Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 0.0e+00 1205.3 623 100.0
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 8.4e-210 734.2 628 66.9
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 1.1e-209 733.8 605 69.1
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 3.6e-184 649.0 386 89.4
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 3.5e-179 632.5 575 65.2
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 1.6e-107 394.4 615 43.6
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 5.0e-93 346.3 633 39.7
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 1.0e-85 322.0 610 39.3
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 6.5e-85 319.3 604 39.2
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 2.0e-73 281.2 578 37.5
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 2.0e-73 281.2 567 38.3
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 3.3e-73 280.4 600 36.2
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 4.4e-73 280.0 625 37.0
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 2.2e-72 277.7 623 36.3
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 2.0e-70 271.2 606 37.5
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 2.2e-69 267.7 615 35.0
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 2.7e-67 260.8 625 35.8
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.5e-65 255.0 573 34.6
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 2.6e-65 254.2 616 35.1
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 4.4e-65 253.4 617 34.5
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 2.2e-64 251.1 571 34.0
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 2.0e-62 244.6 552 33.0
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 4.5e-62 243.4 555 36.8
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 5.9e-62 243.0 615 34.3
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.9e-61 240.7 614 34.5
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 2.9e-61 240.7 614 34.4
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 3.8e-61 240.4 557 33.4
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 2.1e-59 234.6 608 34.2
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.7e-59 234.2 608 34.2
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 6.1e-59 233.0 584 34.6
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 1.4e-58 231.9 622 34.2
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 5.2e-58 229.9 582 33.5
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.2e-57 228.8 573 34.4
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 1.5e-57 228.4 590 34.1
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 2.0e-57 228.0 541 34.4
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 6.3e-56 223.0 595 33.4
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 6.3e-56 223.0 637 32.5
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 2.4e-55 221.1 589 33.1
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 7.0e-55 219.5 637 33.4
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 1.6e-54 218.4 651 30.7
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 3.5e-54 217.2 685 30.9
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.5e-54 216.9 637 32.8
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.7e-53 214.9 545 33.6
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 7.2e-52 209.5 606 30.4
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.2e-51 208.8 636 31.4
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 2.1e-51 208.0 637 31.2
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 3.6e-51 207.2 587 31.0
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 6.1e-51 206.5 637 31.2
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.0e-50 205.7 517 33.8
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 1.8e-50 204.9 559 33.5
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.3e-50 204.5 579 32.6
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 8.8e-50 202.6 637 30.9
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 1.2e-49 202.2 542 35.1
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 1.3e-48 198.7 620 32.6
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 1.7e-48 198.4 554 32.9
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 2.2e-48 198.0 591 30.3
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 6.3e-48 196.4 606 30.7
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.4e-47 195.3 643 30.2
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 1.8e-47 194.9 651 31.0
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 1.8e-47 194.9 540 32.4
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 9.2e-47 192.6 495 34.1
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 1.2e-46 192.2 604 31.0
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 1.6e-46 191.8 488 32.6
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 3.8e-45 187.2 620 30.5
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 3.8e-45 187.2 569 32.3
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 1.6e-43 181.8 609 29.2
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 4.7e-43 180.3 424 34.7
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 8.0e-43 179.5 503 31.6
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 4.0e-42 177.2 546 31.5
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 6.8e-42 176.4 598 29.4
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 2.0e-41 174.9 498 33.7
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 3.4e-41 174.1 578 28.9
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 5.7e-41 173.3 345 36.8
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 5.7e-41 173.3 562 30.6
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 2.2e-40 171.4 518 32.6
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 3.2e-39 167.5 548 28.8
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 4.6e-38 163.7 601 28.5
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 6.6e-37 159.8 561 29.2
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 2.8e-35 154.5 568 29.4
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 8.0e-35 152.9 532 27.6
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 1.5e-33 148.7 527 30.7
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 1.5e-33 148.7 527 30.7
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 2.6e-33 147.9 524 31.5
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 4.4e-33 147.1 543 29.7
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 4.4e-33 147.1 353 35.7
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 5.8e-33 146.7 342 34.2
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 9.8e-33 146.0 531 29.2
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 8.3e-32 142.9 411 32.4
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.1e-31 142.5 562 30.6
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 1.9e-31 141.7 411 32.1
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 1.9e-31 141.7 537 30.0
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 3.2e-31 141.0 411 31.9
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 4.1e-31 140.6 530 30.8
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 5.4e-31 140.2 397 32.2
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 1.2e-30 139.0 581 28.1
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.2e-27 129.0 540 26.3
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 3.6e-27 127.5 296 34.8
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 6.2e-27 126.7 541 26.2
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 2.2e-24 118.2 501 28.5
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 2.2e-24 118.2 472 26.5
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 4.3e-20 104.0 601 25.6
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 1.2e-14 85.9 129 40.3
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 1.7e-13 82.0 257 29.2
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 1.1e-12 79.3 143 40.6
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 1.2e-11 75.9 485 23.3
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 7.6e-09 66.6 192 30.2
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 3.8e-08 64.3 85 42.4


User provided reference genes

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