Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 9.6e-183 643.7 397 100.0
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 6.2e-182 641.0 397 99.7
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 3.9e-160 568.5 393 91.9
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-159 565.5 357 100.0
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-159 565.5 357 100.0
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 2.3e-91 340.1 403 66.0
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 5.1e-83 312.4 393 63.4
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 3.5e-68 263.1 334 56.6
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-56 223.4 329 51.7
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 9.9e-55 218.4 310 54.8
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 3.5e-52 209.9 314 50.0
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-47 194.9 343 49.0
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 4.6e-44 183.0 342 45.3
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-40 171.8 213 46.5
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-40 170.2 233 54.9
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-38 164.9 304 40.8
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-37 160.6 208 59.1
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-35 155.2 212 42.0
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-35 155.2 250 50.8
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 1.9e-34 151.0 342 42.1
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.6e-33 147.9 297 35.0
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-33 147.9 179 47.5
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 3.7e-33 146.7 302 39.4
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-32 144.4 296 40.9
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 9.0e-32 142.1 294 42.9
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 1.9e-29 134.4 292 39.7
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 1.6e-28 131.3 305 31.1
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 4.6e-28 129.8 305 38.4
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 7.9e-28 129.0 297 41.1
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 1.4e-27 128.3 304 39.5
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 3.9e-27 126.7 288 42.0
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 6.7e-27 125.9 292 41.8
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 8.8e-27 125.6 294 39.8
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 8.8e-27 125.6 294 39.8
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 8.8e-27 125.6 287 41.8
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 1.5e-26 124.8 287 40.4
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.5e-26 124.8 288 42.7
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 1.5e-26 124.8 288 42.7
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 1.5e-26 124.8 287 40.4
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 2.0e-26 124.4 303 39.9
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-26 124.4 312 38.1
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 2.5e-26 124.0 287 42.2
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-26 123.6 189 49.2
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 4.3e-26 123.2 323 36.2
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 7.4e-26 122.5 287 40.8
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 7.4e-26 122.5 301 39.2
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 2.2e-25 120.9 289 40.1
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 2.8e-25 120.6 277 33.6
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 2.8e-25 120.6 332 35.5
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 4.8e-25 119.8 286 39.5
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 6.3e-25 119.4 287 41.1
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 5.3e-24 116.3 291 39.5
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 6.9e-24 115.9 288 29.5
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 9.1e-24 115.5 287 39.4
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 9.1e-24 115.5 315 28.3
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 2.0e-23 114.4 288 38.9
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 4.5e-23 113.2 288 37.8
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 7.7e-23 112.5 298 39.3
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 1.0e-22 112.1 293 38.6
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.2e-22 110.9 315 30.8
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 6.5e-22 109.4 302 37.7
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 8.5e-22 109.0 288 28.8
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 8.5e-22 109.0 262 43.1
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 8.5e-22 109.0 290 38.6
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 1.1e-21 108.6 286 39.5
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 4.2e-21 106.7 239 42.3
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 5.5e-21 106.3 296 36.1
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 7.2e-21 105.9 283 39.9
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 9.4e-21 105.5 287 37.3
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 2.1e-20 104.4 300 34.3
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 4.7e-20 103.2 302 36.4
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 7.9e-20 102.4 302 36.4
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 1.4e-19 101.7 284 37.7
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 2.3e-19 100.9 287 38.3
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 3.0e-19 100.5 287 37.3
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 6.7e-19 99.4 275 30.5
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.1e-18 98.6 308 28.6
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 2.6e-18 97.4 301 36.9
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-18 97.4 148 52.0
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 2.6e-18 97.4 286 38.1
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 3.3e-18 97.1 303 37.0
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 4.4e-18 96.7 153 41.2
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 5.7e-18 96.3 236 41.5
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 5.7e-18 96.3 172 53.5
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 7.4e-18 95.9 303 35.6
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 2.2e-17 94.4 287 35.2
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 3.7e-17 93.6 287 33.8
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-17 93.6 90 57.8
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 4.8e-17 93.2 287 33.8
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 1.4e-16 91.7 302 36.8
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 4.1e-16 90.1 282 37.6
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 7.0e-16 89.4 298 34.9
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 1.2e-15 88.6 287 36.6
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 2.6e-15 87.4 287 36.6
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 5.9e-15 86.3 152 38.8
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 7.7e-15 85.9 362 26.2
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 7.7e-15 85.9 291 27.8
PSO017G7049 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-14 85.5 209 32.1
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.6e-12 78.2 273 38.5
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 2.7e-12 77.4 273 38.8
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 3.6e-12 77.0 136 34.6
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 6.1e-12 76.3 100 42.0
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 1.0e-11 75.5 100 42.0
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 3.0e-11 73.9 100 40.0
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 4.0e-11 73.6 100 42.0
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 1.5e-10 71.6 110 37.3
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 4.4e-10 70.1 265 36.6
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 5.7e-10 69.7 248 27.0
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 9.7e-10 68.9 166 47.0
PSO017G0278 Papaver somniferum HOM05D000500 ORTHO05D007664 2.4e-08 64.3 90 42.2
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 1.2e-07 62.0 222 38.7
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 2.0e-07 61.2 140 28.6
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 2.0e-07 61.2 294 32.0
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 1.7e-06 58.2 105 36.2
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.7e-06 58.2 284 33.8
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 1.7e-06 58.2 298 22.1
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 3.8e-06 57.0 167 38.3
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 5.0e-06 56.6 163 29.4
Ca_06859_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 6.5e-06 56.2 89 38.2


User provided reference genes

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