Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 9.6e-206 719.9 364 100.0
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 8.4e-202 706.8 364 98.1
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 2.0e-150 536.2 364 74.5
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 1.8e-148 529.6 358 73.2
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 7.0e-148 527.7 362 72.1
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 7.0e-148 527.7 363 73.0
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 1.0e-146 523.9 358 71.8
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 6.8e-143 511.1 362 70.7
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 6.8e-143 511.1 365 71.8
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 1.2e-142 510.4 359 71.3
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 1.5e-142 510.0 359 71.0
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 2.6e-142 509.2 359 71.3
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 3.4e-142 508.8 362 72.4
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 7.5e-142 507.7 359 70.5
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.1e-140 503.8 362 71.5
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 1.4e-140 503.4 364 69.8
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 1.9e-140 503.1 367 70.0
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 1.9e-140 503.1 405 63.2
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 4.1e-140 501.9 356 72.8
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 4.6e-139 498.4 390 66.2
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 4.6e-139 498.4 359 70.2
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 6.0e-139 498.0 410 64.1
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 7.8e-139 497.7 358 69.6
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 6.6e-138 494.6 354 70.3
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 6.6e-138 494.6 363 69.4
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 6.6e-138 494.6 363 69.1
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 8.6e-138 494.2 418 62.4
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 8.6e-138 494.2 343 71.7
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 8.6e-138 494.2 380 66.8
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 1.1e-137 493.8 344 71.2
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.9e-137 493.0 363 69.1
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 3.3e-137 492.3 358 69.8
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 4.3e-137 491.9 364 69.0
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 7.3e-137 491.1 364 68.4
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 1.6e-136 490.0 365 68.8
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 4.7e-136 488.4 396 64.6
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.8e-135 486.5 354 66.9
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 2.3e-135 486.1 349 71.1
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 3.1e-135 485.7 405 63.0
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 6.8e-135 484.6 358 68.2
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 3.4e-134 482.3 412 61.9
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 1.7e-133 479.9 354 67.8
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 6.4e-133 478.0 412 61.7
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 6.4e-133 478.0 361 68.4
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 8.3e-133 477.6 359 68.0
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 4.1e-132 475.3 354 67.8
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 4.1e-132 475.3 459 56.9
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 5.4e-132 474.9 321 72.9
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 5.4e-132 474.9 355 67.6
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 2.1e-131 473.0 360 67.5
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 2.7e-131 472.6 369 65.9
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 7.8e-131 471.1 370 65.4
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 3.0e-130 469.2 368 64.9
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 3.0e-130 469.2 325 71.7
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 3.0e-130 469.2 355 65.4
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 5.1e-130 468.4 408 61.0
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 1.1e-129 467.2 342 67.3
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 1.2e-128 463.8 354 67.2
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 3.6e-128 462.2 358 65.4
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 8.1e-128 461.1 411 59.4
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 1.4e-127 460.3 358 64.5
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 3.1e-127 459.1 384 62.0
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 8.9e-127 457.6 411 58.6
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 1.2e-126 457.2 399 60.7
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 4.4e-126 455.3 386 61.1
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 5.8e-126 454.9 397 60.7
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 1.3e-125 453.8 336 67.3
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 1.3e-125 453.8 361 64.8
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 1.7e-125 453.4 342 66.4
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 2.2e-125 453.0 382 63.4
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 2.9e-125 452.6 405 60.7
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 8.3e-125 451.1 401 59.6
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.4e-124 450.3 342 65.5
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 3.2e-124 449.1 407 59.7
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 4.1e-124 448.7 402 59.7
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 5.4e-124 448.4 413 58.1
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 1.6e-123 446.8 401 59.4
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 2.1e-123 446.4 408 59.6
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 2.1e-123 446.4 424 57.8
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 2.7e-123 446.0 330 68.5
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 3.5e-123 445.7 336 67.9
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 1.0e-122 444.1 334 67.7
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 1.7e-122 443.4 399 59.9
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 1.7e-122 443.4 399 59.9
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 5.1e-122 441.8 342 65.2
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 8.6e-122 441.0 449 55.2
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 1.1e-121 440.7 309 72.8
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.1e-121 440.7 377 59.2
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 5.6e-121 438.3 370 60.5
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 1.1e-119 434.1 374 61.5
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 1.1e-119 434.1 375 61.3
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 8.7e-114 414.5 354 61.0
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 3.3e-113 412.5 368 60.1
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 3.4e-110 402.5 403 56.8
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 9.9e-110 401.0 368 59.2
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 4.9e-109 398.7 363 58.1
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 4.9e-109 398.7 358 60.1
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 6.4e-109 398.3 354 60.2
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 1.4e-108 397.1 354 60.2
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 2.4e-108 396.4 368 59.2
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.6e-104 383.6 342 60.5
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.8e-104 382.9 342 60.2
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.8e-104 382.1 342 60.2
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.0e-103 379.0 342 59.9
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 9.0e-103 377.9 342 59.6
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 3.4e-102 375.9 314 59.9
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 9.9e-102 374.4 298 64.4
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 9.9e-102 374.4 298 64.4
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 1.6e-96 357.1 365 53.2
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.3e-93 347.4 270 65.2
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 2.9e-93 346.3 367 50.4
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 3.1e-87 326.2 213 75.1
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 2.1e-83 313.5 311 50.8
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 9.7e-81 304.7 216 69.9
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.2e-77 293.5 369 48.2
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 2.9e-77 293.1 214 66.8
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.3e-73 279.3 214 65.0
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 1.1e-60 238.0 255 52.5
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 2.8e-56 223.4 394 36.5
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 7.7e-54 215.3 150 69.3
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 7.2e-52 208.8 157 67.5
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 8.0e-51 205.3 126 82.5
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 1.9e-44 184.1 148 63.5
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.6e-43 181.0 128 70.3
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.6e-43 181.0 158 59.5
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 4.1e-39 166.4 115 71.3
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 2.5e-28 130.6 79 78.5
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 7.8e-22 109.0 73 76.7
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 7.8e-22 109.0 147 45.6
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 9.2e-15 85.5 66 60.6
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 7.8e-14 82.4 424 22.2
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 3.6e-11 73.6 72 51.4
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 1.3e-08 65.1 59 61.0
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 2.2e-08 64.3 53 60.4


User provided reference genes

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