Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 7.9e-112 407.1 208 100.0
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 2.4e-108 395.6 208 96.2
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 5.6e-57 224.9 195 61.0
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 1.5e-54 216.9 194 57.2
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 9.8e-54 214.2 173 62.4
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 2.9e-53 212.6 188 57.4
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.2e-51 207.2 185 62.2
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.2e-51 207.2 185 62.2
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 1.6e-51 206.8 154 63.6
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 3.5e-51 205.7 166 59.6
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 7.8e-51 204.5 173 59.0
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 1.3e-50 203.8 165 59.4
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 3.9e-50 202.2 160 61.2
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 5.0e-50 201.8 154 64.3
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 8.6e-50 201.1 202 51.5
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 1.5e-49 200.3 173 57.8
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 2.5e-49 199.5 189 56.6
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 2.5e-49 199.5 173 57.8
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 4.3e-49 198.7 154 63.6
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 4.3e-49 198.7 175 57.7
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 7.3e-49 198.0 153 61.4
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 9.5e-49 197.6 155 61.3
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 1.2e-48 197.2 153 62.1
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 2.1e-48 196.4 154 61.0
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 2.8e-48 196.1 165 62.4
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 6.2e-48 194.9 200 50.0
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 8.0e-48 194.5 199 52.8
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 8.0e-48 194.5 152 61.2
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 1.8e-47 193.4 155 58.7
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 3.1e-47 192.6 141 66.0
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 6.8e-47 191.4 155 60.0
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 1.5e-46 190.3 166 55.4
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 1.5e-46 190.3 205 54.6
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 1.5e-46 190.3 198 52.5
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 2.6e-46 189.5 195 53.3
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 4.4e-46 188.7 155 60.0
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 4.4e-46 188.7 154 60.4
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 4.4e-46 188.7 153 59.5
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 7.5e-46 188.0 155 60.0
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 1.3e-45 187.2 169 54.4
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 2.2e-45 186.4 184 51.6
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 2.2e-45 186.4 198 52.5
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 4.9e-45 185.3 152 59.9
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.9e-44 183.3 173 53.8
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 2.4e-44 183.0 218 45.9
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 3.2e-44 182.6 188 51.6
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 4.1e-44 182.2 197 49.7
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 4.1e-44 182.2 161 54.7
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 5.4e-44 181.8 161 54.0
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 9.2e-44 181.0 184 52.2
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 2.1e-43 179.9 195 49.7
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 2.1e-43 179.9 161 54.7
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 2.1e-43 179.9 156 59.0
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.7e-43 179.5 184 51.1
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.7e-43 179.5 179 52.5
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.7e-43 179.5 179 52.5
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 2.7e-43 179.5 197 49.2
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 3.5e-43 179.1 137 60.6
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 4.6e-43 178.7 175 53.1
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 4.6e-43 178.7 161 57.1
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 4.6e-43 178.7 151 60.9
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 7.8e-43 177.9 137 64.2
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 7.8e-43 177.9 135 63.0
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 7.8e-43 177.9 151 60.9
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 1.0e-42 177.6 189 49.7
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 1.3e-42 177.2 175 52.6
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 5.1e-42 175.3 144 56.2
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 6.6e-42 174.9 155 54.8
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 6.6e-42 174.9 155 54.2
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 6.6e-42 174.9 194 46.4
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.1e-41 174.1 179 52.5
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 1.5e-41 173.7 176 51.7
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.5e-41 173.7 175 52.0
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 1.9e-41 173.3 157 53.5
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 2.5e-41 172.9 187 50.3
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 4.3e-41 172.2 161 52.2
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 5.6e-41 171.8 198 48.0
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 5.6e-41 171.8 211 45.0
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 7.3e-41 171.4 192 47.4
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 7.3e-41 171.4 181 48.1
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 9.5e-41 171.0 176 52.3
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 1.2e-40 170.6 195 48.2
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 1.2e-40 170.6 154 54.5
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 2.1e-40 169.9 154 55.2
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 6.2e-40 168.3 201 45.3
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 1.8e-39 166.8 159 56.0
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 9.9e-38 161.0 189 47.6
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 1.7e-37 160.2 189 46.6
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 2.9e-37 159.5 155 54.8
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 3.7e-37 159.1 165 47.9
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 1.2e-35 154.1 123 61.8
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-34 149.8 176 43.8
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 1.9e-33 146.7 129 58.1
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 5.2e-31 138.7 125 54.4
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 5.8e-30 135.2 123 54.5
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 7.6e-30 134.8 106 61.3
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 7.6e-30 134.8 123 54.5
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.1e-28 131.0 171 45.0
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 9.2e-28 127.9 120 58.3
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 1.0e-26 124.4 200 39.0
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 4.3e-25 119.0 185 39.5
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 3.6e-24 115.9 97 57.7
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 1.1e-23 114.4 97 58.8
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 9.0e-23 111.3 73 69.9
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 3.4e-22 109.4 102 56.9
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 4.4e-22 109.0 126 46.8
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 5.8e-22 108.6 101 55.4
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 2.2e-21 106.7 114 50.0
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 7.8e-19 98.2 83 61.4
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 7.8e-19 98.2 166 38.0
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 7.8e-19 98.2 166 38.0
DCAR_021132 Daucus carota HOM05D000172 ORTHO05D008216 1.3e-18 97.4 80 61.2
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 3.0e-18 96.3 88 54.5
Aqoxy1G04172 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 1.4e-15 87.4 81 58.0
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 1.8e-15 87.0 141 38.3
CDE07G1564 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 2.4e-15 86.7 90 48.9
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 4.0e-15 85.9 64 59.4
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 1.5e-14 84.0 106 44.3
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 5.8e-14 82.0 67 58.2
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 4.9e-13 79.0 87 50.6
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 4.6e-11 72.4 43 76.7
Haze_12755 Corylus avellana HOM05D000172 ORTHO05D008216 6.0e-11 72.0 203 28.1
vmacro12152 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.3e-08 64.3 45 60.0
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 4.8e-08 62.4 108 38.0
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 4.0e-07 59.3 97 40.2
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 6.9e-07 58.5 68 48.5
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 6.9e-07 58.5 63 50.8


User provided reference genes

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