Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO302G0249 Papaver somniferum HOM05D003567 ORTHO05D004117 7.7e-189 663.7 342 100.0
PSO170G0922 Papaver somniferum HOM05D003567 ORTHO05D004117 7.3e-147 524.2 372 78.2
Aqoxy2G03162 Aquilegia oxysepala HOM05D003567 ORTHO05D004117 1.8e-76 290.4 371 48.5
TAR365G0081 Trochodendron aralioides HOM05D003567 ORTHO05D004117 2.7e-69 266.5 371 42.0
Dinv40231 Davidia involucrata HOM05D003567 ORTHO05D004117 5.9e-64 248.8 376 41.8
Nn3g21221 Nelumbo nucifera HOM05D003567 ORTHO05D004117 1.8e-57 227.3 361 39.3
GSVIVG01022012001 Vitis vinifera HOM05D003567 ORTHO05D004117 9.5e-54 214.9 360 38.9
TAR362G0113 Trochodendron aralioides HOM05D003567 ORTHO05D004117 8.3e-50 201.8 347 39.2
PGR031G3379 Punica granatum HOM05D003567 ORTHO05D004117 2.4e-49 200.3 363 37.5
Eucgr.H04432 Eucalyptus grandis HOM05D003567 ORTHO05D004117 3.5e-48 196.4 337 37.1
MD04G1212700 Malus domestica HOM05D003567 ORTHO05D004117 7.8e-48 195.3 402 33.8
Cpa.g.sc84.115 Carica papaya HOM05D003567 ORTHO05D004117 1.5e-46 191.0 380 37.1
Cpa.g.sc84.116 Carica papaya HOM05D003567 ORTHO05D004117 1.5e-46 191.0 304 36.5
Lj9A677G34 Lonicera japonica HOM05D003567 ORTHO05D004117 9.5e-46 188.3 323 39.9
Actinidia30900 Actinidia chinensis HOM05D003567 ORTHO05D004117 1.2e-45 188.0 328 38.1
FvH4_6g04940 Fragaria vesca HOM05D003567 ORTHO05D004117 2.1e-45 187.2 392 32.7
Oeu033946.2 Olea europaea HOM05D003567 ORTHO05D004117 2.8e-45 186.8 357 36.7
Nn3g21224 Nelumbo nucifera HOM05D003567 ORTHO05D004117 3.6e-45 186.4 404 33.2
Aa31LG2G12110 Aethionema arabicum HOM05D003567 ORTHO05D004117 8.0e-45 185.3 340 35.9
CDE05G1895 Ceratophyllum demersum HOM05D003567 ORTHO05D004117 1.0e-44 184.9 366 35.0
Sed0008957 Sechium edule HOM05D003567 ORTHO05D004117 2.3e-44 183.7 338 35.5
AUR62000902 Chenopodium quinoa HOM05D003567 ORTHO05D004117 4.0e-44 183.0 337 36.2
PGR031G0264 Punica granatum HOM05D003567 ORTHO05D004117 4.0e-44 183.0 402 33.3
CSS0000473 Camellia sinensis var. sinensis HOM05D003567 ORTHO05D004117 5.2e-44 182.6 404 32.9
CSS0010999 Camellia sinensis var. sinensis HOM05D003567 ORTHO05D004117 5.2e-44 182.6 404 32.9
RcHm_v2.0_Chr3g0453431 Rosa chinensis HOM05D003567 ORTHO05D004117 6.8e-44 182.2 387 33.3
FAN14G3462 Fragaria x ananassa HOM05D003567 ORTHO05D004117 1.2e-43 181.4 340 36.5
Ciclev10001775m.g Citrus clementina HOM05D003567 ORTHO05D004117 2.6e-43 180.3 394 32.2
Lalb_Chr18g0045341 Lupinus albus HOM05D003567 ORTHO05D004117 2.6e-43 180.3 381 33.1
Duzib177G1144 Durio zibethinus HOM05D003567 ORTHO05D004117 4.4e-43 179.5 372 33.1
Gohir.D11G270600 Gossypium hirsutum HOM05D003567 ORTHO05D004117 4.4e-43 179.5 372 33.6
Gorai.007G291100 Gossypium raimondii HOM05D003567 ORTHO05D004117 4.4e-43 179.5 372 33.6
Sopen02g034720 Solanum pennellii HOM05D003567 ORTHO05D004117 4.4e-43 179.5 364 34.3
Lj1g0016651 Lotus japonicus HOM05D003567 ORTHO05D004117 5.8e-43 179.1 382 32.7
PGSC0003DMG400010083 Solanum tuberosum HOM05D003567 ORTHO05D004117 5.8e-43 179.1 364 34.3
VMungo0540G1876 Vigna mungo HOM05D003567 ORTHO05D004117 5.8e-43 179.1 408 32.1
BolC9t53498H Brassica oleracea HOM05D003567 ORTHO05D004117 7.5e-43 178.7 405 32.1
Eucgr.H04431 Eucalyptus grandis HOM05D003567 ORTHO05D004117 7.5e-43 178.7 367 33.5
Sed0017789 Sechium edule HOM05D003567 ORTHO05D004117 7.5e-43 178.7 373 34.9
Manes.08G124900 Manihot esculenta HOM05D003567 ORTHO05D004117 9.8e-43 178.3 400 32.8
Aqoxy2G03161 Aquilegia oxysepala HOM05D003567 ORTHO05D004117 1.3e-42 177.9 379 34.0
BcaB04g19661 Brassica carinata HOM05D003567 ORTHO05D004117 1.7e-42 177.6 405 32.1
C09p05690 Brassica napus HOM05D003567 ORTHO05D004117 1.7e-42 177.6 405 32.1
ECA246G0369 Erigeron canadensis HOM05D003567 ORTHO05D004117 1.7e-42 177.6 343 37.3
Thecc.05G296900 Theobroma cacao HOM05D003567 ORTHO05D004117 2.2e-42 177.2 372 33.1
Atru.chr2.536 Acer truncatum HOM05D003567 ORTHO05D004117 2.9e-42 176.8 368 33.4
A09p05230 Brassica napus HOM05D003567 ORTHO05D004117 2.9e-42 176.8 405 31.9
BcaB04g19664 Brassica carinata HOM05D003567 ORTHO05D004117 3.7e-42 176.4 405 31.9
BcaC04g23684 Brassica carinata HOM05D003567 ORTHO05D004117 3.7e-42 176.4 405 31.9
BraA09t36162Z Brassica rapa HOM05D003567 ORTHO05D004117 3.7e-42 176.4 405 31.6
Solyc08g042140.3 Solanum lycopersicum HOM05D003567 ORTHO05D004117 3.7e-42 176.4 351 33.9
Glyma.03G241900 Glycine max HOM05D003567 ORTHO05D004117 6.4e-42 175.6 390 32.1
PSO170G0105 Papaver somniferum HOM05D003567 ORTHO05D004117 8.3e-42 175.3 366 33.3
arahy.Tifrunner.gnm1.ann1.BBX3WJ Arachis hypogaea HOM05D003567 ORTHO05D004117 1.1e-41 174.9 363 32.5
Phvul.006G095900 Phaseolus vulgaris HOM05D003567 ORTHO05D004117 1.4e-41 174.5 364 33.0
Cc02_g32800 Coffea canephora HOM05D003567 ORTHO05D004117 1.9e-41 174.1 381 33.9
Rhsim05G0146400 Rhododendron simsii HOM05D003567 ORTHO05D004117 1.9e-41 174.1 372 32.8
GSVIVG01022011001 Vitis vinifera HOM05D003567 ORTHO05D004117 2.4e-41 173.7 367 34.6
AL1G65120 Arabidopsis lyrata HOM05D003567 ORTHO05D004117 4.1e-41 172.9 334 36.8
BcaC04g23687 Brassica carinata HOM05D003567 ORTHO05D004117 4.1e-41 172.9 405 32.1
Sabra13G0029300 Salix brachista HOM05D003567 ORTHO05D004117 4.1e-41 172.9 370 32.4
COL.COLO4_13563 Corchorus olitorius HOM05D003567 ORTHO05D004117 7.0e-41 172.2 367 33.0
CAN.G836.16 Capsicum annuum HOM05D003567 ORTHO05D004117 9.2e-41 171.8 364 33.5
Nitab4.5_0006272g0050 Nicotiana tabacum HOM05D003567 ORTHO05D004117 9.2e-41 171.8 348 35.1
Psat3g009280 Pisum sativum HOM05D003567 ORTHO05D004117 9.2e-41 171.8 392 30.9
CANSAT54G0395 Cannabis sativa HOM05D003567 ORTHO05D004117 1.2e-40 171.4 379 31.7
Nitab4.5_0008257g0040 Nicotiana tabacum HOM05D003567 ORTHO05D004117 1.6e-40 171.0 364 33.0
CsaV3_1G039400 Cucumis sativus L. HOM05D003567 ORTHO05D004117 2.0e-40 170.6 386 33.9
ATR0487G007 Amborella trichopoda HOM05D003567 ORTHO05D004117 2.7e-40 170.2 364 32.1
Thhalv10004533m.g Eutrema salsugineum HOM05D003567 ORTHO05D004117 2.7e-40 170.2 367 32.7
THA.LOC104802813 Tarenaya hassleriana HOM05D003567 ORTHO05D004117 2.7e-40 170.2 372 32.5
CARHR185910 Cardamine hirsuta HOM05D003567 ORTHO05D004117 3.5e-40 169.9 380 32.9
AT5G27290 Arabidopsis thaliana HOM05D003567 ORTHO05D004117 4.6e-40 169.5 380 32.6
THA.LOC104805845 Tarenaya hassleriana HOM05D003567 ORTHO05D004117 4.6e-40 169.5 334 34.7
AUR62005073 Chenopodium quinoa HOM05D003567 ORTHO05D004117 6.0e-40 169.1 370 32.7
DCAR_016974 Daucus carota HOM05D003567 ORTHO05D004117 6.0e-40 169.1 400 31.2
AL6G39790 Arabidopsis lyrata HOM05D003567 ORTHO05D004117 7.8e-40 168.7 379 32.2
Peaxi162Scf00338g00312 Petunia axillaris HOM05D003567 ORTHO05D004117 7.8e-40 168.7 333 35.1
Potri.013G029000 Populus trichocarpa HOM05D003567 ORTHO05D004117 1.3e-39 167.9 359 34.8
Thhalv10023619m.g Eutrema salsugineum HOM05D003567 ORTHO05D004117 1.7e-39 167.5 328 35.1
Medtr7g114070 Medicago truncatula HOM05D003567 ORTHO05D004117 1.7e-39 167.5 381 31.5
arahy.Tifrunner.gnm1.ann1.86SZEE Arachis hypogaea HOM05D003567 ORTHO05D004117 2.3e-39 167.2 363 31.7
Carub.0002s0892 Capsella rubella HOM05D003567 ORTHO05D004117 2.3e-39 167.2 319 37.0
SpUn0002_0170 Schrenkiella parvula HOM05D003567 ORTHO05D004117 3.0e-39 166.8 320 35.0
TPR.G21793 Trifolium pratense HOM05D003567 ORTHO05D004117 3.0e-39 166.8 388 31.2
PSO302G0281 Papaver somniferum HOM05D003567 ORTHO05D004117 3.9e-39 166.4 367 32.7
Cfa006520 Carpinus fangiana HOM05D003567 ORTHO05D004117 5.0e-39 166.0 379 32.2
Duzib106G0722 Durio zibethinus HOM05D003567 ORTHO05D004117 5.0e-39 166.0 336 33.3
BraA01t02844Z Brassica rapa HOM05D003567 ORTHO05D004117 6.6e-39 165.6 317 36.3
Carub.0006s2522 Capsella rubella HOM05D003567 ORTHO05D004117 6.6e-39 165.6 380 32.4
CAN.G566.56 Capsicum annuum HOM05D003567 ORTHO05D004117 8.6e-39 165.2 302 36.1
Lj9A677T42 Lonicera japonica HOM05D003567 ORTHO05D004117 8.6e-39 165.2 395 33.2
PSO170G3637 Papaver somniferum HOM05D003567 ORTHO05D004117 8.6e-39 165.2 401 31.4
AT1G54680 Arabidopsis thaliana HOM05D003567 ORTHO05D004117 1.1e-38 164.9 328 34.8
Sp2g20530 Schrenkiella parvula HOM05D003567 ORTHO05D004117 1.1e-38 164.9 367 33.0
Hund07025 Selenicereus undatus HOM05D003567 ORTHO05D004117 1.1e-38 164.9 326 35.6
BcaC09g49610 Brassica carinata HOM05D003567 ORTHO05D004117 1.9e-38 164.1 318 35.5
C01p34500 Brassica napus HOM05D003567 ORTHO05D004117 1.9e-38 164.1 318 35.5
BolC1t03421H Brassica oleracea HOM05D003567 ORTHO05D004117 1.9e-38 164.1 318 35.5
CARHR055820 Cardamine hirsuta HOM05D003567 ORTHO05D004117 2.5e-38 163.7 333 33.0
Os01g0382700 Oryza sativa ssp. japonica HOM05D003567 ORTHO05D004117 3.3e-38 163.3 372 33.1
Ca_09384_v3 Cicer arietinum L. HOM05D003567 ORTHO05D004117 4.3e-38 162.9 344 34.0
BcaB04g20139 Brassica carinata HOM05D003567 ORTHO05D004117 7.3e-38 162.2 319 35.4
Lsat_1_v5_gn_5_38921 Lactuca sativa HOM05D003567 ORTHO05D004117 7.3e-38 162.2 368 32.1
QL03p003527 Quercus lobata HOM05D003567 ORTHO05D004117 7.3e-38 162.2 403 31.5
SGA_v2.0_scaffold21G09407 Striga asiatica HOM05D003567 ORTHO05D004117 7.3e-38 162.2 364 32.4
SalBow1G3301 Salvia bowleyana HOM05D003567 ORTHO05D004117 9.5e-38 161.8 370 31.6
Aa31LG11G9050 Aethionema arabicum HOM05D003567 ORTHO05D004117 1.2e-37 161.4 367 31.3
ClCG03G016600 Citrullus lanatus HOM05D003567 ORTHO05D004117 1.2e-37 161.4 387 31.5
QL03p002916 Quercus lobata HOM05D003567 ORTHO05D004117 1.6e-37 161.0 403 31.0
HanXRQChr16g0512311 Helianthus annuus HOM05D003567 ORTHO05D004117 2.8e-37 160.2 365 32.1
SEGI_02572 Sequoiadendron giganteum HOM05D003567 ORTHO05D004117 2.8e-37 160.2 360 33.3
ClCG03G016590 Citrullus lanatus HOM05D003567 ORTHO05D004117 4.7e-37 159.5 372 30.9
EL10Ac4g09285 Beta vulgaris HOM05D003567 ORTHO05D004117 6.2e-37 159.1 323 33.7
Migut.L01511 Erythranthe guttata HOM05D003567 ORTHO05D004117 1.4e-36 157.9 334 35.9
Peaxi162Scf00071g00838 Petunia axillaris HOM05D003567 ORTHO05D004117 1.4e-36 157.9 300 36.7
Sc06g0003450 Simmondsia chinensis HOM05D003567 ORTHO05D004117 1.8e-36 157.5 376 32.2
SGA_v2.0_scaffold21G09406 Striga asiatica HOM05D003567 ORTHO05D004117 1.8e-36 157.5 334 35.6
BcaC05g25942 Brassica carinata HOM05D003567 ORTHO05D004117 4.0e-36 156.4 308 35.4
ECA246G1301 Erigeron canadensis HOM05D003567 ORTHO05D004117 6.8e-36 155.6 372 32.0
unitig_578.g16416 Utricularia gibba HOM05D003567 ORTHO05D004117 1.5e-35 154.5 364 30.5
Migut.L01512 Erythranthe guttata HOM05D003567 ORTHO05D004117 2.0e-35 154.1 360 30.3
Solyc02g090020.4 Solanum lycopersicum HOM05D003567 ORTHO05D004117 2.6e-35 153.7 303 36.0
Nitab4.5_0000327g0090 Nicotiana tabacum HOM05D003567 ORTHO05D004117 9.8e-35 151.8 364 30.2
Cc02_g32780 Coffea canephora HOM05D003567 ORTHO05D004117 1.3e-34 151.4 213 40.4
Haze_04266 Corylus avellana HOM05D003567 ORTHO05D004117 2.9e-34 150.2 350 34.0
HanXRQChr12g0379821 Helianthus annuus HOM05D003567 ORTHO05D004117 6.4e-34 149.1 315 33.3
Rhsim07G0178200 Rhododendron simsii HOM05D003567 ORTHO05D004117 2.1e-32 144.1 170 50.6
CiPaw.08G174300 Carya illinoinensis HOM05D003567 ORTHO05D004117 2.7e-32 143.7 296 35.1
Oeu025239.1 Olea europaea HOM05D003567 ORTHO05D004117 4.6e-32 142.9 399 28.8
CiPaw.08G174900 Carya illinoinensis HOM05D003567 ORTHO05D004117 5.1e-31 139.4 368 29.3
CsaV3_1G039390 Cucumis sativus L. HOM05D003567 ORTHO05D004117 5.1e-31 139.4 210 39.0
DCAR_003305 Daucus carota HOM05D003567 ORTHO05D004117 6.6e-31 139.0 333 33.3
vmacro05046 Vaccinium macrocarpon HOM05D003567 ORTHO05D004117 9.5e-30 135.2 194 42.8
CBR_g53664 Chara braunii HOM05D003567 ORTHO05D004117 1.2e-29 134.8 358 29.9
vmacro19654 Vaccinium macrocarpon HOM05D003567 ORTHO05D004117 1.6e-29 134.4 428 29.2
Nitab4.5_0000027g0510 Nicotiana tabacum HOM05D003567 ORTHO05D004117 3.6e-29 133.3 304 32.6
MELO3C015365.2 Cucumis melo HOM05D003567 ORTHO05D004117 6.2e-29 132.5 357 31.7
Lsat_1_v5_gn_5_39020 Lactuca sativa HOM05D003567 ORTHO05D004117 1.4e-25 121.3 219 39.3
PSO302G0180 Papaver somniferum HOM05D003567 ORTHO05D004117 4.1e-25 119.8 353 28.3
MELO3C029314.2 Cucumis melo HOM05D003567 ORTHO05D004117 9.2e-25 118.6 192 37.0
SMO367G0890 Selaginella moellendorffii HOM05D003567 ORTHO05D004117 2.7e-24 117.1 305 30.8
Pp3c5_10750 Physcomitrium patens HOM05D003567 ORTHO05D004117 6.0e-24 115.9 305 28.9
Glyma.19G239300 Glycine max HOM05D003567 ORTHO05D004117 1.7e-23 114.4 223 31.8
Prupe.6G333000 Prunus persica HOM05D003567 ORTHO05D004117 1.7e-23 114.4 230 36.5
AL7G51030 Arabidopsis lyrata HOM05D003567 ORTHO05D004117 8.6e-23 112.1 189 40.7
Gohir.A11G260300 Gossypium hirsutum HOM05D003567 ORTHO05D004117 8.6e-23 112.1 215 36.7
Actinidia19813 Actinidia chinensis HOM05D003567 ORTHO05D004117 2.5e-22 110.5 291 29.9
A01p27100 Brassica napus HOM05D003567 ORTHO05D004117 2.5e-22 110.5 165 43.0
AUR62033882 Chenopodium quinoa HOM05D003567 ORTHO05D004117 1.2e-21 108.2 163 42.3
SalBow1G7230 Salvia bowleyana HOM05D003567 ORTHO05D004117 3.6e-21 106.7 332 29.8
AagrBONN_evm.TU.Sc2ySwM_344.4623 Anthoceros agrestis HOM05D003567 ORTHO05D004117 6.2e-21 105.9 211 34.1
Dinv22925 Davidia involucrata HOM05D003567 ORTHO05D004117 8.1e-21 105.5 199 36.7
Mapoly0059s0075 Marchantia polymorpha HOM05D003567 ORTHO05D004117 1.1e-20 105.1 220 31.4
CiPaw.08G170300 Carya illinoinensis HOM05D003567 ORTHO05D004117 1.4e-20 104.8 213 35.2
Sopen08g012740 Solanum pennellii HOM05D003567 ORTHO05D004117 8.9e-20 102.1 185 35.7
MCO11G582 Micromonas commoda HOM05D003567 ORTHO05D004117 3.8e-18 96.7 273 27.1
MBI10_g37183_MAGBIO Magnolia biondii HOM05D003567 ORTHO05D004117 8.4e-18 95.5 306 29.4
Sopen08g012750 Solanum pennellii HOM05D003567 ORTHO05D004117 3.2e-17 93.6 96 49.0
Cre01.g055412 Chlamydomonas reinhardtii HOM05D003567 ORTHO05D004117 9.2e-17 92.0 93 46.2
CiPaw.08G171500 Carya illinoinensis HOM05D003567 ORTHO05D004117 6.0e-16 89.4 297 25.9
MBI10_g29587_MAGBIO Magnolia biondii HOM05D003567 ORTHO05D004117 7.8e-16 89.0 119 46.2
C05p18930 Brassica napus HOM05D003567 ORTHO05D004117 1.7e-15 87.8 130 42.3
CiPaw.08G169100 Carya illinoinensis HOM05D003567 ORTHO05D004117 1.7e-15 87.8 237 31.6
AUR62043825 Chenopodium quinoa HOM05D003567 ORTHO05D004117 8.7e-15 85.5 305 25.9
Manes.09G161401 Manihot esculenta HOM05D003567 ORTHO05D004117 1.5e-14 84.7 111 41.4
CiPaw.08G171000 Carya illinoinensis HOM05D003567 ORTHO05D004117 4.3e-14 83.2 287 25.4
Duzib128G1838 Durio zibethinus HOM05D003567 ORTHO05D004117 9.6e-14 82.0 93 41.9
PRCOL_00003025 Prasinoderma coloniale HOM05D003567 ORTHO05D004117 2.1e-13 80.9 213 28.2
MSTRG.10545 Avicennia marina HOM05D003567 ORTHO05D004117 2.8e-13 80.5 145 38.6
Cc02_g32790 Coffea canephora HOM05D003567 ORTHO05D004117 6.2e-13 79.3 82 52.4
MELO3C029313.2 Cucumis melo HOM05D003567 ORTHO05D004117 1.1e-12 78.6 102 40.2
Zm00001eb131930 Zea mays HOM05D003567 ORTHO05D004117 1.4e-12 78.2 133 40.6
AUR62026190 Chenopodium quinoa HOM05D003567 ORTHO05D004117 5.3e-12 76.3 91 41.8
AUR62025002 Chenopodium quinoa HOM05D003567 ORTHO05D004117 2.0e-11 74.3 226 28.8
AUR62030520 Chenopodium quinoa HOM05D003567 ORTHO05D004117 2.0e-11 74.3 226 28.8
AUR62032573 Chenopodium quinoa HOM05D003567 ORTHO05D004117 2.0e-11 74.3 226 28.8
AUR62037588 Chenopodium quinoa HOM05D003567 ORTHO05D004117 2.0e-11 74.3 226 28.8
MSTRG.10546 Avicennia marina HOM05D003567 ORTHO05D004117 2.9e-10 70.5 54 50.0
CBR_g22370 Chara braunii HOM05D003567 ORTHO05D004117 2.4e-09 67.4 132 35.6
DCAR_031426 Daucus carota HOM05D002608 ORTHO05D013040 2.4e-09 67.4 73 43.8
Cfa016693 Carpinus fangiana HOM05D000079 ORTHO05D000211 4.2e-09 66.6 73 49.3
CiPaw.08G175300 Carya illinoinensis HOM05D003567 ORTHO05D004117 7.1e-09 65.9 63 52.4
Actinidia28391 Actinidia chinensis HOM05D003567 ORTHO05D004117 1.6e-08 64.7 83 49.4
CiPaw.08G169600 Carya illinoinensis HOM05D003567 ORTHO05D004117 1.3e-07 61.6 153 31.4
Lsat_1_v5_gn_5_38361 Lactuca sativa HOM05D003567 ORTHO05D004117 1.1e-06 58.5 54 57.4
CiPaw.08G176400 Carya illinoinensis HOM05D003567 ORTHO05D004117 1.5e-06 58.2 153 30.1


User provided reference genes

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