Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 1.7e-260 902.1 464 100.0
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 4.6e-245 850.9 470 94.3
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 1.4e-161 573.5 467 66.0
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 3.0e-159 565.8 472 65.9
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 9.5e-158 560.8 464 66.4
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 5.1e-151 538.5 469 63.3
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 2.0e-147 526.6 404 68.8
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 8.4e-146 521.2 472 61.0
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 5.4e-145 518.5 367 72.2
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 2.7e-144 516.2 465 61.7
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 2.7e-144 516.2 470 61.3
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 1.3e-143 513.8 397 69.0
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 3.3e-142 509.2 415 65.1
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 1.3e-141 507.3 408 65.9
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 2.8e-141 506.1 386 67.6
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 6.2e-141 505.0 464 57.8
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 8.1e-141 504.6 468 60.0
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 1.1e-140 504.2 469 61.0
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.1e-140 504.2 471 59.7
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 1.4e-140 503.8 375 69.1
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 1.8e-140 503.4 369 70.2
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 3.1e-140 502.7 407 66.1
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 5.3e-140 501.9 360 68.9
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 6.9e-140 501.5 471 59.2
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 9.0e-140 501.1 470 57.2
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 1.2e-139 500.7 424 62.7
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.5e-139 500.4 471 59.2
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 3.4e-139 499.2 472 58.3
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 5.8e-139 498.4 468 59.2
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 7.6e-139 498.0 374 69.0
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 2.2e-138 496.5 368 69.3
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 2.9e-138 496.1 473 60.7
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 3.8e-138 495.7 465 58.5
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 4.9e-138 495.4 355 71.5
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 4.9e-138 495.4 396 66.2
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 3.2e-137 492.7 471 61.4
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 3.2e-137 492.7 506 56.9
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 5.4e-137 491.9 394 66.0
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 5.4e-137 491.9 464 59.1
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 7.1e-137 491.5 356 68.3
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 7.1e-137 491.5 464 61.0
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 1.2e-136 490.7 389 65.8
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 1.6e-136 490.3 482 58.5
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 1.6e-136 490.3 474 60.1
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 1.6e-136 490.3 391 64.5
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 3.5e-136 489.2 357 68.3
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 3.5e-136 489.2 483 57.8
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 6.0e-136 488.4 388 66.2
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 6.0e-136 488.4 363 69.1
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 7.9e-136 488.0 391 65.7
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 1.0e-135 487.6 402 63.2
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 2.3e-135 486.5 471 57.7
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 3.0e-135 486.1 402 62.7
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 3.9e-135 485.7 468 60.7
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 8.7e-135 484.6 471 58.0
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 1.1e-134 484.2 467 58.0
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 1.5e-134 483.8 404 63.1
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 2.5e-134 483.0 487 58.5
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 4.3e-134 482.3 410 63.7
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 7.4e-134 481.5 391 64.2
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 9.6e-134 481.1 427 61.6
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 1.3e-133 480.7 388 66.0
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 1.3e-133 480.7 363 66.9
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 2.1e-133 479.9 387 64.9
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 2.8e-133 479.6 391 63.9
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 3.6e-133 479.2 386 64.5
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 1.1e-132 477.6 458 59.0
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 1.8e-132 476.9 355 67.9
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 1.8e-132 476.9 410 63.2
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 1.8e-132 476.9 355 68.5
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 5.3e-132 475.3 409 63.6
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 1.2e-131 474.2 395 63.5
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 1.2e-131 474.2 429 59.4
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 1.2e-131 474.2 380 65.3
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 1.5e-131 473.8 353 68.6
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 2.0e-131 473.4 470 56.6
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 2.6e-131 473.0 439 59.7
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 9.9e-131 471.1 356 67.7
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 3.8e-130 469.2 340 70.0
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 3.8e-130 469.2 453 56.7
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 1.1e-129 467.6 367 66.2
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 1.9e-129 466.8 492 54.9
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 4.2e-129 465.7 383 63.4
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 1.6e-128 463.8 399 59.9
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 1.0e-127 461.1 411 59.4
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 5.1e-127 458.8 410 58.8
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 4.3e-126 455.7 384 61.7
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 7.4e-126 454.9 344 65.7
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 3.7e-125 452.6 390 60.5
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 6.2e-125 451.8 413 59.3
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 6.2e-125 451.8 368 62.5
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 1.1e-124 451.1 463 55.9
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 2.4e-124 449.9 368 62.2
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 4.0e-124 449.1 413 58.6
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 3.2e-121 439.5 343 64.7
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 3.2e-121 439.5 343 64.7
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 7.1e-121 438.3 333 67.9
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 5.3e-116 422.2 328 64.6
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 5.9e-115 418.7 332 63.9
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 1.3e-114 417.5 342 62.3
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 1.1e-113 414.5 336 62.5
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 9.3e-113 411.4 468 52.4
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 2.7e-112 409.8 362 61.0
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 4.3e-110 402.5 272 72.4
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 4.5e-107 392.5 306 66.3
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 4.5e-107 392.5 201 98.5
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 9.4e-105 384.8 378 54.5
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 2.8e-101 373.2 274 71.2
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 4.8e-101 372.5 348 60.6
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 3.1e-100 369.8 278 69.8
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 4.1e-100 369.4 345 54.8
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 2.3e-95 353.6 311 64.3
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 8.8e-95 351.7 400 49.8
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 1.0e-87 328.2 325 54.2
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.2e-83 314.7 249 63.9
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 8.5e-82 308.5 240 64.2
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 3.0e-79 300.1 322 52.2
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 3.7e-77 293.1 291 54.3
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 2.6e-70 270.4 278 50.4
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 4.4e-70 269.6 338 50.9
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 4.1e-68 263.1 283 50.2
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 1.2e-64 251.5 185 69.7
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 2.1e-64 250.8 344 43.6
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 9.8e-62 241.9 285 47.7
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 2.9e-61 240.4 273 49.8
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 7.8e-59 232.3 194 59.8
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 3.9e-50 203.4 233 48.5
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 2.2e-45 187.6 196 50.5
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.8e-40 170.6 127 71.7
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 1.1e-36 158.7 84 98.8
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 3.0e-34 150.6 296 36.1
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 2.9e-29 134.0 121 61.2
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 1.9e-25 121.3 83 69.9
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 7.3e-25 119.4 77 70.1
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 1.7e-21 108.2 71 77.5
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 2.9e-21 107.5 62 80.6
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 2.7e-19 100.9 71 73.2
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 2.4e-15 87.8 99 49.5
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.7e-13 81.6 57 73.7
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 4.8e-08 63.5 76 52.6


User provided reference genes

Program Settings