Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 3.5e-270 934.5 510 100.0
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 4.3e-252 874.4 510 94.1
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 3.2e-154 549.3 516 57.8
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 2.0e-153 546.6 512 58.4
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 2.4e-146 523.1 515 55.9
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 3.5e-145 519.2 515 55.3
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 3.0e-144 516.2 518 54.8
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 4.3e-143 512.3 515 54.2
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 4.4e-140 502.3 514 54.1
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 8.3e-139 498.0 511 53.2
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.9e-138 496.9 512 52.9
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 5.4e-138 495.4 513 53.2
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 6.0e-137 491.9 514 52.7
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 7.8e-137 491.5 514 52.7
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 3.0e-136 489.6 510 52.0
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.5e-135 487.3 518 52.9
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 1.9e-135 486.9 514 52.5
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.6e-134 482.6 512 53.9
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 3.6e-134 482.6 526 51.7
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.8e-133 480.3 514 52.5
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.8e-133 480.3 514 52.5
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 2.4e-133 479.9 519 49.1
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 5.2e-133 478.8 515 50.3
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 8.9e-133 478.0 519 52.6
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.5e-132 477.2 515 52.6
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 2.0e-132 476.9 534 47.8
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 9.9e-132 474.6 507 49.7
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 1.7e-131 473.8 511 49.7
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 2.2e-131 473.4 424 56.6
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 1.9e-130 470.3 525 53.1
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 1.2e-129 467.6 512 50.0
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 2.1e-129 466.8 498 54.6
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 2.7e-129 466.5 513 49.5
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 1.3e-128 464.2 513 49.9
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 2.3e-128 463.4 509 52.1
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 8.7e-128 461.5 516 49.2
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 8.7e-128 461.5 514 49.6
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 5.6e-127 458.8 509 50.1
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 7.3e-127 458.4 520 47.9
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.6e-126 457.2 516 51.6
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 4.7e-126 455.7 519 52.2
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 8.1e-126 454.9 506 50.6
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.0e-125 452.6 497 50.1
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.2e-124 451.1 500 50.8
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 5.8e-124 448.7 508 48.6
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 5.8e-124 448.7 513 48.5
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 9.9e-124 448.0 500 51.4
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 9.9e-124 448.0 487 49.9
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 2.2e-123 446.8 472 53.4
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 3.8e-123 446.0 510 52.7
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 8.4e-123 444.9 506 51.8
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.9e-122 443.7 509 49.1
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.6e-121 440.7 419 52.7
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.5e-121 439.5 513 48.1
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.3e-120 437.6 507 52.3
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.3e-120 437.6 514 44.4
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 3.0e-120 436.4 511 50.3
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 3.0e-120 436.4 513 50.3
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 3.0e-120 436.4 507 47.3
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 5.1e-120 435.6 505 51.3
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 8.7e-120 434.9 518 48.6
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 8.7e-120 434.9 519 49.1
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.1e-119 434.5 514 49.8
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 4.3e-119 432.6 515 50.7
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 2.8e-118 429.9 493 50.7
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 1.8e-117 427.2 512 50.8
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 4.0e-117 426.0 512 50.0
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 6.9e-117 425.2 515 49.7
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 2.0e-116 423.7 509 47.7
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 4.5e-116 422.5 509 50.5
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.3e-115 421.0 516 48.1
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 1.7e-115 420.6 509 47.3
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.8e-115 419.5 518 46.7
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 4.9e-115 419.1 465 53.8
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 6.4e-115 418.7 494 47.4
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 3.2e-114 416.4 513 46.2
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 5.4e-114 415.6 518 46.5
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.2e-113 414.5 516 46.7
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.0e-112 411.4 516 46.5
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 3.9e-112 409.5 494 46.6
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.5e-111 406.8 515 44.1
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 4.3e-111 406.0 494 46.4
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 8.1e-110 401.7 517 45.6
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 9.0e-109 398.3 489 48.9
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 5.8e-108 395.6 489 45.8
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 9.9e-108 394.8 499 46.3
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 8.4e-107 391.7 498 46.6
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.1e-106 391.3 494 46.0
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 3.2e-106 389.8 500 47.0
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 7.1e-106 388.7 388 50.5
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-105 387.5 489 45.8
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.7e-105 386.7 479 50.1
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 5.1e-104 382.5 388 53.9
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 6.7e-104 382.1 398 51.0
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 6.7e-104 382.1 496 45.8
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.1e-103 381.3 366 52.2
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 3.1e-101 373.2 509 46.8
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.2e-100 371.3 514 44.9
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.0e-91 341.7 335 50.4
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 9.7e-79 298.5 386 43.0
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.4e-76 290.0 270 53.3
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.9e-67 260.4 222 57.2
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 5.0e-67 259.6 196 62.2
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 5.0e-67 259.6 196 62.2
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 5.0e-67 259.6 533 37.3
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.9e-66 257.7 342 44.4
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.2e-63 248.4 325 46.8
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 4.4e-63 246.5 501 34.7
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 2.8e-62 243.8 160 68.1
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 4.1e-61 240.0 525 34.3
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.9e-50 204.5 428 32.9
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 9.5e-42 175.6 279 35.1
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 8.1e-25 119.4 171 40.4
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 3.1e-24 117.5 145 43.4
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 2.6e-23 114.4 118 45.8
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 3.7e-22 110.5 118 48.3
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.6e-20 105.1 118 46.6
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 2.1e-20 104.8 193 41.5
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.3e-19 102.1 118 46.6
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 6.2e-17 93.2 224 27.2
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 3.1e-16 90.9 124 41.1
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 1.9e-13 81.6 118 39.0
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-10 72.0 171 38.0
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.4e-08 65.5 37 70.3


User provided reference genes

Program Settings