Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 4.4e-30 134.4 93 100.0
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 4.4e-30 134.4 93 100.0
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 4.9e-29 131.0 93 97.8
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 6.2e-24 114.0 94 89.4
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 1.9e-20 102.4 89 82.0
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 1.9e-20 102.4 89 82.0
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 1.9e-20 102.4 89 83.1
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.9e-20 102.4 89 60.7
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 2.4e-15 85.5 86 54.7
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 5.2e-15 84.3 86 65.1
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 5.2e-15 84.3 86 65.1
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 6.8e-15 84.0 85 50.6
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 5.8e-14 80.9 84 64.3
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 9.9e-14 80.1 86 50.0
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.3e-13 79.7 84 52.4
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.7e-13 79.3 86 51.2
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 2.2e-13 79.0 86 51.2
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 2.9e-13 78.6 87 67.8
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.8e-13 78.2 89 61.8
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.1e-12 76.6 86 55.8
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.9e-12 75.9 84 50.0
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.9e-12 75.9 89 59.6
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 3.2e-12 75.1 88 50.0
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 3.2e-12 75.1 88 50.0
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 3.2e-12 75.1 88 50.0
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 3.2e-12 75.1 88 50.0
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 3.2e-12 75.1 88 50.0
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 3.2e-12 75.1 88 50.0
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 3.2e-12 75.1 88 50.0
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 3.2e-12 75.1 88 50.0
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 3.2e-12 75.1 87 43.7
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 5.4e-12 74.3 83 49.4
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 7.1e-12 73.9 86 46.5
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 7.1e-12 73.9 85 47.1
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 7.1e-12 73.9 85 44.7
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 7.1e-12 73.9 85 44.7
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 7.1e-12 73.9 89 65.2
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 9.3e-12 73.6 83 48.2
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 9.3e-12 73.6 83 45.8
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.2e-11 73.2 86 46.5
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.1e-11 72.4 90 45.6
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 2.1e-11 72.4 86 62.8
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 2.1e-11 72.4 86 62.8
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 2.1e-11 72.4 84 46.4
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.7e-11 72.0 84 46.4
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 2.7e-11 72.0 85 43.5
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 3.5e-11 71.6 84 46.4
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 4.6e-11 71.2 84 47.6
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 6.0e-11 70.9 85 42.4
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 7.8e-11 70.5 82 50.0
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.0e-10 70.1 84 46.4
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 1.3e-10 69.7 88 48.9
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.7e-10 69.3 83 42.2
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 6.6e-10 67.4 83 63.9
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 1.5e-09 66.2 86 43.0
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 1.5e-09 66.2 87 62.1
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 1.9e-09 65.9 83 62.7
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 3.3e-09 65.1 85 67.1
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 4.3e-09 64.7 82 47.6
Aqoxy5G00093 Aquilegia oxysepala HOM05D005842 ORTHO05D007077 7.3e-09 63.9 93 53.8
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 7.3e-09 63.9 86 46.5
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 7.3e-09 63.9 83 60.2
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 1.3e-08 63.2 89 39.3
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.1e-08 62.4 86 45.3
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 2.1e-08 62.4 83 43.4
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 2.8e-08 62.0 86 44.2
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 2.8e-08 62.0 86 44.2
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 2.8e-08 62.0 70 44.3
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 2.8e-08 62.0 80 45.0
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 6.2e-08 60.8 82 65.9
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 6.2e-08 60.8 82 65.9
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 6.2e-08 60.8 82 65.9
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 6.2e-08 60.8 82 65.9
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 8.1e-08 60.5 89 41.6
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 8.1e-08 60.5 96 40.6
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 8.1e-08 60.5 63 50.8
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 8.1e-08 60.5 106 47.2
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 8.1e-08 60.5 90 41.1
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.1e-07 60.1 80 43.8
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.8e-07 59.3 80 42.5
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 3.1e-07 58.5 87 66.7
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 4.0e-07 58.2 100 57.0
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 9.0e-07 57.0 70 51.4
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.2e-06 56.6 34 73.5
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 1.2e-06 56.6 106 54.7
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 1.2e-06 56.6 70 38.6
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 1.2e-06 56.6 82 39.0
TWI53G0373 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 2.0e-06 55.8 35 71.4
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 2.6e-06 55.5 39 69.2
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 2.6e-06 55.5 36 66.7
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 7.6e-06 53.9 70 55.7
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 9.9e-06 53.5 82 62.2


User provided reference genes

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