 34.7
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 9.0e-12 73.9 99 38.4
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 9.0e-12 73.9 122 34.4
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 9.0e-12 73.9 127 36.2
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 9.0e-12 73.9 127 36.2
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 9.0e-12 73.9 100 40.0
A05p29150 Brassica napus HOM05D007482 ORTHO05D003038 1.2e-11 73.6 121 36.4
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 1.2e-11 73.6 113 34.5
BraA05t21798Z Brassica rapa HOM05D007482 ORTHO05D003038 1.5e-11 73.2 121 36.4
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.5e-11 73.2 87 42.5
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.0e-11 72.8 123 34.1
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 2.0e-11 72.8 105 35.2
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 2.0e-11 72.8 116 33.6
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 2.0e-11 72.8 127 35.4
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.0e-11 72.8 117 34.2
AT1G12660 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 2.6e-11 72.4 121 35.5
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 2.6e-11 72.4 133 33.1
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 3.4e-11 72.0 116 33.6
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 3.4e-11 72.0 105 34.3
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 3.4e-11 72.0 105 34.3
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 3.4e-11 72.0 107 39.3
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 3.4e-11 72.0 107 36.4
Carub.0001s1235 Capsella rubella HOM05D007482 ORTHO05D003038 4.5e-11 71.6 118 33.9
PSO339G5535 Papaver somniferum HOM05D033620 ORTHO05D003038 7.6e-11 70.9 124 36.3
C05p44570 Brassica napus HOM05D007482 ORTHO05D003038 9.9e-11 70.5 121 33.1
BolC5t33184H Brassica oleracea HOM05D007482 ORTHO05D003038 9.9e-11 70.5 121 33.1
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 9.9e-11 70.5 120 34.2
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 9.9e-11 70.5 88 40.9
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-10 70.1 130 32.3
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 1.7e-10 69.7 119 35.3
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 1.7e-10 69.7 119 35.3
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 2.2e-10 69.3 123 35.0
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 2.2e-10 69.3 123 35.0
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 2.2e-10 69.3 123 35.0
BolC8t52262H Brassica oleracea HOM05D007482 ORTHO05D003038 2.2e-10 69.3 123 35.0
BraA09t41719Z Brassica rapa HOM05D007482 ORTHO05D003038 2.2e-10 69.3 132 31.8
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 2.9e-10 68.9 112 31.2
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 2.9e-10 68.9 106 34.9
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 3.8e-10 68.6 119 35.3
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 3.8e-10 68.6 95 34.7
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 3.8e-10 68.6 116 33.6
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 3.8e-10 68.6 89 39.3
A09p63710 Brassica napus HOM05D007482 ORTHO05D003038 6.4e-10 67.8 136 30.9
BolC8t52259H Brassica oleracea HOM05D007482 ORTHO05D003038 6.4e-10 67.8 117 33.3
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 6.4e-10 67.8 108 37.0
PSO729G0079 Papaver somniferum HOM05D033620 ORTHO05D003038 8.4e-10 67.4 109 35.8
Thhalv10009322m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.1e-09 67.0 97 33.0
A05p29160 Brassica napus HOM05D007482 ORTHO05D003038 1.4e-09 66.6 111 33.3
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.4e-09 66.6 121 33.1
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 1.9e-09 66.2 88 39.8
BraA06t26175Z Brassica rapa HOM05D007482 ORTHO05D003038 1.9e-09 66.2 96 37.5
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 1.9e-09 66.2 119 34.5
BolC3t18270H Brassica oleracea HOM05D007482 ORTHO05D003038 2.4e-09 65.9 96 37.5
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 3.2e-09 65.5 115 35.7
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 3.2e-09 65.5 108 36.1
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 4.2e-09 65.1 120 33.3
Solyc03g120290.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 4.2e-09 65.1 118 33.9
BcaC05g25122 Brassica carinata HOM05D007482 ORTHO05D003038 5.5e-09 64.7 115 33.0
Carub.0001s1239 Capsella rubella HOM05D007482 ORTHO05D003038 5.5e-09 64.7 76 43.4
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 7.1e-09 64.3 112 34.8
C05p10620 Brassica napus HOM05D007482 ORTHO05D003038 2.1e-08 62.8 113 31.9
BolC5t29804H Brassica oleracea HOM05D007482 ORTHO05D003038 2.1e-08 62.8 113 31.9
BraA05t21800Z Brassica rapa HOM05D007482 ORTHO05D003038 2.7e-08 62.4 111 32.4
BcaB07g32750 Brassica carinata HOM05D007482 ORTHO05D003038 3.5e-08 62.0 104 33.7
CAN.G438.58 Capsicum annuum HOM05D005672 ORTHO05D003038 3.5e-08 62.0 116 35.3
Carub.0001s1236 Capsella rubella HOM05D007482 ORTHO05D003038 4.6e-08 61.6 124 33.1
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 4.6e-08 61.6 123 30.1
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 6.0e-08 61.2 122 34.4
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 7.9e-08 60.8 113 31.0
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 7.9e-08 60.8 96 34.4
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 7.9e-08 60.8 113 31.0
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 7.9e-08 60.8 110 32.7
AL1G24120 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 1.3e-07 60.1 91 36.3
PGR102G1467 Punica granatum HOM05D005672 ORTHO05D003038 1.3e-07 60.1 114 35.1
Carub.0001s1238 Capsella rubella HOM05D007482 ORTHO05D003038 3.0e-07 58.9 123 30.1
Carub.0004s0495 Capsella rubella HOM05D007482 ORTHO05D003038 3.0e-07 58.9 136 30.1
Sopen03g039180 Solanum pennellii HOM05D005672 ORTHO05D003038 3.0e-07 58.9 121 32.2
PSO791G0001 Papaver somniferum HOM05D048766 ORTHO05D003038 5.1e-07 58.2 114 33.3
PSO832G3804 Papaver somniferum HOM05D048766 ORTHO05D003038 5.1e-07 58.2 114 33.3
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 6.7e-07 57.8 118 33.1
Thhalv10009942m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 8.7e-07 57.4 101 31.7
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.5e-06 56.6 117 32.5
CiPaw.02G152000 Carya illinoinensis HOM05D005672 ORTHO05D003038 1.9e-06 56.2 116 30.2
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 3.3e-06 55.5 108 34.3
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 3.3e-06 55.5 108 34.3
BcaC05g25168 Brassica carinata HOM05D007482 ORTHO05D003038 5.6e-06 54.7 88 33.0
C05p30070 Brassica napus HOM05D007482 ORTHO05D003038 5.6e-06 54.7 116 31.0
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 7.4e-06 54.3 80 33.8
COL.COLO4_30353 Corchorus olitorius HOM05D005672 ORTHO05D003038 9.6e-06 53.9 76 39.5
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 9.6e-06 53.9 108 34.3
PGR031G0360 Punica granatum HOM05D005672 ORTHO05D003038 9.6e-06 53.9 118 32.2
PGR031G3744 Punica granatum HOM05D005672 ORTHO05D003038 9.6e-06 53.9 118 32.2
Sed0004960 Sechium edule HOM05D005672 ORTHO05D003038 9.6e-06 53.9 116 27.6


User provided reference genes

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