Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 2.8e-79 298.5 148 100.0
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 1.1e-78 296.6 148 98.6
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 1.2e-58 229.9 145 72.4
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 8.8e-57 223.8 146 70.5
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.2e-56 223.4 145 71.0
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.2e-56 223.4 145 71.0
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 1.2e-56 223.4 146 71.2
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 7.5e-56 220.7 146 69.2
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.8e-54 216.1 148 66.9
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 2.4e-54 215.7 144 69.4
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 3.1e-54 215.3 147 67.3
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 4.1e-54 214.9 146 67.8
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 1.2e-53 213.4 148 65.5
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 1.6e-53 213.0 136 71.3
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 2.0e-53 212.6 146 65.8
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 2.0e-53 212.6 148 68.9
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 2.0e-53 212.6 146 67.8
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 3.5e-53 211.8 146 67.1
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 5.9e-53 211.1 146 67.8
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 7.7e-53 210.7 146 65.8
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 2.2e-52 209.1 148 65.5
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 2.9e-52 208.8 146 65.8
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 2.9e-52 208.8 147 68.0
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 3.8e-52 208.4 146 65.8
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 6.5e-52 207.6 146 65.1
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 6.5e-52 207.6 145 64.8
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 8.5e-52 207.2 147 66.0
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 1.1e-51 206.8 146 65.8
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 1.5e-51 206.5 148 65.5
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 1.5e-51 206.5 170 60.6
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 1.9e-51 206.1 146 65.1
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 1.9e-51 206.1 146 65.1
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.9e-51 206.1 170 60.0
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 1.9e-51 206.1 146 64.4
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 4.2e-51 204.9 146 63.7
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 5.5e-51 204.5 146 65.1
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 7.2e-51 204.1 146 65.1
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 9.4e-51 203.8 166 59.0
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 1.2e-50 203.4 146 63.7
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 1.6e-50 203.0 147 65.3
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 1.6e-50 203.0 146 63.7
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 4.7e-50 201.4 146 63.0
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 6.1e-50 201.1 146 63.0
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 8.0e-50 200.7 146 63.7
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 8.0e-50 200.7 146 61.0
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 1.0e-49 200.3 147 63.9
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 1.4e-49 199.9 146 64.4
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 1.4e-49 199.9 146 61.6
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 1.8e-49 199.5 145 63.4
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 2.3e-49 199.1 146 63.0
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 2.3e-49 199.1 146 63.7
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 3.0e-49 198.7 146 66.4
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 4.0e-49 198.4 146 62.3
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 5.2e-49 198.0 146 62.3
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 5.2e-49 198.0 146 62.3
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 5.2e-49 198.0 149 63.1
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 8.8e-49 197.2 146 64.4
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 1.5e-48 196.4 146 61.0
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 2.0e-48 196.1 147 62.6
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 2.0e-48 196.1 147 62.6
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 2.0e-48 196.1 146 61.6
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 2.0e-48 196.1 146 63.0
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 2.6e-48 195.7 212 49.1
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 3.4e-48 195.3 146 60.3
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 3.4e-48 195.3 151 62.9
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 3.4e-48 195.3 146 63.0
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 3.4e-48 195.3 146 61.0
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 4.4e-48 194.9 146 63.7
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 9.8e-48 193.7 176 55.7
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 1.7e-47 193.0 147 59.9
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 2.8e-47 192.2 147 61.2
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 2.8e-47 192.2 169 59.2
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 3.7e-47 191.8 145 60.7
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 3.7e-47 191.8 129 70.5
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 4.8e-47 191.4 147 60.5
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 6.3e-47 191.0 152 61.8
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 8.3e-47 190.7 146 62.3
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.1e-46 190.3 147 61.2
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.1e-46 190.3 147 61.9
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 1.1e-46 190.3 146 63.7
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 1.1e-46 190.3 163 57.7
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 1.4e-46 189.9 146 59.6
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 1.4e-46 189.9 146 60.3
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 5.4e-46 188.0 184 52.7
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 5.9e-45 184.5 146 58.9
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 5.9e-45 184.5 146 58.9
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 1.7e-44 183.0 145 57.9
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 3.8e-44 181.8 146 56.8
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 7.2e-43 177.6 147 53.1
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 1.4e-41 173.3 134 60.4
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 1.7e-39 166.4 146 54.1
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 2.2e-39 166.0 124 62.1
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.0e-36 157.1 120 59.2
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 2.5e-35 152.5 119 58.0
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 3.6e-34 148.7 109 66.1
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 8.9e-33 144.1 103 67.0
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 2.0e-32 142.9 97 67.0
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 7.3e-27 124.4 146 48.6
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 4.4e-24 115.2 102 52.9
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 6.4e-23 111.3 99 48.5
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 7.8e-21 104.4 129 37.2
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.7e-20 103.2 66 71.2
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 2.3e-20 102.8 67 70.1
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 4.3e-19 98.6 82 58.5
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 4.0e-17 92.0 128 43.0
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.2e-16 90.5 64 62.5
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 2.6e-16 89.4 101 50.5
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 1.4e-14 83.6 145 33.1
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.9e-14 83.2 77 51.9
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.9e-14 83.2 45 82.2
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 6.6e-12 74.7 137 28.5
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 3.6e-10 68.9 64 54.7
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 2.6e-08 62.8 66 43.9
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 3.8e-07 58.9 38 65.8


User provided reference genes

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