Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 2.6e-210 735.3 429 100.0
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.9e-200 702.6 468 90.2
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 6.5e-84 315.5 462 49.8
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 2.4e-70 270.4 455 44.2
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 4.1e-70 269.6 476 46.0
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.0e-69 267.3 479 43.0
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 2.6e-69 266.9 470 43.8
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 7.7e-69 265.4 485 40.4
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 3.6e-66 256.5 466 42.5
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 7.9e-66 255.4 435 43.7
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 7.9e-66 255.4 473 41.4
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 5.1e-65 252.7 494 45.7
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 8.8e-65 251.9 488 45.1
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 8.8e-65 251.9 492 39.0
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 5.7e-64 249.2 493 38.7
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 3.7e-63 246.5 469 45.2
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.4e-62 244.6 462 44.6
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.4e-62 244.6 484 45.0
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.8e-62 244.2 463 45.8
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 3.1e-62 243.4 461 44.0
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 4.1e-62 243.0 480 41.7
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 4.1e-62 243.0 451 41.5
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.0e-61 240.7 464 45.7
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 5.9e-61 239.2 478 38.7
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 2.9e-60 236.9 459 40.5
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 3.8e-60 236.5 479 40.9
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 6.5e-60 235.7 433 47.1
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 2.5e-59 233.8 476 41.0
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 9.4e-59 231.9 472 41.7
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 7.9e-58 228.8 471 38.9
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 1.0e-57 228.4 476 41.4
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 3.9e-57 226.5 475 40.0
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 2.0e-56 224.2 458 43.7
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 2.0e-56 224.2 434 41.2
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 2.0e-56 224.2 409 43.3
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.7e-55 221.1 471 39.1
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 2.2e-55 220.7 478 38.1
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 6.3e-55 219.2 464 41.8
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 2.2e-52 210.7 464 39.9
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 6.5e-52 209.1 421 41.1
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 7.2e-51 205.7 452 38.1
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.7e-50 203.8 427 39.8
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 3.9e-49 199.9 427 39.3
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 9.7e-48 195.3 454 39.6
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 1.3e-47 194.9 416 44.7
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 8.2e-47 192.2 470 37.4
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 8.2e-47 192.2 418 39.7
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 4.1e-46 189.9 456 35.1
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 4.1e-46 189.9 457 40.0
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.0e-45 187.6 437 37.1
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.0e-45 187.6 414 38.9
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 1.7e-44 184.5 470 34.9
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.1e-43 181.8 468 33.1
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 2.1e-42 177.6 423 35.0
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 3.6e-42 176.8 441 37.6
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 6.1e-42 176.0 459 34.9
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 1.0e-41 175.3 352 38.6
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 3.0e-41 173.7 420 37.9
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 1.2e-40 171.8 349 39.0
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 1.2e-40 171.8 378 36.2
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 4.8e-39 166.4 493 34.9
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 8.3e-39 165.6 444 34.2
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 8.3e-39 165.6 505 35.8
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 4.1e-38 163.3 449 32.5
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 9.1e-38 162.2 418 35.9
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 3.5e-37 160.2 408 41.9
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 2.2e-36 157.5 437 38.9
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 3.8e-36 156.8 447 32.7
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 1.1e-35 155.2 418 35.4
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 2.5e-35 154.1 385 43.9
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 3.2e-35 153.7 235 43.4
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 7.2e-35 152.5 424 32.1
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 1.2e-34 151.8 445 44.0
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 3.6e-34 150.2 325 39.7
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 4.7e-34 149.8 394 35.3
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 6.1e-34 149.4 456 36.4
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 8.0e-34 149.1 433 42.5
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.0e-33 147.1 409 35.0
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 4.0e-33 146.7 404 39.4
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 7.5e-32 142.5 425 34.4
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 9.8e-32 142.1 298 41.6
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 1.4e-30 138.3 430 37.0
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 1.8e-30 137.9 136 54.4
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 5.4e-30 136.3 363 31.7
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.2e-29 135.2 410 37.6
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 1.0e-28 132.1 157 49.0
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.7e-28 131.3 183 43.7
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 3.8e-28 130.2 361 35.5
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 1.5e-27 128.3 403 31.5
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 1.9e-27 127.9 344 38.4
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 4.4e-24 116.7 394 36.0
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.7e-23 114.8 435 29.4
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 9.2e-22 109.0 440 30.2
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 8.6e-20 102.4 389 30.6
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 8.6e-20 102.4 331 30.2
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 7.3e-19 99.4 317 30.9
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 1.8e-17 94.7 347 27.7
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 2.3e-17 94.4 330 35.2
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 8.9e-17 92.4 132 42.4
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.2e-16 92.0 253 33.6
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 2.0e-16 91.3 136 56.6
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 3.4e-16 90.5 331 36.9
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 4.4e-16 90.1 328 34.5
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 9.8e-16 89.0 328 34.1
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 9.8e-16 89.0 328 34.1
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 9.8e-16 89.0 261 37.2
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 4.9e-15 86.7 331 34.4
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 4.9e-15 86.7 331 34.4
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 6.4e-15 86.3 336 33.6
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 6.4e-15 86.3 336 33.6
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.4e-14 84.3 334 36.2
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 3.2e-14 84.0 353 36.0
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 3.2e-14 84.0 285 28.8
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 4.1e-14 83.6 121 50.4
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 1.2e-13 82.0 328 37.2
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 2.7e-13 80.9 336 34.5
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 3.5e-13 80.5 328 37.2
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 6.0e-13 79.7 328 37.2
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 6.0e-13 79.7 328 37.2
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 1.0e-12 79.0 423 26.7
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 1.7e-12 78.2 328 36.6
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 8.6e-12 75.9 126 41.3
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 4.3e-11 73.6 405 39.0
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.1e-10 71.2 321 25.5
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 3.6e-10 70.5 160 42.5
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 3.6e-10 70.5 122 45.9
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 6.2e-10 69.7 122 46.7
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.1e-09 68.9 198 36.4
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 1.1e-09 68.9 308 31.8
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 1.4e-09 68.6 337 30.0
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 6.8e-09 66.2 104 47.1
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 9.8e-08 62.4 323 24.8
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.3e-07 62.0 385 26.8
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 3.7e-07 60.5 32 93.8
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 8.3e-07 59.3 311 25.7
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 8.3e-07 59.3 538 22.5
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.1e-06 58.9 64 50.0
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 1.1e-06 58.9 85 38.8
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 7.1e-06 56.2 421 29.2


User provided reference genes

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