Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 6.2e-260 900.2 432 100.0
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 7.3e-253 876.7 432 97.2
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 3.5e-194 681.8 428 74.5
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 3.6e-191 671.8 432 73.1
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.9e-184 649.4 422 71.1
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.2e-184 648.3 427 69.8
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 6.1e-183 644.4 429 70.4
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 3.0e-182 642.1 425 69.6
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 4.0e-182 641.7 426 70.4
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.6e-181 639.0 424 70.3
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.6e-181 639.0 424 70.3
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.3e-181 638.6 422 70.6
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 2.8e-180 635.6 423 70.7
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 3.7e-180 635.2 422 70.1
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.1e-179 633.6 424 68.9
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 2.4e-179 632.5 423 70.0
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.3e-179 631.3 422 69.9
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 7.0e-179 630.9 422 68.5
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 7.0e-179 630.9 424 68.6
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.2e-178 630.2 423 69.5
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 1.6e-178 629.8 426 67.1
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 1.6e-178 629.8 427 68.4
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 2.0e-178 629.4 422 69.2
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 3.5e-178 628.6 427 67.4
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.0e-177 627.1 425 68.2
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 1.0e-177 627.1 429 67.6
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 2.2e-177 625.9 430 66.7
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 3.8e-177 625.2 421 69.1
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.1e-176 623.6 422 68.7
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.1e-176 623.6 422 68.7
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 3.2e-176 622.1 422 67.5
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 4.2e-176 621.7 427 67.7
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 9.4e-176 620.5 421 67.7
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.7e-175 619.0 422 67.3
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 3.6e-175 618.6 426 66.7
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 3.6e-175 618.6 424 67.7
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 3.6e-175 618.6 424 68.4
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 4.7e-175 618.2 423 67.1
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 6.1e-175 617.8 416 67.5
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.0e-175 617.5 416 67.5
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 1.0e-174 617.1 422 69.0
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 1.8e-174 616.3 423 69.3
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 2.3e-174 615.9 421 67.5
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 3.0e-174 615.5 424 67.9
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 3.0e-174 615.5 425 66.4
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 4.0e-174 615.1 421 66.0
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 5.2e-174 614.8 416 67.3
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 5.2e-174 614.8 426 65.3
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.2e-173 613.6 427 67.0
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.0e-173 612.8 416 67.1
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 2.6e-173 612.5 421 65.8
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 2.6e-173 612.5 428 67.5
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 4.4e-173 611.7 425 67.5
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.4e-173 611.7 416 66.8
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 4.4e-173 611.7 426 65.3
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 5.7e-173 611.3 435 66.0
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 5.7e-173 611.3 419 66.8
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 7.5e-173 610.9 423 66.9
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 9.8e-173 610.5 416 66.6
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 1.3e-172 610.1 422 66.1
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 2.8e-172 609.0 426 64.6
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 6.3e-172 607.8 418 68.4
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.1e-171 607.1 426 66.7
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.1e-171 607.1 424 65.6
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 1.8e-171 606.3 428 65.7
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 2.4e-171 605.9 422 66.4
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 5.4e-171 604.7 423 67.1
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 9.1e-171 604.0 422 64.7
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 3.8e-169 598.6 422 66.8
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 8.6e-169 597.4 426 65.7
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 8.6e-169 597.4 425 66.4
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 7.2e-168 594.3 427 65.1
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 1.2e-167 593.6 421 64.8
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 1.6e-167 593.2 423 66.2
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 4.7e-167 591.7 425 65.2
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 8.0e-167 590.9 429 64.6
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 8.0e-167 590.9 426 64.3
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 3.0e-166 589.0 426 64.3
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 8.9e-166 587.4 365 72.6
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 1.2e-165 587.0 422 65.9
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 2.0e-165 586.3 351 74.1
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 5.7e-165 584.7 423 64.5
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 9.8e-165 583.9 423 64.5
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.7e-164 583.2 426 63.6
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 4.9e-164 581.6 427 64.6
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 6.3e-164 581.3 426 63.8
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 6.3e-164 581.3 427 64.2
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 8.3e-164 580.9 421 63.4
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 8.3e-164 580.9 369 71.0
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 1.1e-163 580.5 423 63.8
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 1.4e-163 580.1 355 72.7
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.8e-163 579.7 420 63.6
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 4.1e-163 578.6 422 64.9
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 1.6e-162 576.6 421 62.7
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 7.8e-162 574.3 424 63.2
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 7.8e-162 574.3 424 63.2
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 2.9e-161 572.4 361 70.6
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 5.0e-161 571.6 412 65.8
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 1.1e-160 570.5 337 74.5
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 5.6e-160 568.2 420 63.6
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 1.2e-159 567.0 427 61.6
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 4.7e-159 565.1 424 61.8
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 4.7e-159 565.1 364 70.9
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 1.4e-158 563.5 357 70.0
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.5e-157 560.1 421 61.8
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 8.3e-156 554.3 426 61.7
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 1.4e-155 553.5 352 69.0
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.9e-155 553.1 335 71.9
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 5.6e-152 541.6 425 61.6
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 4.7e-151 538.5 404 62.4
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 3.1e-150 535.8 398 61.6
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.1e-142 510.8 431 59.2
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.2e-132 476.5 416 56.5
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 3.8e-132 475.7 282 72.7
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 4.9e-132 475.3 282 73.4
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 5.4e-131 471.9 352 58.8
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.5e-128 463.0 420 54.5
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.3e-127 460.7 357 62.2
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 3.4e-109 399.4 322 59.9
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 2.5e-96 356.7 209 73.7
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 9.7e-96 354.8 215 69.3
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.6e-95 354.0 211 73.0
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.2e-93 347.8 405 46.2
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 3.0e-89 333.2 308 52.3
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 2.8e-55 220.3 204 56.4
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.8e-46 191.0 346 37.0
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.7e-31 141.4 98 60.2
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 3.7e-23 113.6 80 58.8
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.1e-19 102.1 57 78.9
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 8.9e-17 92.4 125 44.0


User provided reference genes

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