Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 1.2e-245 852.8 459 100.0
PSO478G4763 Papaver somniferum HOM05D006409 ORTHO05D008250 1.5e-224 782.7 460 92.8
PSO017G5610 Papaver somniferum HOM05D006409 ORTHO05D008250 5.5e-198 694.5 417 91.6
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 4.3e-110 402.5 428 57.0
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 5.2e-108 395.6 465 52.9
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 5.1e-87 325.9 485 44.7
ATR0064G033 Amborella trichopoda HOM05D006409 ORTHO05D008250 9.0e-84 315.1 493 42.0
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 1.3e-82 311.2 378 51.6
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 2.2e-82 310.5 381 50.9
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 1.9e-81 307.4 383 50.9
QL10p018676 Quercus lobata HOM05D006409 ORTHO05D008250 3.0e-79 300.1 399 48.1
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 7.4e-78 295.4 373 49.1
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 1.6e-77 294.3 383 49.3
Oeu014392.1 Olea europaea HOM05D006409 ORTHO05D006262 1.6e-77 294.3 394 47.5
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 2.2e-77 293.9 383 48.8
Duzib084G0027 Durio zibethinus HOM05D006409 ORTHO05D008250 3.7e-77 293.1 399 46.6
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 4.8e-77 292.7 397 47.1
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 1.1e-76 291.6 383 49.3
Rhsim08G0148500 Rhododendron simsii HOM05D006409 ORTHO05D008250 2.0e-75 287.3 373 49.1
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 1.7e-74 284.3 385 47.3
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 6.5e-74 282.3 375 48.8
CiPaw.11G050000 Carya illinoinensis HOM05D006409 ORTHO05D008250 1.9e-73 280.8 387 46.5
Prupe.5G201100 Prunus persica HOM05D006409 ORTHO05D008250 2.7e-72 276.9 402 46.0
Manes.14G084000 Manihot esculenta HOM05D006409 ORTHO05D008250 6.1e-72 275.8 374 47.6
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 1.3e-71 274.6 389 45.5
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.3e-69 268.1 379 47.0
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 2.2e-69 267.3 377 45.1
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 2.8e-69 266.9 351 49.3
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 3.7e-69 266.5 373 45.8
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 6.3e-69 265.8 379 46.2
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 1.4e-68 264.6 366 47.0
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 3.4e-67 260.0 393 44.5
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 1.0e-66 258.5 413 42.6
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 1.3e-66 258.1 376 45.5
CDE06G0998 Ceratophyllum demersum HOM05D006409 ORTHO05D008250 8.5e-66 255.4 384 42.7
DCAR_026015 Daucus carota HOM05D006409 ORTHO05D008250 2.5e-65 253.8 367 46.3
Cc00_g02320 Coffea canephora HOM05D006409 ORTHO05D008250 1.6e-64 251.1 369 46.1
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 2.7e-64 250.4 338 48.5
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 2.7e-64 250.4 387 45.2
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 7.9e-64 248.8 374 42.8
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 7.9e-64 248.8 373 44.5
Glyma.17G076800 Glycine max HOM05D006409 ORTHO05D008250 1.4e-63 248.1 387 44.4
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 2.3e-63 247.3 382 43.7
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 3.0e-63 246.9 385 42.1
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 3.0e-63 246.9 385 41.6
Gohir.D12G183500 Gossypium hirsutum HOM05D006409 ORTHO05D008250 1.1e-62 245.0 389 42.4
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 2.0e-62 244.2 318 47.8
TWI81G1094 Tripterygium wilfordii HOM05D006409 ORTHO05D008250 2.0e-62 244.2 377 43.0
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 2.0e-62 244.2 400 43.8
FvH4_5g14277 Fragaria vesca HOM05D006409 ORTHO05D008250 3.3e-62 243.4 338 46.7
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 4.4e-62 243.0 359 46.0
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 1.7e-61 241.1 377 44.0
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 2.8e-61 240.4 375 43.2
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 2.8e-61 240.4 375 43.2
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 3.7e-61 240.0 381 43.8
Gorai.008G196800 Gossypium raimondii HOM05D006409 ORTHO05D008250 4.8e-61 239.6 372 44.1
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 6.3e-61 239.2 369 45.0
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 6.3e-61 239.2 369 43.6
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 8.2e-61 238.8 385 41.0
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 4.1e-60 236.5 387 43.4
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 1.2e-59 235.0 369 44.2
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 2.6e-59 233.8 371 41.5
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 4.5e-59 233.0 398 42.5
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 4.5e-59 233.0 358 45.8
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 1.3e-58 231.5 382 42.9
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 2.2e-58 230.7 377 42.4
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 3.8e-58 229.9 379 40.9
RcHm_v2.0_Chr7g0182601 Rosa chinensis HOM05D006409 ORTHO05D008250 3.8e-58 229.9 384 43.8
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 5.5e-57 226.1 380 41.1
Zm00001eb108440 Zea mays HOM05D006409 ORTHO05D008250 7.2e-57 225.7 433 38.6
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 9.4e-57 225.3 371 42.3
MELO3C002015.2 Cucumis melo HOM05D006409 ORTHO05D008250 4.7e-56 223.0 379 39.6
COL.COLO4_22753 Corchorus olitorius HOM05D006409 ORTHO05D008250 6.1e-56 222.6 379 41.2
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 8.0e-56 222.2 318 47.8
CANSAT80G0413 Cannabis sativa HOM05D006409 ORTHO05D008250 1.8e-55 221.1 349 43.0
CsaV3_1G005860 Cucumis sativus L. HOM05D006409 ORTHO05D008250 2.3e-55 220.7 380 39.2
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 3.9e-55 219.9 370 41.4
FAN08G0388 Fragaria x ananassa HOM05D006409 ORTHO05D008250 5.2e-55 219.5 379 42.5
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 1.5e-54 218.0 384 40.4
Gohir.A12G180800 Gossypium hirsutum HOM05D006409 ORTHO05D008250 1.5e-54 218.0 389 40.1
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 2.0e-54 217.6 371 42.0
Os07g0598700 Oryza sativa ssp. japonica HOM05D006409 ORTHO05D008250 2.0e-54 217.6 427 38.2
ClCG04G011930 Citrullus lanatus HOM05D006409 ORTHO05D008250 1.3e-53 214.9 380 38.9
Atru.chr9.377 Acer truncatum HOM05D006409 ORTHO05D008250 2.2e-53 214.2 308 44.8
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 8.2e-53 212.2 372 40.1
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 8.2e-53 212.2 372 40.1
Actinidia04843 Actinidia chinensis HOM05D006409 ORTHO05D008250 1.1e-52 211.8 254 50.4
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 1.8e-52 211.1 363 39.1
Psat4g048440 Pisum sativum HOM05D006409 ORTHO05D008250 3.1e-52 210.3 316 44.3
Lj5A105T60 Lonicera japonica HOM05D006409 ORTHO05D008250 2.6e-51 207.2 326 42.6
TPR.G2042 Trifolium pratense HOM05D006409 ORTHO05D008250 5.9e-51 206.1 388 39.7
HanXRQChr09g0270151 Helianthus annuus HOM05D006409 ORTHO05D008250 7.7e-51 205.7 368 39.9
AUR62021594 Chenopodium quinoa HOM05D006409 ORTHO05D008250 9.4e-49 198.7 340 39.4
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 9.4e-49 198.7 376 39.4
Migut.I00315 Erythranthe guttata HOM05D006409 ORTHO05D008250 2.1e-48 197.6 403 38.2
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 1.0e-42 178.7 270 45.6
AUR62008498 Chenopodium quinoa HOM05D006409 ORTHO05D008250 1.0e-42 178.7 340 37.4
ECA232G2526 Erigeron canadensis HOM05D006409 ORTHO05D008250 1.7e-42 177.9 371 37.5
Sc04g0003080 Simmondsia chinensis HOM05D006409 ORTHO05D008250 5.0e-42 176.4 355 39.2
Sed0008489 Sechium edule HOM05D006409 ORTHO05D008250 2.5e-41 174.1 382 35.9
Hund02605 Selenicereus undatus HOM05D006409 ORTHO05D008250 1.2e-40 171.8 322 38.5
Ca_21789_v3 Cicer arietinum L. HOM05D006409 ORTHO05D008250 1.5e-38 164.9 276 43.1
Ah.02g113920 Amaranthus hybridus HOM05D006409 ORTHO05D008250 3.4e-38 163.7 318 37.4
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 3.7e-37 160.2 274 43.1
EL10Ac5g11100 Beta vulgaris HOM05D006409 ORTHO05D008250 4.2e-33 146.7 353 33.1
HanXRQChr16g0502261 Helianthus annuus HOM05D006409 ORTHO05D008250 4.2e-33 146.7 342 35.7
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 5.7e-30 136.3 287 38.7
Duzib068G0538 Durio zibethinus HOM05D006409 ORTHO05D008250 1.6e-27 128.3 206 40.8
SEGI_28191 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 2.0e-27 127.9 428 26.2
SEGI_37085 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 2.0e-27 127.9 428 26.2
Lsat_1_v5_gn_4_110201 Lactuca sativa HOM05D006409 ORTHO05D008250 6.6e-26 122.9 351 33.0
BcaC02g08699 Brassica carinata HOM05D006409 ORTHO05D008250 4.6e-19 100.1 229 36.7
Actinidia12838 Actinidia chinensis HOM05D006409 ORTHO05D008250 2.1e-16 91.3 80 63.8
SGA_v2.0_scaffold25G10967 Striga asiatica HOM05D006409 ORTHO05D008250 1.2e-14 85.5 329 29.5
arahy.Tifrunner.gnm1.ann1.LPT8KM Arachis hypogaea HOM05D006409 ORTHO05D008250 2.0e-14 84.7 73 63.0
C04p51600 Brassica napus HOM05D006409 ORTHO05D008250 1.9e-12 78.2 85 55.3
C04p51590 Brassica napus HOM05D006409 ORTHO05D008250 3.2e-12 77.4 94 48.9
C04p51610 Brassica napus HOM05D006409 ORTHO05D008250 3.6e-08 63.9 155 36.8


User provided reference genes

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