Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO232G0006 Papaver somniferum HOM05D043442 ORTHO05D000501 9.0e-130 466.8 222 100.0
PSO229G0078 Papaver somniferum HOM05D000002 ORTHO05D000001 4.7e-22 109.0 191 34.0
Medtr2g021910 Medicago truncatula HOM05D000001 ORTHO05D000501 1.9e-15 87.0 170 32.4
RhsimUnG0138300 Rhododendron simsii HOM05D000001 ORTHO05D000501 3.3e-15 86.3 155 32.9
PSO541G4853 Papaver somniferum HOM05D000001 ORTHO05D000501 1.4e-13 80.9 91 40.7
Duzib150G0052 Durio zibethinus HOM05D000001 ORTHO05D000501 1.8e-13 80.5 179 30.2
Duzib150G1417 Durio zibethinus HOM05D000001 ORTHO05D000501 5.3e-13 79.0 177 31.1
Haze_04103 Corylus avellana HOM05D000001 ORTHO05D000501 1.2e-12 77.8 113 38.9
CsaV3_3G041380 Cucumis sativus L. HOM05D000001 ORTHO05D000501 1.5e-12 77.4 140 34.3
Pp3c2_17290 Physcomitrium patens HOM05D000001 ORTHO05D000501 1.5e-12 77.4 122 37.7
Sed0005369 Sechium edule HOM05D000001 ORTHO05D000501 2.0e-12 77.0 156 32.1
Thecc.10G163400 Theobroma cacao HOM05D000001 ORTHO05D000501 2.0e-12 77.0 121 38.0
VMungo0485G0002 Vigna mungo HOM05D000001 ORTHO05D000501 4.5e-12 75.9 157 28.7
VMungo0720G1318 Vigna mungo HOM05D000001 ORTHO05D000501 4.5e-12 75.9 161 29.2
ClCG10G015160 Citrullus lanatus HOM05D000001 ORTHO05D000501 9.9e-12 74.7 115 37.4
Phvul.004G064100 Phaseolus vulgaris HOM05D000001 ORTHO05D000501 9.9e-12 74.7 162 29.6
Thecc.09G278400 Theobroma cacao HOM05D008337 ORTHO05D000501 9.9e-12 74.7 197 28.9
PSO339G3613 Papaver somniferum HOM05D043442 ORTHO05D000501 1.3e-11 74.3 80 42.5
Cfa000442 Carpinus fangiana HOM05D000001 ORTHO05D000501 2.9e-11 73.2 128 33.6
Medtr2g021830 Medicago truncatula HOM05D000001 ORTHO05D000501 3.8e-11 72.8 100 37.0
Gohir.A10G227266 Gossypium hirsutum HOM05D001457 ORTHO05D000501 4.9e-11 72.4 121 36.4
Sed0017935 Sechium edule HOM05D000001 ORTHO05D000501 6.4e-11 72.0 172 29.1
Aqoxy5G04155 Aquilegia oxysepala HOM05D000001 ORTHO05D000501 8.4e-11 71.6 128 32.8
Cfa006668 Carpinus fangiana HOM05D000001 ORTHO05D000501 1.4e-10 70.9 118 38.1
Thecc.10G164500 Theobroma cacao HOM05D000001 ORTHO05D000501 1.4e-10 70.9 194 31.4
Thecc.10G164700 Theobroma cacao HOM05D000001 ORTHO05D000501 1.4e-10 70.9 205 31.7
ClCG10G015080 Citrullus lanatus HOM05D000001 ORTHO05D000501 1.9e-10 70.5 139 29.5
Gohir.A10G143500 Gossypium hirsutum HOM05D000001 ORTHO05D000501 1.9e-10 70.5 120 35.0
Sed0003120 Sechium edule HOM05D000001 ORTHO05D000501 2.4e-10 70.1 192 30.2
Duzib150G1637 Durio zibethinus HOM05D008337 ORTHO05D000501 3.2e-10 69.7 216 26.9
Gorai.011G276400 Gossypium raimondii HOM05D001457 ORTHO05D029874 4.2e-10 69.3 125 36.0
Psat7g148720 Pisum sativum HOM05D000001 ORTHO05D000501 4.2e-10 69.3 165 29.1
Gohir.D10G240800 Gossypium hirsutum HOM05D001457 ORTHO05D029816 5.4e-10 68.9 121 35.5
ClCG09G018200 Citrullus lanatus HOM05D000001 ORTHO05D000501 9.3e-10 68.2 137 30.7
Gorai.011G281000 Gossypium raimondii HOM05D001457 ORTHO05D000501 9.3e-10 68.2 124 34.7
Cfa000496 Carpinus fangiana HOM05D000001 ORTHO05D000501 1.2e-09 67.8 113 33.6
Aqoxy4G03268 Aquilegia oxysepala HOM05D026885 ORTHO05D026721 1.6e-09 67.4 166 27.7
Aqoxy5G04163 Aquilegia oxysepala HOM05D000001 ORTHO05D021353 1.6e-09 67.4 128 32.0
Gorai.011G136200 Gossypium raimondii HOM05D000001 ORTHO05D000501 3.5e-09 66.2 159 30.8
Sed0005085 Sechium edule HOM05D000001 ORTHO05D000501 6.0e-09 65.5 113 34.5
Thecc.10G163200 Theobroma cacao HOM05D000001 ORTHO05D000501 6.0e-09 65.5 125 34.4
Gorai.011G213300 Gossypium raimondii HOM05D008337 ORTHO05D000501 7.9e-09 65.1 182 31.9
Gorai.011G276200 Gossypium raimondii HOM05D000001 ORTHO05D022812 7.9e-09 65.1 149 30.9
Sed0012330 Sechium edule HOM05D054807 ORTHO05D000501 7.9e-09 65.1 101 33.7
arahy.Tifrunner.gnm1.ann1.1LGD4F Arachis hypogaea HOM05D000001 ORTHO05D000501 1.3e-08 64.3 141 27.7
BcaC06g31207 Brassica carinata HOM05D000001 ORTHO05D000501 1.3e-08 64.3 170 29.4
CsaV3_3G036320 Cucumis sativus L. HOM05D000001 ORTHO05D000501 1.3e-08 64.3 114 29.8
FAN24G1304 Fragaria x ananassa HOM05D000001 ORTHO05D000501 1.3e-08 64.3 231 26.4
Medtr0002s1200 Medicago truncatula HOM05D000001 ORTHO05D000501 1.3e-08 64.3 115 35.7
Glyma.07G059300 Glycine max HOM05D000001 ORTHO05D000501 2.3e-08 63.5 158 30.4
Mapoly0015s0142 Marchantia polymorpha HOM05D000001 ORTHO05D000501 2.3e-08 63.5 110 28.2
PRCOL_00004971 Prasinoderma coloniale HOM05D000001 ORTHO05D000501 2.3e-08 63.5 113 28.3
Sc13g0007230 Simmondsia chinensis HOM05D034300 ORTHO05D011474 2.3e-08 63.5 157 25.5
Gohir.D10G190300 Gossypium hirsutum HOM05D008337 ORTHO05D000501 3.0e-08 63.2 182 31.3
Medtr5g040940 Medicago truncatula HOM05D000001 ORTHO05D000501 3.0e-08 63.2 142 30.3
Phvul.002G170800 Phaseolus vulgaris HOM05D000001 ORTHO05D000501 3.9e-08 62.8 189 25.9
Thhalv10004863m.g Eutrema salsugineum HOM05D000001 ORTHO05D000501 5.1e-08 62.4 148 31.1
Gohir.D10G240500 Gossypium hirsutum HOM05D001457 ORTHO05D029874 5.1e-08 62.4 125 34.4
Gohir.D10G241200 Gossypium hirsutum HOM05D001457 ORTHO05D029874 5.1e-08 62.4 125 34.4
Phvul.010G110200 Phaseolus vulgaris HOM05D000001 ORTHO05D000501 5.1e-08 62.4 124 30.6
BcaC06g34026 Brassica carinata HOM05D000001 ORTHO05D000501 6.7e-08 62.0 170 28.8
A06p43340 Brassica napus HOM05D000001 ORTHO05D000501 6.7e-08 62.0 170 28.8
C07p33610 Brassica napus HOM05D000001 ORTHO05D000501 6.7e-08 62.0 170 28.8
BraA06t27220Z Brassica rapa HOM05D000001 ORTHO05D000501 6.7e-08 62.0 170 28.8
BolC7t43871H Brassica oleracea HOM05D000001 ORTHO05D000501 8.7e-08 61.6 170 28.8
Glyma.20G036100 Glycine max HOM05D000001 ORTHO05D000501 8.7e-08 61.6 181 26.0
Aqoxy7G03498 Aquilegia oxysepala HOM05D000001 ORTHO05D021350 1.1e-07 61.2 105 32.4
CARHR145410 Cardamine hirsuta HOM05D000001 ORTHO05D000501 1.1e-07 61.2 139 30.9
Sp2g14030 Schrenkiella parvula HOM05D000001 ORTHO05D000501 1.1e-07 61.2 170 28.8
Sed0009372 Sechium edule HOM05D000001 ORTHO05D000501 1.5e-07 60.8 161 28.6
CAN.G736.4 Capsicum annuum HOM05D000001 ORTHO05D000501 1.9e-07 60.5 133 27.8
Actinidia23809 Actinidia chinensis HOM05D000001 ORTHO05D000501 2.5e-07 60.1 124 29.0
DCAR_018604 Daucus carota HOM05D002283 ORTHO05D005725 2.5e-07 60.1 148 29.7
Manes.04G084851 Manihot esculenta HOM05D000001 ORTHO05D000501 2.5e-07 60.1 122 29.5
BcaB07g30314 Brassica carinata HOM05D000001 ORTHO05D000501 4.3e-07 59.3 145 30.3
Glyma.16G028200 Glycine max HOM05D000001 ORTHO05D000501 5.6e-07 58.9 150 29.3
Aa31LG2G7350 Aethionema arabicum HOM05D000001 ORTHO05D000501 7.4e-07 58.5 139 29.5
Aqoxy1G03139 Aquilegia oxysepala HOM05D026885 ORTHO05D026721 7.4e-07 58.5 206 24.8
AT2G02990 Arabidopsis thaliana HOM05D000001 ORTHO05D000501 7.4e-07 58.5 148 28.4
A02p33210 Brassica napus HOM05D000001 ORTHO05D000501 7.4e-07 58.5 139 30.2
CsaV3_3G036410 Cucumis sativus L. HOM05D000001 ORTHO05D000501 7.4e-07 58.5 107 30.8
CsaV3_3G036550 Cucumis sativus L. HOM05D000001 ORTHO05D000501 7.4e-07 58.5 107 30.8
Gohir.A05G079350 Gossypium hirsutum HOM05D000001 ORTHO05D000501 7.4e-07 58.5 185 26.5
Rhsim10G0057700 Rhododendron simsii HOM05D000001 ORTHO05D000501 7.4e-07 58.5 155 29.0
TPR.G11011 Trifolium pratense HOM05D000001 ORTHO05D000501 7.4e-07 58.5 200 28.0
Gohir.A06G174500 Gossypium hirsutum HOM05D000001 ORTHO05D000501 9.6e-07 58.2 209 28.2
BraA02t08345Z Brassica rapa HOM05D000001 ORTHO05D000501 1.3e-06 57.8 145 28.3
FvH4_1g10040 Fragaria vesca HOM05D000001 ORTHO05D016299 1.3e-06 57.8 155 26.5
Dinv25964 Davidia involucrata HOM05D001403 ORTHO05D001313 1.6e-06 57.4 118 28.8
Medtr2g021750 Medicago truncatula HOM05D000172 ORTHO05D004529 1.6e-06 57.4 192 26.0
Carub.0005s0189 Capsella rubella HOM05D000001 ORTHO05D000501 2.1e-06 57.0 170 26.5
Prupe.6G319200 Prunus persica HOM05D000001 ORTHO05D000501 2.8e-06 56.6 109 33.0
TPR.G39233 Trifolium pratense HOM05D000001 ORTHO05D000501 2.8e-06 56.6 132 28.0
TPR.G5913 Trifolium pratense HOM05D000001 ORTHO05D000501 2.8e-06 56.6 171 27.5
AL5G12610 Arabidopsis lyrata HOM05D000001 ORTHO05D000501 3.6e-06 56.2 148 28.4
C02p51020 Brassica napus HOM05D000001 ORTHO05D000501 3.6e-06 56.2 145 29.0
Duzib133G0742 Durio zibethinus HOM05D000001 ORTHO05D000501 3.6e-06 56.2 124 29.0
BcaC03g17180 Brassica carinata HOM05D000001 ORTHO05D000501 4.8e-06 55.8 145 29.0
BolC2t11195H Brassica oleracea HOM05D000001 ORTHO05D000501 4.8e-06 55.8 145 29.0
CsaV3_5G038060 Cucumis sativus L. HOM05D000001 ORTHO05D000501 4.8e-06 55.8 137 27.7
Prupe.8G184700 Prunus persica HOM05D000001 ORTHO05D000501 4.8e-06 55.8 150 26.7
THA.LOC104815389 Tarenaya hassleriana HOM05D000001 ORTHO05D000501 4.8e-06 55.8 124 30.6
CSS0002875 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000501 6.2e-06 55.5 169 27.2
Gohir.A07G195000 Gossypium hirsutum HOM05D000001 ORTHO05D000501 6.2e-06 55.5 124 29.0
Gohir.D07G201400 Gossypium hirsutum HOM05D000001 ORTHO05D000501 6.2e-06 55.5 124 29.0
Gorai.001G226100 Gossypium raimondii HOM05D000001 ORTHO05D000501 6.2e-06 55.5 124 29.0
THA.LOC104805163 Tarenaya hassleriana HOM05D000001 ORTHO05D000501 6.2e-06 55.5 135 28.1
VMungo1215G1461 Vigna mungo HOM05D000001 ORTHO05D000501 6.2e-06 55.5 117 28.2
Psat2g119520 Pisum sativum HOM05D000001 ORTHO05D000501 8.1e-06 55.1 141 29.1


User provided reference genes

Program Settings