Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 9.2e-145 516.9 271 100.0
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 4.5e-83 312.0 190 81.1
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 7.7e-83 311.2 204 77.0
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 1.3e-82 310.5 206 74.8
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 2.2e-82 309.7 180 85.0
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 2.2e-82 309.7 278 61.9
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 2.9e-82 309.3 190 80.0
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 6.5e-82 308.1 239 68.6
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.1e-81 307.4 275 62.5
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.4e-81 307.0 182 82.4
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.9e-81 306.6 198 78.8
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 3.2e-81 305.8 221 71.9
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 4.2e-81 305.4 197 77.7
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 5.5e-81 305.1 180 83.3
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 9.4e-81 304.3 213 72.8
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.2e-80 303.9 199 77.9
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 2.7e-80 302.8 259 63.3
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 3.6e-80 302.4 199 78.4
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 3.6e-80 302.4 237 67.1
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 8.0e-80 301.2 208 72.6
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 1.4e-79 300.4 181 80.1
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 1.8e-79 300.1 275 60.4
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 3.0e-79 299.3 226 68.6
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 3.0e-79 299.3 198 77.8
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 5.2e-79 298.5 239 66.1
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 5.2e-79 298.5 188 78.7
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 6.7e-79 298.1 259 62.2
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 8.8e-79 297.7 273 62.3
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.0e-78 296.6 225 67.6
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 2.6e-78 296.2 195 77.4
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 2.6e-78 296.2 195 77.4
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 5.7e-78 295.0 225 70.2
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 9.7e-78 294.3 224 68.3
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.3e-77 293.9 243 64.2
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.3e-77 293.9 288 58.3
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 4.8e-77 292.0 192 77.6
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 4.8e-77 292.0 265 63.8
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 8.2e-77 291.2 224 68.3
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.1e-76 290.8 229 65.9
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 2.4e-76 289.7 197 74.1
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 2.4e-76 289.7 194 74.7
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 2.4e-76 289.7 237 65.4
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 3.1e-76 289.3 244 61.5
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.6e-75 287.0 225 67.1
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 3.5e-75 285.8 219 67.1
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 5.9e-75 285.0 182 76.9
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 5.9e-75 285.0 180 78.3
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 7.7e-75 284.6 216 68.5
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 1.0e-74 284.3 219 65.3
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 2.2e-74 283.1 275 57.8
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 3.8e-74 282.3 204 69.6
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 5.0e-74 282.0 265 59.2
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 8.5e-74 281.2 222 65.3
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 8.5e-74 281.2 230 64.8
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 1.1e-73 280.8 214 66.4
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.1e-73 280.8 192 73.4
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.5e-73 280.4 215 67.4
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 4.2e-73 278.9 198 71.7
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 4.2e-73 278.9 197 70.1
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.2e-72 277.3 214 65.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 3.6e-72 275.8 200 72.0
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 4.7e-72 275.4 186 73.1
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 6.1e-72 275.0 179 76.5
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 8.0e-72 274.6 231 63.6
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 1.0e-71 274.2 198 68.2
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 1.8e-71 273.5 183 73.8
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 2.3e-71 273.1 271 57.2
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.2e-70 270.8 179 73.2
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.2e-70 270.8 179 73.2
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 2.6e-70 269.6 213 65.3
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 3.3e-70 269.2 242 58.7
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 4.4e-70 268.9 242 61.6
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 3.7e-69 265.8 187 71.7
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 7.0e-68 261.5 196 66.8
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.2e-67 260.8 222 63.1
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.7e-67 259.6 212 61.8
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 2.2e-66 256.5 198 67.2
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 1.5e-65 253.8 155 78.7
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.0e-63 247.7 270 51.5
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.0e-63 247.7 201 65.2
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.0e-62 243.4 143 79.7
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 2.6e-62 243.0 236 58.9
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 5.7e-62 241.9 214 61.7
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 2.2e-61 240.0 211 63.0
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 2.4e-60 236.5 223 57.4
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 1.0e-58 231.1 180 63.9
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 8.6e-58 228.0 226 56.6
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 1.9e-57 226.9 151 73.5
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 5.2e-55 218.8 157 70.7
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.3e-50 204.1 118 81.4
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 2.9e-50 203.0 125 80.8
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 5.6e-49 198.7 168 61.3
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 2.6e-46 189.9 181 57.5
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 4.9e-45 185.7 162 63.0
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 5.6e-41 172.2 142 60.6
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 3.9e-34 149.4 95 73.7
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.7e-29 134.0 75 84.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 1.2e-27 127.9 131 54.2
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.5e-25 120.9 65 86.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 3.6e-16 89.7 56 75.0
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 3.5e-11 73.2 67 58.2


User provided reference genes

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