Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO325G0018 Papaver somniferum HOM05D005008 ORTHO05D006092 7.5e-77 290.4 144 100.0
PSO144G0132 Papaver somniferum HOM05D005008 ORTHO05D006092 5.5e-72 274.2 139 97.1
PSO478G0762 Papaver somniferum HOM05D005008 ORTHO05D006092 1.8e-54 216.1 122 87.7
PSO017G3706 Papaver somniferum HOM05D005008 ORTHO05D006092 4.0e-54 214.9 122 86.9
PSO017G4122 Papaver somniferum HOM05D005008 ORTHO05D006092 1.5e-53 213.0 122 86.1
PSO339G0217 Papaver somniferum HOM05D005008 ORTHO05D006092 1.8e-46 189.5 107 85.0
PSO541G3575 Papaver somniferum HOM05D005008 ORTHO05D006092 1.9e-43 179.5 104 83.7
Aqoxy7G02777 Aquilegia oxysepala HOM05D005008 ORTHO05D006092 2.1e-42 176.0 136 62.5
Atru.chr3.3067 Acer truncatum HOM05D005008 ORTHO05D006092 6.2e-39 164.5 135 58.5
Hma1.2p1_0101F.1_g049710 Hydrangea macrophylla HOM05D005008 ORTHO05D006092 1.8e-38 162.9 135 57.0
Nitab4.5_0015902g0010 Nicotiana tabacum HOM05D005008 ORTHO05D006092 3.1e-38 162.2 132 58.3
PGSC0003DMG400005906 Solanum tuberosum HOM05D005008 ORTHO05D006092 4.0e-38 161.8 133 57.1
Nitab4.5_0003644g0030 Nicotiana tabacum HOM05D005008 ORTHO05D006092 5.2e-38 161.4 136 56.6
Solyc06g073900.3 Solanum lycopersicum HOM05D005008 ORTHO05D006092 5.2e-38 161.4 134 56.0
Sopen06g030300 Solanum pennellii HOM05D005008 ORTHO05D006092 5.2e-38 161.4 134 56.0
DCAR_021985 Daucus carota HOM05D005008 ORTHO05D006092 8.9e-38 160.6 138 55.1
CAN.G1463.18 Capsicum annuum HOM05D005008 ORTHO05D006092 1.2e-37 160.2 133 56.4
Rhsim13G0198500 Rhododendron simsii HOM05D005008 ORTHO05D006092 4.4e-37 158.3 135 56.3
PGSC0003DMG400002990 Solanum tuberosum HOM05D005008 ORTHO05D006092 5.8e-37 157.9 135 56.3
Nitab4.5_0002426g0070 Nicotiana tabacum HOM05D005008 ORTHO05D006092 9.9e-37 157.1 135 56.3
Peaxi162Scf00717g00217 Petunia axillaris HOM05D005008 ORTHO05D006092 9.9e-37 157.1 135 56.3
CSS0002518 Camellia sinensis var. sinensis HOM05D005008 ORTHO05D006092 3.7e-36 155.2 135 55.6
Solyc11g071790.2 Solanum lycopersicum HOM05D005008 ORTHO05D006092 4.9e-36 154.8 135 56.3
Sopen11g029460 Solanum pennellii HOM05D005008 ORTHO05D006092 4.9e-36 154.8 131 56.5
Nitab4.5_0005569g0020 Nicotiana tabacum HOM05D005008 ORTHO05D006092 6.4e-36 154.5 135 54.8
Peaxi162Scf00098g00148 Petunia axillaris HOM05D005008 ORTHO05D006092 6.4e-36 154.5 132 54.5
Dinv18863 Davidia involucrata HOM05D005008 ORTHO05D006092 1.1e-35 153.7 134 55.2
TAR628G1298 Trochodendron aralioides HOM05D005008 ORTHO05D006092 1.4e-35 153.3 135 53.3
Psat7g129160 Pisum sativum HOM05D005008 ORTHO05D006092 3.2e-35 152.1 134 56.7
unitig_746.g26601 Utricularia gibba HOM05D005008 ORTHO05D006092 5.4e-35 151.4 133 55.6
ATR1136G073 Amborella trichopoda HOM05D005008 ORTHO05D006092 7.1e-35 151.0 136 51.5
AUR62001577 Chenopodium quinoa HOM05D005008 ORTHO05D006092 1.2e-34 150.2 142 52.1
Dinv21730 Davidia involucrata HOM05D005008 ORTHO05D006092 2.1e-34 149.4 131 55.0
RcHm_v2.0_Chr7g0230441 Rosa chinensis HOM05D005008 ORTHO05D006092 2.1e-34 149.4 135 56.3
Cc01_g07910 Coffea canephora HOM05D005008 ORTHO05D006092 2.7e-34 149.1 144 53.5
Migut.D02371 Erythranthe guttata HOM05D005008 ORTHO05D006092 3.5e-34 148.7 132 55.3
Migut.D02374 Erythranthe guttata HOM05D005008 ORTHO05D006092 3.5e-34 148.7 132 55.3
Manes.11G103800 Manihot esculenta HOM05D005008 ORTHO05D006092 3.5e-34 148.7 135 54.8
unitig_899.g15386 Utricularia gibba HOM05D005008 ORTHO05D006092 4.6e-34 148.3 131 55.0
RcHm_v2.0_Chr5g0049161 Rosa chinensis HOM05D005008 ORTHO05D006092 6.0e-34 147.9 135 55.6
Sc21g0006720 Simmondsia chinensis HOM05D005008 ORTHO05D006092 6.0e-34 147.9 135 54.1
vmacro04058 Vaccinium macrocarpon HOM05D005008 ORTHO05D006092 6.0e-34 147.9 135 54.1
Duzib170G0524 Durio zibethinus HOM05D005008 ORTHO05D006092 7.8e-34 147.5 136 53.7
FAN08G1342 Fragaria x ananassa HOM05D005008 ORTHO05D006092 7.8e-34 147.5 131 58.0
FAN18G0191 Fragaria x ananassa HOM05D005008 ORTHO05D006092 7.8e-34 147.5 131 58.0
Ciclev10029485m.g Citrus clementina HOM05D005008 ORTHO05D006092 2.3e-33 146.0 135 53.3
PGR083G2197 Punica granatum HOM05D005008 ORTHO05D006092 3.0e-33 145.6 133 53.4
Hund18808 Selenicereus undatus HOM05D005008 ORTHO05D006092 3.0e-33 145.6 144 49.3
TPR.G38259 Trifolium pratense HOM05D005008 ORTHO05D006092 3.0e-33 145.6 138 52.2
CsaV3_1G043620 Cucumis sativus L. HOM05D005008 ORTHO05D006092 3.9e-33 145.2 135 52.6
FAN13G1722 Fragaria x ananassa HOM05D005008 ORTHO05D006092 3.9e-33 145.2 131 57.3
THA.LOC104808952 Tarenaya hassleriana HOM05D005008 ORTHO05D006092 3.9e-33 145.2 131 53.4
MELO3C015091.2 Cucumis melo HOM05D005008 ORTHO05D006092 5.1e-33 144.8 135 53.3
Lsat_1_v5_gn_6_104840 Lactuca sativa HOM05D005008 ORTHO05D006092 6.6e-33 144.4 144 50.7
Lj2g0024950 Lotus japonicus HOM05D005008 ORTHO05D006092 8.6e-33 144.1 138 49.3
Thecc.09G268300 Theobroma cacao HOM05D005008 ORTHO05D006092 8.6e-33 144.1 136 50.7
CDE05G0523 Ceratophyllum demersum HOM05D005008 ORTHO05D006092 1.1e-32 143.7 132 52.3
Ca_18750_v3 Cicer arietinum L. HOM05D005008 ORTHO05D006092 1.1e-32 143.7 134 53.7
Lalb_Chr16g0385131 Lupinus albus HOM05D005008 ORTHO05D006092 1.1e-32 143.7 134 51.5
CDE04G3167 Ceratophyllum demersum HOM05D005008 ORTHO05D006092 1.5e-32 143.3 132 52.3
SGA_v2.0_scaffold114G31950 Striga asiatica HOM05D005008 ORTHO05D006092 1.5e-32 143.3 131 53.4
FAN04G2231 Fragaria x ananassa HOM05D005008 ORTHO05D006092 2.5e-32 142.5 127 56.7
Eucgr.J00592 Eucalyptus grandis HOM05D005008 ORTHO05D006092 3.3e-32 142.1 130 53.1
GSVIVG01028464001 Vitis vinifera HOM05D005008 ORTHO05D006092 3.3e-32 142.1 135 50.4
MSTRG.21002 Avicennia marina HOM05D005008 ORTHO05D006092 4.3e-32 141.7 130 54.6
EL10Ac7g16268 Beta vulgaris HOM05D005008 ORTHO05D006092 4.3e-32 141.7 141 49.6
MSTRG.18800 Avicennia marina HOM05D005008 ORTHO05D006092 5.6e-32 141.4 130 53.1
Cfa010212 Carpinus fangiana HOM05D005008 ORTHO05D006092 7.3e-32 141.0 135 52.6
CiPaw.13G126400 Carya illinoinensis HOM05D005008 ORTHO05D006092 7.3e-32 141.0 135 51.9
ClCG03G012390 Citrullus lanatus HOM05D005008 ORTHO05D006092 7.3e-32 141.0 133 51.9
Glyma.20G018300 Glycine max HOM05D005008 ORTHO05D006092 9.5e-32 140.6 139 49.6
MD03G1160100 Malus domestica HOM05D005008 ORTHO05D006092 9.5e-32 140.6 135 51.1
Lj2E351T1 Lonicera japonica HOM05D005008 ORTHO05D006092 1.2e-31 140.2 121 53.7
Sed0018780 Sechium edule HOM05D005008 ORTHO05D006092 1.6e-31 139.8 135 51.1
VMungo0251G1441 Vigna mungo HOM05D005008 ORTHO05D006092 1.6e-31 139.8 134 52.2
Duzib168G2291 Durio zibethinus HOM05D005008 ORTHO05D006092 2.8e-31 139.0 136 50.0
Thhalv10019305m.g Eutrema salsugineum HOM05D005008 ORTHO05D006092 2.8e-31 139.0 136 49.3
Sp1g07130 Schrenkiella parvula HOM05D005008 ORTHO05D006092 3.6e-31 138.7 138 49.3
MBI17_g21974_MAGBIO Magnolia biondii HOM05D005008 ORTHO05D006092 1.1e-30 137.1 127 50.4
THA.LOC104815294 Tarenaya hassleriana HOM05D005008 ORTHO05D006092 1.1e-30 137.1 133 50.4
TPR.G27448 Trifolium pratense HOM05D005008 ORTHO05D006092 1.1e-30 137.1 134 50.7
MD11G1175100 Malus domestica HOM05D005008 ORTHO05D006092 1.4e-30 136.7 135 50.4
Medtr4g084320 Medicago truncatula HOM05D005008 ORTHO05D006092 1.8e-30 136.3 134 51.5
Prupe.6G148300 Prunus persica HOM05D005008 ORTHO05D006092 1.8e-30 136.3 135 49.6
Aa31LG5G14080 Aethionema arabicum HOM05D005008 ORTHO05D006092 2.4e-30 136.0 138 47.8
arahy.Tifrunner.gnm1.ann1.LRUS99 Arachis hypogaea HOM05D005008 ORTHO05D006092 2.4e-30 136.0 133 51.1
Sc12g0000410 Simmondsia chinensis HOM05D005008 ORTHO05D006092 2.4e-30 136.0 133 51.1
Lalb_Chr05g0219631 Lupinus albus HOM05D005008 ORTHO05D006092 3.1e-30 135.6 134 50.0
Gohir.A08G007400 Gossypium hirsutum HOM05D005008 ORTHO05D006092 4.0e-30 135.2 129 49.6
Sabra09G0000700 Salix brachista HOM05D005008 ORTHO05D006092 6.8e-30 134.4 129 48.8
Carub.0001s0784 Capsella rubella HOM05D005008 ORTHO05D006092 8.9e-30 134.0 138 47.8
Gohir.D08G017500 Gossypium hirsutum HOM05D005008 ORTHO05D006092 8.9e-30 134.0 129 49.6
Gorai.004G011900 Gossypium raimondii HOM05D005008 ORTHO05D006092 8.9e-30 134.0 129 49.6
MBI17_g21976_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 8.9e-30 134.0 123 51.2
Oeu031444.1 Olea europaea HOM05D005008 ORTHO05D006092 8.9e-30 134.0 130 49.2
HanXRQChr05g0163331 Helianthus annuus HOM05D005008 ORTHO05D006092 1.2e-29 133.7 143 46.9
Phvul.002G096700 Phaseolus vulgaris HOM05D005008 ORTHO05D006092 1.5e-29 133.3 134 50.0
A08p35120 Brassica napus HOM05D005008 ORTHO05D006092 2.0e-29 132.9 141 48.9
Aa31LG2G20300 Aethionema arabicum HOM05D005008 ORTHO05D006092 3.4e-29 132.1 131 50.4
BcaB03g13330 Brassica carinata HOM05D005008 ORTHO05D006092 3.4e-29 132.1 139 48.2
COL.COLO4_25364 Corchorus olitorius HOM05D005008 ORTHO05D006092 3.4e-29 132.1 131 51.1
arahy.Tifrunner.gnm1.ann1.0IE2SQ Arachis hypogaea HOM05D005008 ORTHO05D006092 4.4e-29 131.7 133 50.4
BraA08t35421Z Brassica rapa HOM05D005008 ORTHO05D006092 5.8e-29 131.3 141 48.2
CARHR008370 Cardamine hirsuta HOM05D005008 ORTHO05D006092 1.7e-28 129.8 134 47.0
BcaC07g38394 Brassica carinata HOM05D005008 ORTHO05D006092 2.2e-28 129.4 131 50.4
C08p11520 Brassica napus HOM05D005008 ORTHO05D006092 2.2e-28 129.4 131 50.4
BolC8t48832H Brassica oleracea HOM05D005008 ORTHO05D006092 2.2e-28 129.4 131 50.4
A06p05480 Brassica napus HOM05D005008 ORTHO05D006092 3.8e-28 128.6 138 47.8
BraA06t23756Z Brassica rapa HOM05D005008 ORTHO05D006092 3.8e-28 128.6 138 47.8
Potri.009G001100 Populus trichocarpa HOM05D005008 ORTHO05D006092 4.9e-28 128.3 129 47.3
AT1G08480 Arabidopsis thaliana HOM05D005008 ORTHO05D006092 8.4e-28 127.5 134 46.3
Zm00001eb173990 Zea mays HOM05D005008 ORTHO05D006092 8.4e-28 127.5 139 44.6
ECA246G4934 Erigeron canadensis HOM05D005008 ORTHO05D006092 1.4e-27 126.7 134 47.8
BcaB07g34092 Brassica carinata HOM05D005008 ORTHO05D006092 2.4e-27 125.9 137 46.7
C05p06590 Brassica napus HOM05D005008 ORTHO05D006092 2.4e-27 125.9 137 46.7
BolC5t29419H Brassica oleracea HOM05D005008 ORTHO05D006092 2.4e-27 125.9 137 46.7
Zm00001eb260600 Zea mays HOM05D005008 ORTHO05D006092 2.4e-27 125.9 138 44.2
arahy.Tifrunner.gnm1.ann1.L1LZAQ Arachis hypogaea HOM05D005008 ORTHO05D006092 1.6e-26 123.2 134 48.5
SEGI_09212 Sequoiadendron giganteum HOM05D005008 ORTHO05D006092 1.6e-26 123.2 137 43.8
TWI31G0222 Tripterygium wilfordii HOM05D005008 ORTHO05D006092 1.6e-26 123.2 131 48.1
Os08g0112800 Oryza sativa ssp. japonica HOM05D005008 ORTHO05D006092 6.0e-26 121.3 131 46.6
AL1G18910 Arabidopsis lyrata HOM05D005008 ORTHO05D006092 8.7e-25 117.5 151 41.7
PSO447G0120 Papaver somniferum HOM05D005008 ORTHO05D006092 1.2e-23 113.6 73 74.0
arahy.Tifrunner.gnm1.ann1.67HGNM Arachis hypogaea HOM05D005008 ORTHO05D006092 2.8e-23 112.5 114 50.0
HPP92_002034 Vanilla planifolia HOM05D005008 ORTHO05D006092 8.1e-23 110.9 131 42.0
Atru.chr5.2770 Acer truncatum HOM05D005008 ORTHO05D006092 5.2e-22 108.2 89 60.7
QL02p021765 Quercus lobata HOM05D005008 ORTHO05D006092 1.2e-21 107.1 204 34.3
Nn1g08680 Nelumbo nucifera HOM05D005008 ORTHO05D006092 3.2e-19 99.0 81 58.0
Ah.01g003330 Amaranthus hybridus HOM05D005008 ORTHO05D006092 5.4e-19 98.2 217 31.3
SalBow6G2115 Salvia bowleyana HOM05D005008 ORTHO05D006092 1.2e-18 97.1 83 55.4
Mapoly0024s0049 Marchantia polymorpha HOM05D005008 ORTHO05D006092 3.9e-17 92.0 133 38.3
AUR62020205 Chenopodium quinoa HOM05D005008 ORTHO05D006092 3.3e-16 89.0 90 46.7
FvH4_5g32770 Fragaria vesca HOM05D005008 ORTHO05D006092 4.3e-16 88.6 82 56.1
Haze_23598 Corylus avellana HOM05D005008 ORTHO05D006092 1.1e-14 84.0 87 47.1
Pp3c7_24330 Physcomitrium patens HOM05D005008 ORTHO05D006092 4.5e-13 78.6 139 33.1
Pp3c1_6020 Physcomitrium patens HOM05D005008 ORTHO05D006092 9.9e-13 77.4 139 32.4
CBR_g29511 Chara braunii HOM05D005008 ORTHO05D006092 5.4e-11 71.6 134 35.1
Sed0017043 Sechium edule HOM05D005008 ORTHO05D006092 1.2e-10 70.5 80 43.8
BcaB07g32561 Brassica carinata HOM05D005008 ORTHO05D006092 6.7e-09 64.7 88 46.6
TPR.G18466 Trifolium pratense HOM05D005008 ORTHO05D006092 1.3e-07 60.5 51 52.9
SMO364G0346 Selaginella moellendorffii HOM05D005008 ORTHO05D006092 2.4e-06 56.2 95 34.7


User provided reference genes

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