Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO302G0047 Papaver somniferum HOM05D003314 ORTHO05D004164 9.1e-93 343.6 176 100.0
Lj2A1086T64 Lonicera japonica HOM05D003314 ORTHO05D004164 2.1e-28 129.8 105 69.5
Dinv28665 Davidia involucrata HOM05D003314 ORTHO05D004164 3.5e-28 129.0 82 82.9
Lsat_1_v5_gn_9_19140 Lactuca sativa HOM05D003314 ORTHO05D004164 7.8e-28 127.9 105 67.6
THA.LOC104815810 Tarenaya hassleriana HOM05D003314 ORTHO05D004164 1.0e-27 127.5 87 78.2
HanXRQChr08g0229151 Helianthus annuus HOM05D003314 ORTHO05D004164 1.7e-27 126.7 105 67.6
HanXRQChr01g0011671 Helianthus annuus HOM05D003314 ORTHO05D004164 2.3e-27 126.3 105 66.7
Lsat_1_v5_gn_5_172641 Lactuca sativa HOM05D003314 ORTHO05D004164 2.3e-27 126.3 105 66.7
PSO017G4706 Papaver somniferum HOM05D003314 ORTHO05D004164 3.0e-27 125.9 87 79.3
PSO170G0130 Papaver somniferum HOM05D003314 ORTHO05D004164 3.0e-27 125.9 87 79.3
Aqoxy4G02458 Aquilegia oxysepala HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Ca_14964_v3 Cicer arietinum L. HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
COL.COLO4_11092 Corchorus olitorius HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Dinv09644 Davidia involucrata HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Gohir.A03G028500 Gossypium hirsutum HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Gohir.D03G140100 Gossypium hirsutum HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Gorai.003G146900 Gossypium raimondii HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Hma1.2p1_1981F.1_g309920 Hydrangea macrophylla HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Lalb_Chr15g0083041 Lupinus albus HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Medtr3g464770 Medicago truncatula HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Nn2g10926 Nelumbo nucifera HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Rhsim13G0067500 Rhododendron simsii HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
SGA_v2.0_scaffold146G36142 Striga asiatica HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Thecc.09G352300 Theobroma cacao HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
TPR.G32920 Trifolium pratense HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
TAR636G0028 Trochodendron aralioides HOM05D003314 ORTHO05D002223 6.6e-27 124.8 87 78.2
TAR636G3324 Trochodendron aralioides HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
vmacro02947 Vaccinium macrocarpon HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
GSVIVG01024699001 Vitis vinifera HOM05D003314 ORTHO05D004164 6.6e-27 124.8 87 78.2
Nitab4.5_0000839g0080 Nicotiana tabacum HOM05D003314 ORTHO05D004164 8.7e-27 124.4 87 77.0
Nitab4.5_0002352g0010 Nicotiana tabacum HOM05D003314 ORTHO05D004164 8.7e-27 124.4 87 77.0
Sopen06g033530 Solanum pennellii HOM05D003314 ORTHO05D004164 8.7e-27 124.4 87 77.0
PGSC0003DMG400030370 Solanum tuberosum HOM05D003314 ORTHO05D004164 8.7e-27 124.4 87 77.0
THA.LOC104800751 Tarenaya hassleriana HOM05D003314 ORTHO05D004164 8.7e-27 124.4 87 77.0
AL1G17230 Arabidopsis lyrata HOM05D003314 ORTHO05D004164 1.1e-26 124.0 87 75.9
AT1G07110 Arabidopsis thaliana HOM05D003314 ORTHO05D004164 1.1e-26 124.0 87 75.9
Carub.0001s0639 Capsella rubella HOM05D003314 ORTHO05D004164 1.1e-26 124.0 87 75.9
Atru.chr3.4168 Acer truncatum HOM05D003314 ORTHO05D004164 1.5e-26 123.6 87 77.0
CANSAT54G2389 Cannabis sativa HOM05D003314 ORTHO05D004164 1.5e-26 123.6 87 77.0
Ciclev10027872m.g Citrus clementina HOM05D003314 ORTHO05D004164 1.5e-26 123.6 87 77.0
Cc01_g14510 Coffea canephora HOM05D003314 ORTHO05D004164 1.5e-26 123.6 87 77.0
DCAR_007359 Daucus carota HOM05D003314 ORTHO05D004164 1.5e-26 123.6 107 65.4
Lj1A130T38 Lonicera japonica HOM05D003314 ORTHO05D004164 1.5e-26 123.6 87 74.7
Lj6g0001244 Lotus japonicus HOM05D003314 ORTHO05D004164 1.5e-26 123.6 87 77.0
LjContig00141g0002673 Lotus japonicus HOM05D003314 ORTHO05D004164 1.5e-26 123.6 84 79.8
Manes.18G141800 Manihot esculenta HOM05D003314 ORTHO05D004164 1.5e-26 123.6 87 77.0
QL01p039122 Quercus lobata HOM05D003314 ORTHO05D004164 1.5e-26 123.6 87 77.0
ATR0681G099 Amborella trichopoda HOM05D003314 ORTHO05D004164 1.9e-26 123.2 87 77.0
Thhalv10006901m.g Eutrema salsugineum HOM05D003314 ORTHO05D004164 1.9e-26 123.2 87 75.9
Peaxi162Scf00540g00022 Petunia axillaris HOM05D003314 ORTHO05D004164 1.9e-26 123.2 87 75.9
SalBow2G2371 Salvia bowleyana HOM05D003314 ORTHO05D004164 1.9e-26 123.2 87 77.0
Solyc06g082150.4 Solanum lycopersicum HOM05D003314 ORTHO05D004164 1.9e-26 123.2 87 75.9
CAN.G1095.9 Capsicum annuum HOM05D003314 ORTHO05D004164 2.5e-26 122.9 87 74.7
Nitab4.5_0000752g0070 Nicotiana tabacum HOM05D003314 ORTHO05D004164 2.5e-26 122.9 87 77.0
Sabra09G0055800 Salix brachista HOM05D003314 ORTHO05D004164 2.5e-26 122.9 84 78.6
Glyma.11G169700 Glycine max HOM05D003314 ORTHO05D004164 3.3e-26 122.5 87 77.0
Glyma.18G060600 Glycine max HOM05D003314 ORTHO05D004164 3.3e-26 122.5 87 77.0
Psat5g157680 Pisum sativum HOM05D003314 ORTHO05D004164 3.3e-26 122.5 87 77.0
Potri.009G073800 Populus trichocarpa HOM05D003314 ORTHO05D004164 3.3e-26 122.5 87 75.9
BcaB03g13407 Brassica carinata HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 74.7
A08p35790 Brassica napus HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 74.7
C08p02820 Brassica napus HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 74.7
BolC8t47077H Brassica oleracea HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 74.7
BraA08t35486Z Brassica rapa HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 74.7
CSS0022626 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 75.9
CSS0049027 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 75.9
CiPaw.13G074400 Carya illinoinensis HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 75.9
Ca_05629_v3 Cicer arietinum L. HOM05D003314 ORTHO05D004164 4.3e-26 122.1 84 77.4
Migut.N00780 Erythranthe guttata HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 75.9
Eucgr.J01899 Eucalyptus grandis HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 75.9
Glyma.02G228700 Glycine max HOM05D003314 ORTHO05D004164 4.3e-26 122.1 84 78.6
HPP92_013781 Vanilla planifolia HOM05D003314 ORTHO05D004164 4.3e-26 122.1 87 75.9
CSS0023090 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 5.6e-26 121.7 87 75.9
ECA247G1043 Erigeron canadensis HOM05D003314 ORTHO05D004164 5.6e-26 121.7 102 65.7
ECA248G0301 Erigeron canadensis HOM05D003314 ORTHO05D004164 5.6e-26 121.7 105 64.8
Psat2g055960 Pisum sativum HOM05D003314 ORTHO05D004164 5.6e-26 121.7 84 77.4
TPR.G5069 Trifolium pratense HOM05D003314 ORTHO05D004164 5.6e-26 121.7 84 77.4
CARHR006800 Cardamine hirsuta HOM05D003314 ORTHO05D004164 9.6e-26 120.9 87 74.7
Duzib150G1198 Durio zibethinus HOM05D003314 ORTHO05D004164 9.6e-26 120.9 87 77.0
Potri.001G279100 Populus trichocarpa HOM05D003314 ORTHO05D004164 9.6e-26 120.9 87 75.9
PGR119G0996 Punica granatum HOM05D003314 ORTHO05D004164 9.6e-26 120.9 87 75.9
Aa31LG1G6350 Aethionema arabicum HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 73.6
BcaC07g42027 Brassica carinata HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 74.7
A09p66600 Brassica napus HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 74.7
C08p50810 Brassica napus HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 74.7
BolC8t52609H Brassica oleracea HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 74.7
BraA09t42000Z Brassica rapa HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 74.7
MELO3C026830.2 Cucumis melo HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 75.9
Duzib168G0330 Durio zibethinus HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 74.7
Medtr5g071900 Medicago truncatula HOM05D003314 ORTHO05D004164 1.2e-25 120.6 84 76.2
RcHm_v2.0_Chr5g0070401 Rosa chinensis HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 75.9
TWI31G0289 Tripterygium wilfordii HOM05D003314 ORTHO05D004164 1.2e-25 120.6 85 76.5
unitig_60.g25552 Utricularia gibba HOM05D003314 ORTHO05D004164 1.2e-25 120.6 87 71.3
Haze_24369 Corylus avellana HOM05D003314 ORTHO05D004164 1.6e-25 120.2 87 75.9
MD11G1068700 Malus domestica HOM05D003314 ORTHO05D004164 1.6e-25 120.2 87 74.7
Phvul.006G069900 Phaseolus vulgaris HOM05D003314 ORTHO05D004164 1.6e-25 120.2 87 75.9
Glyma.14G195700 Glycine max HOM05D003314 ORTHO05D004164 2.1e-25 119.8 84 77.4
TWI79G1066 Tripterygium wilfordii HOM05D003314 ORTHO05D004164 2.1e-25 119.8 87 77.0
TAR623G0703 Trochodendron aralioides HOM05D003314 ORTHO05D004164 2.1e-25 119.8 87 75.9
VMungo0540G1658 Vigna mungo HOM05D003314 ORTHO05D004164 2.1e-25 119.8 87 74.7
arahy.Tifrunner.gnm1.ann1.UVU1B7 Arachis hypogaea HOM05D003314 ORTHO05D004164 2.8e-25 119.4 84 75.0
CsaV3_6G016080 Cucumis sativus L. HOM05D003314 ORTHO05D004164 2.8e-25 119.4 87 74.7
FvH4_3g39080 Fragaria vesca HOM05D003314 ORTHO05D004164 2.8e-25 119.4 87 74.7
FAN21G3397 Fragaria x ananassa HOM05D003314 ORTHO05D004164 2.8e-25 119.4 87 74.7
FAN25G2774 Fragaria x ananassa HOM05D003314 ORTHO05D004164 2.8e-25 119.4 87 74.7
Phvul.008G259400 Phaseolus vulgaris HOM05D003314 ORTHO05D004164 2.8e-25 119.4 84 77.4
arahy.Tifrunner.gnm1.ann1.H173G9 Arachis hypogaea HOM05D003314 ORTHO05D004164 3.6e-25 119.0 88 76.1
arahy.Tifrunner.gnm1.ann1.Y0JIV8 Arachis hypogaea HOM05D003314 ORTHO05D004164 3.6e-25 119.0 84 75.0
arahy.Tifrunner.gnm1.ann1.99UL3I Arachis hypogaea HOM05D003314 ORTHO05D004164 4.7e-25 118.6 92 73.9
CiPaw.14G057100 Carya illinoinensis HOM05D003314 ORTHO05D004164 4.7e-25 118.6 87 73.6
CDE06G0062 Ceratophyllum demersum HOM05D003314 ORTHO05D004164 4.7e-25 118.6 87 72.4
MBI15_g29380_MAGBIO Magnolia biondii HOM05D003314 ORTHO05D004164 4.7e-25 118.6 92 73.9
Os05g0164100 Oryza sativa ssp. japonica HOM05D003314 ORTHO05D004164 4.7e-25 118.6 87 74.7
Zm00001eb282250 Zea mays HOM05D003314 ORTHO05D004164 4.7e-25 118.6 87 74.7
Ah.01g002410 Amaranthus hybridus HOM05D003314 ORTHO05D004164 6.2e-25 118.2 87 72.4
AUR62041217 Chenopodium quinoa HOM05D003314 ORTHO05D004164 6.2e-25 118.2 87 73.6
Lalb_Chr17g0345221 Lupinus albus HOM05D003314 ORTHO05D004164 6.2e-25 118.2 84 76.2
AUR62025049 Chenopodium quinoa HOM05D003314 ORTHO05D004164 8.1e-25 117.9 86 74.4
Prupe.6G053800 Prunus persica HOM05D003314 ORTHO05D004164 8.1e-25 117.9 87 74.7
CDE12G0377 Ceratophyllum demersum HOM05D003314 ORTHO05D004164 1.4e-24 117.1 87 71.3
Zm00001eb013550 Zea mays HOM05D003314 ORTHO05D004164 1.4e-24 117.1 87 72.4
MSTRG.17878 Avicennia marina HOM05D003314 ORTHO05D004164 1.8e-24 116.7 87 73.6
Cfa011730 Carpinus fangiana HOM05D003314 ORTHO05D004164 1.8e-24 116.7 87 73.6
Oeu051518.1 Olea europaea HOM05D003314 ORTHO05D004164 1.8e-24 116.7 87 71.3
A10p05630 Brassica napus HOM05D003314 ORTHO05D004164 3.1e-24 115.9 87 71.3
C05p05170 Brassica napus HOM05D003314 ORTHO05D004164 3.1e-24 115.9 87 71.3
BolC5t29289H Brassica oleracea HOM05D003314 ORTHO05D004164 3.1e-24 115.9 87 71.3
EL10Ac9g22391 Beta vulgaris HOM05D003314 ORTHO05D004164 4.0e-24 115.5 87 72.4
Os03g0294200 Oryza sativa ssp. japonica HOM05D003314 ORTHO05D004164 4.0e-24 115.5 87 72.4
MSTRG.12679 Avicennia marina HOM05D003314 ORTHO05D004164 5.2e-24 115.2 87 71.3
Sed0000995 Sechium edule HOM05D003314 ORTHO05D004164 5.2e-24 115.2 87 72.4
Mapoly0056s0097 Marchantia polymorpha HOM05D003314 ORTHO05D004164 2.6e-23 112.8 87 71.3
AagrBONN_evm.TU.Sc2ySwM_117.3149 Anthoceros agrestis HOM05D003314 ORTHO05D004164 4.4e-23 112.1 89 66.3
Pp3c21_10950 Physcomitrium patens HOM05D003314 ORTHO05D004164 7.6e-23 111.3 84 69.0
SMO174G0065 Selaginella moellendorffii HOM05D003314 ORTHO05D004164 7.6e-23 111.3 84 67.9
SGA_v2.0_scaffold120G32908 Striga asiatica HOM05D003314 ORTHO05D004164 1.3e-22 110.5 113 60.2
Pp3c16_2340 Physcomitrium patens HOM05D003314 ORTHO05D004164 1.7e-22 110.2 87 67.8
Pp3c19_20300 Physcomitrium patens HOM05D003314 ORTHO05D004164 1.7e-22 110.2 84 67.9
MD03G1064800 Malus domestica HOM05D003314 ORTHO05D004164 2.2e-22 109.8 87 71.3
SMO244G0010 Selaginella moellendorffii HOM05D003314 ORTHO05D004164 2.2e-22 109.8 87 67.8
Pp3c25_1530 Physcomitrium patens HOM05D003314 ORTHO05D004164 1.4e-21 107.1 102 57.8
PRCOL_00004422 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 9.3e-21 104.4 84 60.7
Cre16.g691888 Chlamydomonas reinhardtii HOM05D003314 ORTHO05D004164 8.1e-17 91.3 107 48.6
Cre16.g652150 Chlamydomonas reinhardtii HOM05D003314 ORTHO05D004164 2.0e-15 86.7 76 57.9
Haze_27150 Corylus avellana HOM05D003314 ORTHO05D004164 3.2e-13 79.3 77 50.6
Cpa.g.sc2.426 Carica papaya HOM05D003314 ORTHO05D004164 7.1e-13 78.2 61 72.1
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 4.6e-12 75.5 84 46.4
Cfa025454 Carpinus fangiana HOM05D003314 ORTHO05D004164 1.3e-11 73.9 83 42.2
MCO01G554 Micromonas commoda HOM05D003314 ORTHO05D004164 1.8e-11 73.6 80 52.5
Sp1g05820 Schrenkiella parvula HOM05D003314 ORTHO05D004164 6.7e-11 71.6 57 71.9
Actinidia32630 Actinidia chinensis HOM05D003314 ORTHO05D004164 1.5e-10 70.5 101 48.5
ClCG02G019450 Citrullus lanatus HOM05D003314 ORTHO05D004164 3.3e-10 69.3 87 52.9
Cfa026335 Carpinus fangiana HOM05D003314 ORTHO05D004164 4.3e-10 68.9 65 53.8
BcaC05g24676 Brassica carinata HOM05D003314 ORTHO05D004164 2.1e-09 66.6 66 60.6
BraA10t42824Z Brassica rapa HOM05D003314 ORTHO05D004164 8.1e-09 64.7 77 51.9
SEGI_19911 Sequoiadendron giganteum HOM05D003314 ORTHO05D004164 8.1e-09 64.7 55 67.3
MCO04G290 Micromonas commoda HOM05D003314 ORTHO05D004164 5.3e-08 62.0 73 45.2
SEGI_28657 Sequoiadendron giganteum HOM05D003314 ORTHO05D004164 5.3e-08 62.0 55 63.6
SEGI_07736 Sequoiadendron giganteum HOM05D003314 ORTHO05D035932 9.9e-07 57.8 32 84.4
Glyma.06G028800 Glycine max HOM05D003314 ORTHO05D035932 3.8e-06 55.8 32 81.2
Glyma.17G189950 Glycine max HOM05D003314 ORTHO05D035932 3.8e-06 55.8 32 81.2


User provided reference genes

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