Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 6.5e-200 700.7 392 100.0
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 8.5e-192 673.7 392 95.7
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 1.7e-179 632.9 394 91.1
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 9.3e-106 387.9 402 58.7
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 2.8e-102 376.3 390 57.4
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 3.7e-102 375.9 397 55.2
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.5e-100 370.5 393 55.5
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 1.5e-100 370.5 390 56.4
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.6e-100 369.8 391 55.0
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 3.8e-99 365.9 390 55.9
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 3.8e-99 365.9 391 54.5
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 6.5e-99 365.2 392 54.8
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 8.5e-99 364.8 394 54.8
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 8.5e-99 364.8 390 55.6
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 8.5e-99 364.8 390 55.6
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 8.5e-99 364.8 378 55.8
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 8.5e-99 364.8 393 54.2
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 1.1e-98 364.4 414 52.9
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 1.9e-98 363.6 397 55.9
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 5.5e-98 362.1 391 55.5
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 9.4e-98 361.3 392 55.1
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 9.4e-98 361.3 392 55.1
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 1.2e-97 360.9 390 54.9
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.1e-97 360.1 391 55.5
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 2.7e-97 359.8 395 57.2
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 1.0e-96 357.8 393 54.7
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 1.4e-96 357.5 393 53.7
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 3.0e-96 356.3 395 53.2
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 5.1e-96 355.5 392 54.6
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 1.1e-95 354.4 429 50.3
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 1.1e-95 354.4 390 52.6
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 2.0e-95 353.6 393 53.4
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.0e-95 353.6 395 54.4
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 2.6e-95 353.2 396 52.8
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 7.4e-95 351.7 389 53.7
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 7.4e-95 351.7 391 54.5
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 1.7e-94 350.5 393 52.9
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 1.7e-94 350.5 416 52.9
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 2.2e-94 350.1 390 53.8
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 3.7e-94 349.4 389 54.2
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 3.7e-94 349.4 393 52.9
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 3.7e-94 349.4 390 56.4
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 6.3e-94 348.6 391 53.2
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 1.1e-93 347.8 392 52.6
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 1.1e-93 347.8 393 52.7
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 1.1e-93 347.8 415 50.8
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 2.4e-93 346.7 395 52.2
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 3.1e-93 346.3 390 56.9
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 5.3e-93 345.5 391 53.5
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 1.2e-92 344.4 391 52.7
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 1.2e-92 344.4 408 54.2
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 1.5e-92 344.0 391 52.4
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 2.0e-92 343.6 396 53.3
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 2.6e-92 343.2 390 52.3
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 4.5e-92 342.4 390 52.3
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 4.5e-92 342.4 388 53.4
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 7.7e-92 341.7 401 52.6
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 7.7e-92 341.7 391 53.5
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 7.7e-92 341.7 393 51.7
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 1.3e-91 340.9 392 54.3
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 1.4e-90 337.4 389 54.2
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 2.5e-90 336.7 420 50.7
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 2.5e-90 336.7 391 52.2
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 5.5e-90 335.5 389 51.4
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 5.5e-90 335.5 391 53.2
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 7.2e-90 335.1 393 56.7
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 1.6e-89 334.0 394 56.6
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 2.1e-89 333.6 392 50.3
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 2.1e-89 333.6 391 56.0
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 2.7e-89 333.2 390 55.4
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 3.6e-89 332.8 391 51.7
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 4.7e-89 332.4 401 56.1
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 6.1e-89 332.0 392 50.8
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 7.9e-89 331.6 394 51.8
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 2.0e-87 327.0 405 55.6
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 2.0e-87 327.0 401 52.4
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 7.4e-87 325.1 387 50.9
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 9.7e-87 324.7 401 55.6
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 1.3e-86 324.3 391 50.4
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 1.3e-86 324.3 390 51.3
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 2.8e-86 323.2 393 50.6
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 4.8e-86 322.4 414 53.6
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 4.8e-86 322.4 406 55.2
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 6.3e-86 322.0 408 54.7
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 6.3e-86 322.0 392 52.3
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 7.0e-85 318.5 396 53.3
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 9.1e-85 318.2 391 49.9
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 2.0e-84 317.0 410 52.9
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 3.5e-84 316.2 416 52.2
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 5.9e-84 315.5 393 49.4
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 5.9e-84 315.5 395 50.9
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 1.3e-83 314.3 374 51.3
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 3.8e-83 312.8 399 48.9
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 6.5e-83 312.0 412 53.9
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.5e-82 310.8 420 47.4
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 3.2e-82 309.7 415 53.5
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 4.2e-82 309.3 411 53.8
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 1.2e-81 307.8 410 53.7
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 1.8e-80 303.9 420 48.8
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 2.3e-80 303.5 387 48.8
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 4.0e-80 302.8 414 52.2
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 1.5e-79 300.8 389 48.8
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 1.3e-78 297.7 415 51.6
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 3.7e-78 296.2 421 51.5
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 1.1e-77 294.7 376 52.1
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 1.8e-77 293.9 389 49.1
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 4.1e-77 292.7 436 43.1
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 5.9e-76 288.9 391 49.4
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 7.2e-74 282.0 391 46.8
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 8.0e-73 278.5 343 49.6
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 4.5e-68 262.7 348 49.1
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 1.8e-56 224.2 279 50.5
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 3.3e-50 203.4 482 34.2
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 6.2e-49 199.1 410 38.3
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 4.4e-47 193.0 387 37.2
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.1e-41 174.1 148 64.2
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 1.5e-39 167.9 282 45.7
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 2.4e-37 160.6 297 39.1
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 9.2e-37 158.7 216 46.3
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 9.2e-37 158.7 216 46.3
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 9.2e-37 158.7 216 46.3
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 2.3e-35 154.1 537 28.5
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 5.6e-34 149.4 154 55.8
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 1.2e-31 141.7 149 57.0
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 2.0e-31 141.0 407 31.4
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 6.6e-27 125.9 389 32.6
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 4.7e-25 119.8 185 43.8
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 3.1e-24 117.1 312 34.3
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 5.8e-23 112.8 201 48.8
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 3.3e-18 97.1 382 29.1
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 3.3e-18 97.1 382 29.1
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.2e-15 88.6 177 37.9
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 2.3e-11 74.3 45 75.6
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 4.0e-08 63.5 100 41.0
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 1.3e-06 58.5 78 41.0


User provided reference genes

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