Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 0.0e+00 1211.8 645 100.0
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 0.0e+00 1179.1 646 93.2
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 2.1e-240 835.9 647 68.0
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 3.6e-240 835.1 662 67.1
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 2.2e-237 825.9 649 67.3
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 8.7e-234 813.9 649 67.0
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 2.0e-230 802.7 637 67.3
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 1.3e-226 790.0 645 66.7
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 2.5e-225 785.8 645 64.7
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 4.3e-225 785.0 645 66.8
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 9.6e-225 783.9 653 63.6
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 1.1e-223 780.4 649 63.6
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 1.1e-223 780.4 666 62.3
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.8e-223 779.6 649 64.4
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 3.1e-223 778.9 648 64.0
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 3.1e-223 778.9 646 65.6
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.2e-222 776.9 651 63.9
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 4.5e-222 775.0 645 64.2
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 7.6e-222 774.2 647 64.3
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 1.3e-221 773.5 646 63.3
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 6.5e-221 771.2 646 68.6
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 9.3e-220 767.3 649 63.6
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 9.3e-220 767.3 658 62.2
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 2.7e-219 765.8 647 62.9
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 7.9e-219 764.2 646 63.0
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 1.0e-218 763.8 647 66.9
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 1.3e-218 763.5 652 62.4
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 1.8e-218 763.1 645 62.8
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 3.0e-218 762.3 660 61.8
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 3.9e-218 761.9 645 62.3
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 2.5e-217 759.2 646 63.2
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 2.5e-217 759.2 646 65.5
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 4.3e-217 758.4 646 63.0
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 5.7e-217 758.1 645 62.8
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 5.7e-217 758.1 647 62.4
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 4.8e-216 755.0 657 61.9
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.4e-215 753.4 646 62.5
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 3.1e-215 752.3 645 62.5
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.0e-213 747.3 646 62.7
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.7e-213 746.5 645 64.3
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 3.8e-213 745.3 489 76.3
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 1.9e-212 743.0 645 61.7
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 1.2e-211 740.3 645 61.4
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 3.6e-211 738.8 641 62.6
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 1.0e-210 737.3 652 60.1
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 1.8e-210 736.5 645 61.4
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 5.1e-210 734.9 645 60.6
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 5.1e-210 734.9 645 60.6
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 2.5e-209 732.6 660 58.9
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 3.3e-209 732.3 647 60.4
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 7.4e-209 731.1 649 64.7
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 9.7e-209 730.7 645 59.7
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 1.6e-208 729.9 641 61.6
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 2.4e-207 726.1 649 60.6
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 4.1e-207 725.3 656 59.5
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 6.9e-207 724.5 648 61.4
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 9.1e-207 724.2 645 60.5
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 2.0e-206 723.0 647 60.4
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 7.7e-206 721.1 647 60.4
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.3e-205 720.3 647 60.6
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.8e-205 718.8 651 60.2
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 3.2e-204 715.7 650 59.2
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 9.4e-204 714.1 647 60.7
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 9.4e-204 714.1 651 58.8
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 1.2e-203 713.8 648 61.6
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 2.1e-203 713.0 652 60.1
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 3.6e-203 712.2 510 71.6
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 6.1e-203 711.4 646 60.8
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 7.9e-203 711.1 646 58.8
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 6.7e-202 708.0 524 68.1
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 8.8e-202 707.6 665 58.2
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 2.6e-201 706.1 649 58.6
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 5.7e-201 704.9 648 59.0
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 7.4e-201 704.5 646 59.9
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 4.8e-200 701.8 647 60.6
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 4.8e-200 701.8 793 52.8
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 6.3e-200 701.4 661 59.5
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 2.4e-199 699.5 647 57.0
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 4.1e-199 698.7 532 67.7
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 6.9e-199 698.0 661 61.7
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 1.3e-197 693.7 543 65.4
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 1.7e-197 693.3 646 59.0
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.9e-197 692.6 646 58.8
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 2.9e-197 692.6 544 65.8
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 3.8e-197 692.2 646 58.8
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 8.5e-197 691.0 648 56.8
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 2.5e-196 689.5 646 57.1
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 2.5e-196 689.5 646 57.1
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 3.2e-196 689.1 581 62.5
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 4.2e-196 688.7 659 56.9
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 5.5e-196 688.3 648 56.6
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 1.2e-195 687.2 656 57.0
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 1.6e-195 686.8 674 55.9
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 3.6e-195 685.6 652 57.5
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.0e-194 684.1 648 60.2
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 1.8e-194 683.3 662 55.4
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 2.0e-193 679.9 657 56.8
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 2.6e-193 679.5 650 57.5
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 5.7e-193 678.3 656 57.5
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 2.8e-192 676.0 660 56.5
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 4.8e-192 675.2 658 56.4
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 9.1e-191 671.0 646 59.6
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 1.9e-188 663.3 653 56.8
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 1.0e-186 657.5 645 55.5
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 2.0e-182 643.3 653 53.9
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 7.7e-182 641.3 460 70.7
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 5.0e-181 638.6 661 54.6
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 1.9e-180 636.7 645 55.7
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 3.4e-177 625.9 652 53.4
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 7.0e-175 618.2 464 69.0
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 9.5e-172 607.8 435 70.3
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 3.4e-169 599.4 568 57.4
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 3.7e-168 595.9 695 50.5
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 5.4e-167 592.0 488 61.7
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.0e-165 587.8 399 71.9
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 4.7e-163 578.9 661 52.8
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 1.1e-159 567.8 665 48.7
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 5.4e-159 565.5 457 62.6
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 1.3e-157 560.8 654 48.9
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 3.9e-157 559.3 654 50.0
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 5.2e-154 548.9 652 48.2
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 2.6e-153 546.6 673 46.1
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 7.5e-153 545.0 364 72.3
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 4.9e-152 542.3 649 49.6
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 8.6e-149 531.6 678 44.7
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 1.7e-144 517.3 317 78.5
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 5.8e-137 492.3 302 77.5
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 5.4e-135 485.7 315 75.6
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 3.2e-127 459.9 315 71.4
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 2.5e-124 450.3 557 45.6
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 1.7e-120 437.6 302 69.9
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 8.7e-109 398.7 310 69.7
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 4.3e-100 369.8 259 69.1
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 4.3e-100 369.8 259 69.1
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 5.0e-64 250.0 265 55.1
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 2.3e-56 224.6 345 38.3
VMungo0464G1352 Vigna mungo HOM05D004716 ORTHO05D005646 4.0e-37 160.6 165 54.5
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 2.1e-30 138.3 320 31.9
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 4.7e-30 137.1 177 47.5
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 6.4e-27 126.7 191 45.0
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 4.1e-26 124.0 306 34.6
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.2e-25 122.5 87 69.0
ATR0772G018 Amborella trichopoda HOM05D004716 ORTHO05D005646 1.2e-25 122.5 196 42.3
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 1.2e-25 122.5 92 72.8
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 2.4e-18 98.2 185 37.8
SEGI_31186 Sequoiadendron giganteum HOM05D004716 ORTHO05D005646 4.0e-13 80.9 169 36.1
CSS0021208 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 2.0e-12 78.6 166 36.1
Psat6g193080 Pisum sativum HOM05D000257 ORTHO05D008537 1.7e-08 65.5 74 50.0
PGSC0003DMG401024092 Solanum tuberosum HOM05D004716 ORTHO05D005646 5.6e-07 60.5 173 45.7
Oeu014494.1 Olea europaea HOM05D004716 ORTHO05D005646 1.6e-06 58.9 165 32.7


User provided reference genes

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