Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 2.4e-124 448.7 215 100.0
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 1.3e-120 436.4 215 98.1
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.0e-93 347.1 205 79.0
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 5.0e-93 344.7 197 81.7
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 2.0e-89 332.8 198 78.3
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.0e-89 332.8 200 79.0
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 1.3e-88 330.1 177 87.6
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 4.8e-88 328.2 200 79.5
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 3.1e-87 325.5 177 81.9
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 7.0e-87 324.3 190 82.1
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 1.2e-86 323.6 190 81.6
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 1.6e-86 323.2 200 78.0
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 2.0e-86 322.8 200 78.0
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 2.6e-86 322.4 200 77.5
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 4.5e-86 321.6 200 78.0
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.0e-85 320.5 190 78.4
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.3e-85 320.1 171 86.0
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 1.3e-85 320.1 176 84.1
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.7e-85 319.7 168 87.5
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 2.2e-85 319.3 177 84.2
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 3.8e-85 318.5 170 86.5
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 5.0e-85 318.2 170 85.9
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 8.5e-85 317.4 183 82.5
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 1.1e-84 317.0 167 86.8
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 1.1e-84 317.0 168 86.9
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.5e-84 316.6 174 82.8
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 1.9e-84 316.2 159 90.6
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 1.9e-84 316.2 159 90.6
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 2.5e-84 315.8 189 77.8
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 2.5e-84 315.8 187 80.7
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 3.2e-84 315.5 162 89.5
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 7.2e-84 314.3 182 81.9
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 9.4e-84 313.9 217 71.4
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 9.4e-84 313.9 169 84.0
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 9.4e-84 313.9 169 84.0
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 9.4e-84 313.9 171 84.2
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 9.4e-84 313.9 172 83.7
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 1.2e-83 313.5 178 79.8
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 1.6e-83 313.2 165 87.9
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 3.6e-83 312.0 174 84.5
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 3.6e-83 312.0 235 65.1
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 4.7e-83 311.6 174 82.8
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 4.7e-83 311.6 159 87.4
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 4.7e-83 311.6 159 87.4
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 4.7e-83 311.6 159 87.4
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 4.7e-83 311.6 165 85.5
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 6.1e-83 311.2 164 86.6
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 8.0e-83 310.8 167 84.4
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 8.0e-83 310.8 168 85.7
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 8.0e-83 310.8 157 88.5
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 8.0e-83 310.8 164 87.2
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 1.0e-82 310.5 191 76.4
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 1.0e-82 310.5 168 85.1
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 1.0e-82 310.5 168 85.1
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 2.3e-82 309.3 176 80.7
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 2.3e-82 309.3 178 82.6
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 3.0e-82 308.9 159 89.3
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 3.0e-82 308.9 165 83.6
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 4.0e-82 308.5 184 79.3
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 1.1e-81 307.0 171 83.0
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 3.3e-81 305.4 165 82.4
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 3.3e-81 305.4 202 73.8
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 5.7e-81 304.7 159 89.9
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 7.5e-81 304.3 171 81.3
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 6.3e-80 301.2 169 79.3
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 1.4e-79 300.1 182 76.4
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 2.4e-79 299.3 177 80.2
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.4e-79 299.3 182 76.9
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 9.1e-79 297.4 168 81.0
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 2.0e-78 296.2 184 76.1
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 3.5e-78 295.4 188 75.0
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 5.9e-78 294.7 185 74.1
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 1.0e-77 293.9 168 78.6
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 1.7e-77 293.1 167 79.6
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 2.2e-77 292.7 166 80.1
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 2.2e-77 292.7 166 80.1
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 2.2e-77 292.7 166 80.1
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 2.9e-77 292.4 166 79.5
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 2.9e-77 292.4 166 79.5
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 2.9e-77 292.4 166 79.5
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 8.5e-77 290.8 167 79.0
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 8.5e-77 290.8 186 72.6
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 1.1e-76 290.4 178 78.7
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 1.1e-76 290.4 160 80.6
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 1.9e-76 289.7 176 77.3
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 1.9e-76 289.7 166 77.7
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 4.2e-76 288.5 166 78.9
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 5.5e-76 288.1 167 77.8
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 6.1e-75 284.6 153 85.6
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 1.8e-74 283.1 154 85.7
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 1.2e-73 280.4 144 86.8
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 2.8e-72 275.8 199 68.3
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 1.3e-69 266.9 206 62.1
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 3.2e-68 262.3 174 71.8
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 3.2e-68 262.3 154 79.9
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.7e-64 250.0 156 74.4
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 6.6e-61 238.0 125 86.4
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 9.5e-60 234.2 145 73.1
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 2.0e-57 226.5 155 64.5
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 2.4e-55 219.5 131 79.4
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.6e-54 216.9 159 66.0
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 4.3e-52 208.8 112 86.6
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 2.1e-51 206.5 119 74.8
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 9.5e-44 181.0 130 64.6
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 8.9e-42 174.5 178 53.9
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 1.5e-33 147.1 176 43.2
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 2.1e-30 136.7 85 70.6
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 6.9e-26 121.7 159 45.3
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.6e-14 84.0 46 82.6
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 2.1e-14 83.6 42 88.1
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 4.2e-07 59.3 40 60.0


User provided reference genes

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