Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 7.6e-175 617.1 315 100.0
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 4.3e-109 398.7 298 70.1
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 8.9e-107 391.0 286 70.6
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 3.4e-106 389.0 229 82.1
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 5.7e-106 388.3 300 67.7
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 2.2e-105 386.3 303 67.7
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 2.9e-105 386.0 303 67.0
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 3.7e-105 385.6 291 66.7
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 2.4e-104 382.9 299 65.9
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 3.2e-104 382.5 298 66.8
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 5.4e-104 381.7 278 69.4
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 9.2e-104 380.9 286 67.8
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 1.6e-103 380.2 290 68.3
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 2.0e-103 379.8 266 71.4
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 3.5e-103 379.0 295 67.5
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 5.9e-103 378.3 314 64.0
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 7.8e-103 377.9 286 68.5
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 1.0e-102 377.5 281 69.4
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 1.0e-102 377.5 281 69.4
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 2.3e-102 376.3 292 67.5
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 3.0e-102 375.9 229 79.0
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 3.9e-102 375.6 297 65.0
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 3.9e-102 375.6 274 70.1
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 5.0e-102 375.2 309 63.4
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 5.0e-102 375.2 303 66.3
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 6.6e-102 374.8 266 69.2
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 6.6e-102 374.8 266 69.2
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 6.6e-102 374.8 265 70.2
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 1.1e-101 374.0 286 66.1
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 1.1e-101 374.0 294 67.0
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 1.1e-101 374.0 301 66.4
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 1.5e-101 373.6 296 64.5
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 1.5e-101 373.6 302 65.2
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 1.5e-101 373.6 271 71.2
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 1.9e-101 373.2 273 70.0
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 1.9e-101 373.2 266 69.2
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 2.5e-101 372.9 314 62.7
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 7.3e-101 371.3 273 71.4
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 7.3e-101 371.3 265 72.5
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 9.5e-101 370.9 309 64.4
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 1.6e-100 370.2 266 68.8
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 1.6e-100 370.2 295 63.7
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 2.1e-100 369.8 297 63.6
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 2.1e-100 369.8 280 68.2
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 2.8e-100 369.4 294 63.9
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 2.8e-100 369.4 244 75.0
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 2.8e-100 369.4 277 67.5
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 3.6e-100 369.0 283 65.0
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 3.6e-100 369.0 278 66.9
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 4.7e-100 368.6 315 61.9
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 6.2e-100 368.2 294 64.6
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 6.2e-100 368.2 268 70.5
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 8.0e-100 367.9 272 67.3
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 1.1e-99 367.5 294 64.3
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 1.1e-99 367.5 294 64.3
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 1.1e-99 367.5 294 64.3
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 1.1e-99 367.5 287 67.2
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 1.4e-99 367.1 294 63.6
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 1.8e-99 366.7 294 63.3
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 2.3e-99 366.3 298 64.4
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 2.3e-99 366.3 302 63.6
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 3.1e-99 365.9 307 61.6
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 5.2e-99 365.2 281 67.6
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 5.2e-99 365.2 274 69.0
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 6.8e-99 364.8 274 68.6
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 1.5e-98 363.6 288 65.3
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 1.5e-98 363.6 287 66.9
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 1.5e-98 363.6 273 68.9
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 2.6e-98 362.8 276 67.8
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 2.6e-98 362.8 270 69.3
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 5.8e-98 361.7 293 63.5
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 7.5e-98 361.3 240 75.8
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 7.5e-98 361.3 232 75.9
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 9.8e-98 360.9 232 75.0
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 1.3e-97 360.5 281 66.5
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 2.2e-97 359.8 284 64.4
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 2.9e-97 359.4 337 59.3
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 3.7e-97 359.0 261 70.9
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 4.9e-97 358.6 270 70.0
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 1.4e-96 357.1 301 63.1
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 1.9e-96 356.7 229 75.1
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 5.4e-96 355.1 285 65.3
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 7.8e-95 351.3 297 64.6
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 1.7e-94 350.1 296 64.2
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 6.8e-91 338.2 302 58.6
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 6.8e-91 338.2 234 70.1
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 3.4e-90 335.9 233 72.5
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 7.5e-90 334.7 271 67.5
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 9.2e-88 327.8 289 60.2
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 2.1e-87 326.6 269 65.8
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 1.0e-86 324.3 255 66.3
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 8.9e-83 311.2 226 71.2
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 1.9e-80 303.5 260 64.2
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 5.1e-78 295.4 244 61.5
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 1.5e-74 283.9 223 67.7
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 5.8e-74 282.0 198 72.2
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 1.1e-72 277.7 210 66.7
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 1.9e-72 276.9 197 70.6
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 1.7e-70 270.4 253 56.1
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 9.9e-66 254.6 220 60.0
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 8.4e-57 224.9 178 71.3
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 1.6e-55 220.7 238 51.7
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 3.0e-54 216.5 136 73.5
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 1.4e-51 207.6 195 56.9
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.3e-45 186.4 118 77.1
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 7.4e-45 185.3 111 75.7
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 2.8e-44 183.3 111 74.8
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 1.0e-38 164.9 124 66.1
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 4.5e-34 149.4 217 42.9
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 1.3e-25 121.3 75 73.3
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 3.2e-24 116.7 81 67.9
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 5.2e-22 109.4 211 37.9
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 1.7e-17 94.4 254 30.7
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 2.3e-14 84.0 63 69.8
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 3.8e-09 66.6 45 71.1
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 8.5e-09 65.5 203 30.0
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 4.7e-07 59.7 33 75.8


User provided reference genes

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