Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7536 Papaver somniferum HOM05D004556 ORTHO05D005298 3.0e-168 595.1 301 100.0
PSO832G3279 Papaver somniferum HOM05D004556 ORTHO05D005298 7.5e-164 580.5 301 98.0
TAR362G0361 Trochodendron aralioides HOM05D004556 ORTHO05D005298 2.0e-140 502.7 300 83.0
Aqoxy5G00420 Aquilegia oxysepala HOM05D004556 ORTHO05D005298 7.1e-138 494.2 300 82.0
Thecc.05G287400 Theobroma cacao HOM05D004556 ORTHO05D005298 7.1e-138 494.2 301 83.1
QL03p024856 Quercus lobata HOM05D004556 ORTHO05D005298 1.8e-136 489.6 300 80.3
Duzib128G0953 Durio zibethinus HOM05D004556 ORTHO05D005298 6.7e-136 487.6 301 81.4
Duzib106G0883 Durio zibethinus HOM05D004556 ORTHO05D005298 1.5e-135 486.5 301 80.4
Dinv11531 Davidia involucrata HOM05D004556 ORTHO05D005298 7.4e-135 484.2 301 81.1
COL.COLO4_15298 Corchorus olitorius HOM05D004556 ORTHO05D005298 6.2e-134 481.1 301 80.1
Gohir.D08G231400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 1.1e-133 480.3 301 79.4
VMungo0540G1874 Vigna mungo HOM05D004556 ORTHO05D005298 1.4e-133 479.9 300 80.3
GSVIVG01021835001 Vitis vinifera HOM05D004556 ORTHO05D005298 1.4e-133 479.9 301 80.1
Duzib177G0375 Durio zibethinus HOM05D004556 ORTHO05D005298 1.8e-133 479.6 317 77.6
Gohir.A08G214400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 1.8e-133 479.6 301 79.1
TAR365G0624 Trochodendron aralioides HOM05D004556 ORTHO05D005298 1.8e-133 479.6 300 79.0
Gorai.004G245800 Gossypium raimondii HOM05D004556 ORTHO05D005298 3.1e-133 478.8 301 79.1
Hund22124 Selenicereus undatus HOM05D004556 ORTHO05D005298 3.1e-133 478.8 301 79.1
Dinv17770 Davidia involucrata HOM05D004556 ORTHO05D005298 5.3e-133 478.0 300 79.7
Hma1.2p1_0083F.1_g042880 Hydrangea macrophylla HOM05D004556 ORTHO05D005298 9.0e-133 477.2 300 80.0
TWI56G0949 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 9.0e-133 477.2 300 79.7
Actinidia05768 Actinidia chinensis HOM05D004556 ORTHO05D005298 1.2e-132 476.9 300 80.3
Prupe.6G340800 Prunus persica HOM05D004556 ORTHO05D005298 2.6e-132 475.7 300 79.3
MD04G1221600 Malus domestica HOM05D004556 ORTHO05D005298 5.8e-132 474.6 300 79.7
PGSC0003DMG400022512 Solanum tuberosum HOM05D004556 ORTHO05D005298 5.8e-132 474.6 301 77.7
Glyma.03G245800 Glycine max HOM05D004556 ORTHO05D005298 7.6e-132 474.2 300 78.7
Phvul.006G100100 Phaseolus vulgaris HOM05D004556 ORTHO05D005298 9.9e-132 473.8 300 79.3
arahy.Tifrunner.gnm1.ann1.SCJ0TV Arachis hypogaea HOM05D004556 ORTHO05D005298 1.3e-131 473.4 300 78.7
Medtr7g114810 Medicago truncatula HOM05D004556 ORTHO05D005298 1.3e-131 473.4 300 79.3
Glyma.19G243300 Glycine max HOM05D004556 ORTHO05D005298 2.2e-131 472.6 300 79.0
TPR.G6984 Trifolium pratense HOM05D004556 ORTHO05D005298 2.2e-131 472.6 300 78.7
MD12G1237600 Malus domestica HOM05D004556 ORTHO05D005298 2.9e-131 472.2 300 79.3
Sed0015548 Sechium edule HOM05D004556 ORTHO05D005298 2.9e-131 472.2 300 77.0
CSS0028825 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 4.9e-131 471.5 300 79.0
Ca_09410_v3 Cicer arietinum L. HOM05D004556 ORTHO05D005298 4.9e-131 471.5 300 78.3
CSS0008105 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 8.4e-131 470.7 300 79.0
Gorai.007G284100 Gossypium raimondii HOM05D004556 ORTHO05D005298 8.4e-131 470.7 301 78.1
arahy.Tifrunner.gnm1.ann1.ZA55QJ Arachis hypogaea HOM05D004556 ORTHO05D005298 1.9e-130 469.5 300 78.0
ClCG02G016480 Citrullus lanatus HOM05D004556 ORTHO05D005298 1.9e-130 469.5 300 77.0
Potri.005G051300 Populus trichocarpa HOM05D004556 ORTHO05D005298 1.9e-130 469.5 300 77.0
Sopen01g041350 Solanum pennellii HOM05D004556 ORTHO05D005298 1.9e-130 469.5 301 76.7
Atru.chr2.783 Acer truncatum HOM05D004556 ORTHO05D005298 3.2e-130 468.8 300 77.0
Gohir.D11G264100 Gossypium hirsutum HOM05D004556 ORTHO05D005298 3.2e-130 468.8 301 77.7
Lalb_Chr18g0045051 Lupinus albus HOM05D004556 ORTHO05D005298 5.5e-130 468.0 300 78.3
CAN.G134.134 Capsicum annuum HOM05D004556 ORTHO05D005298 9.3e-130 467.2 301 76.1
Lj1g0006589 Lotus japonicus HOM05D004556 ORTHO05D005298 1.6e-129 466.5 300 78.3
Cc02_g31820 Coffea canephora HOM05D004556 ORTHO05D005298 2.1e-129 466.1 300 77.7
Peaxi162Scf01049g00037 Petunia axillaris HOM05D004556 ORTHO05D005298 2.1e-129 466.1 301 76.7
HPP92_025859 Vanilla planifolia HOM05D004556 ORTHO05D005298 2.1e-129 466.1 300 77.0
CsaV3_2G004290 Cucumis sativus L. HOM05D004556 ORTHO05D005298 3.5e-129 465.3 301 76.4
Nitab4.5_0005441g0010 Nicotiana tabacum HOM05D004556 ORTHO05D005298 3.5e-129 465.3 301 76.4
Sed0026396 Sechium edule HOM05D004556 ORTHO05D005298 3.5e-129 465.3 300 76.3
CiPaw.07G064700 Carya illinoinensis HOM05D004556 ORTHO05D005298 4.6e-129 464.9 300 77.0
Manes.09G154700 Manihot esculenta HOM05D004556 ORTHO05D005298 6.0e-129 464.5 300 77.3
Sabra13G0036200 Salix brachista HOM05D004556 ORTHO05D005298 6.0e-129 464.5 300 77.0
Ciclev10001991m.g Citrus clementina HOM05D004556 ORTHO05D005298 7.9e-129 464.2 299 77.6
FAN02G1055 Fragaria x ananassa HOM05D004556 ORTHO05D005298 7.9e-129 464.2 300 77.0
MBI11_g10323_MAGBIO Magnolia biondii HOM05D004556 ORTHO05D005298 7.9e-129 464.2 306 75.8
MELO3C004366.2 Cucumis melo HOM05D004556 ORTHO05D005298 1.0e-128 463.8 301 76.1
Lalb_Chr15g0076861 Lupinus albus HOM05D004556 ORTHO05D005298 1.3e-128 463.4 300 77.0
Potri.013G038700 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.3e-128 462.6 300 75.7
Sc09g0003820 Simmondsia chinensis HOM05D004556 ORTHO05D005298 2.3e-128 462.6 300 78.3
CANSAT54G0892 Cannabis sativa HOM05D004556 ORTHO05D005298 5.1e-128 461.5 300 77.0
DCAR_029537 Daucus carota HOM05D004556 ORTHO05D005298 2.5e-127 459.1 300 76.0
Eucgr.B01695 Eucalyptus grandis HOM05D004556 ORTHO05D005298 2.5e-127 459.1 300 75.7
RcHm_v2.0_Chr3g0451841 Rosa chinensis HOM05D004556 ORTHO05D005298 2.5e-127 459.1 300 76.3
THA.LOC104818641 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 2.5e-127 459.1 303 75.6
FAN05G0551 Fragaria x ananassa HOM05D004556 ORTHO05D005298 4.3e-127 458.4 299 76.3
ATR0665G084 Amborella trichopoda HOM05D004556 ORTHO05D005298 7.4e-127 457.6 300 75.0
AUR62034008 Chenopodium quinoa HOM05D004556 ORTHO05D005298 7.4e-127 457.6 299 74.9
FvH4_6g03340 Fragaria vesca HOM05D004556 ORTHO05D005298 7.4e-127 457.6 300 76.0
FAN14G0561 Fragaria x ananassa HOM05D004556 ORTHO05D005298 7.4e-127 457.6 299 76.3
PGR083G2383 Punica granatum HOM05D004556 ORTHO05D005298 7.4e-127 457.6 300 75.7
AUR62027473 Chenopodium quinoa HOM05D004556 ORTHO05D005298 9.6e-127 457.2 301 74.8
EL10Ac8g19247 Beta vulgaris HOM05D004556 ORTHO05D005298 1.6e-126 456.4 300 75.0
FAN05G3160 Fragaria x ananassa HOM05D004556 ORTHO05D005298 4.8e-126 454.9 296 76.4
MSTRG.5093 Avicennia marina HOM05D004556 ORTHO05D005298 8.2e-126 454.1 299 75.6
Rhsim05G0160800 Rhododendron simsii HOM05D004556 ORTHO05D005298 8.2e-126 454.1 300 76.7
AT3G04830 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 3.1e-125 452.2 302 75.2
BolC5t34901H Brassica oleracea HOM05D004556 ORTHO05D005298 2.0e-124 449.5 302 75.5
AL3G14990 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 2.6e-124 449.1 302 74.8
Thhalv10021217m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 2.6e-124 449.1 302 74.8
Cfa006453 Carpinus fangiana HOM05D004556 ORTHO05D005298 4.5e-124 448.4 300 74.7
BcaB04g19297 Brassica carinata HOM05D004556 ORTHO05D005298 5.8e-124 448.0 302 75.5
C05p62480 Brassica napus HOM05D004556 ORTHO05D005298 5.8e-124 448.0 302 75.8
A03p33860 Brassica napus HOM05D004556 ORTHO05D005298 7.6e-124 447.6 303 75.6
BraA03t12560Z Brassica rapa HOM05D004556 ORTHO05D005298 7.6e-124 447.6 303 75.6
HanXRQChr08g0230031 Helianthus annuus HOM05D004556 ORTHO05D005298 7.6e-124 447.6 300 76.0
BcaC01g04346 Brassica carinata HOM05D004556 ORTHO05D005298 1.0e-123 447.2 303 75.2
Cpa.g.sc117.71 Carica papaya HOM05D004556 ORTHO05D005298 1.3e-123 446.8 300 73.7
SGA_v2.0_scaffold43G16266 Striga asiatica HOM05D004556 ORTHO05D005298 1.7e-123 446.4 301 74.4
Lsat_1_v5_gn_1_96700 Lactuca sativa HOM05D004556 ORTHO05D005298 2.2e-123 446.0 301 75.1
BolC3t16405H Brassica oleracea HOM05D004556 ORTHO05D005298 8.4e-123 444.1 303 74.9
Carub.0003s0402 Capsella rubella HOM05D004556 ORTHO05D005298 8.4e-123 444.1 302 74.5
Sp3g03660 Schrenkiella parvula HOM05D004556 ORTHO05D005298 8.4e-123 444.1 302 74.8
SGA_v2.0_scaffold196G40974 Striga asiatica HOM05D004556 ORTHO05D005298 1.1e-122 443.7 300 73.7
CDE10G0245 Ceratophyllum demersum HOM05D004556 ORTHO05D005298 1.9e-122 443.0 299 73.6
C03p41170 Brassica napus HOM05D004556 ORTHO05D005298 2.5e-122 442.6 304 75.0
unitig_0.g2302 Utricularia gibba HOM05D004556 ORTHO05D005298 2.5e-122 442.6 299 71.6
vmacro21412 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 3.2e-122 442.2 320 70.6
BraA05t22977Z Brassica rapa HOM05D004556 ORTHO05D005298 7.1e-122 441.0 302 75.2
Ah.14g085270 Amaranthus hybridus HOM05D004556 ORTHO05D005298 2.7e-121 439.1 300 72.7
A05p42760 Brassica napus HOM05D004556 ORTHO05D005298 1.3e-120 436.8 302 74.2
ECA232G2012 Erigeron canadensis HOM05D004556 ORTHO05D005298 1.3e-120 436.8 299 73.9
SalBow4G3027 Salvia bowleyana HOM05D004556 ORTHO05D005298 1.3e-120 436.8 300 72.3
Nitab4.5_0005729g0050 Nicotiana tabacum HOM05D004556 ORTHO05D005298 1.5e-119 433.3 301 73.4
SEGI_22763 Sequoiadendron giganteum HOM05D004556 ORTHO05D005298 1.6e-118 429.9 299 68.9
Sabra05G0045300 Salix brachista HOM05D004556 ORTHO05D005298 2.8e-118 429.1 339 66.1
Aa31LG5G15220 Aethionema arabicum HOM05D004556 ORTHO05D005298 8.2e-118 427.6 317 69.7
Carub.0006s2567 Capsella rubella HOM05D004556 ORTHO05D005298 2.4e-117 426.0 304 70.4
AL6G40460 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 3.1e-117 425.6 304 70.1
Thhalv10004492m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 3.1e-117 425.6 304 71.1
AT5G28220 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 4.1e-117 425.2 302 71.2
SalBow4G2463 Salvia bowleyana HOM05D004556 ORTHO05D005298 5.0e-115 418.3 335 65.4
Os02g0127000 Oryza sativa ssp. japonica HOM05D004556 ORTHO05D005298 5.5e-114 414.8 297 68.4
Manes.08G132100 Manihot esculenta HOM05D004556 ORTHO05D005298 6.7e-112 407.9 249 79.9
Nn1g02409 Nelumbo nucifera HOM05D004556 ORTHO05D005298 1.9e-111 406.4 300 70.3
Dinv00306 Davidia involucrata HOM05D004556 ORTHO05D005298 4.3e-111 405.2 241 83.0
Solyc01g097740.3 Solanum lycopersicum HOM05D004556 ORTHO05D005298 2.2e-110 402.9 260 75.8
SHI18353 Sapria himalayana HOM05D004556 ORTHO05D005298 4.1e-109 398.7 340 60.6
Zm00001eb210860 Zea mays HOM05D004556 ORTHO05D005298 2.6e-108 396.0 291 67.0
Zm00001eb064390 Zea mays HOM05D004556 ORTHO05D005298 2.9e-107 392.5 287 66.9
Oeu045907.1 Olea europaea HOM05D004556 ORTHO05D005298 3.2e-106 389.0 309 66.7
TWI12G0865 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 1.6e-105 386.7 300 67.7
HanXRQChr11g0340961 Helianthus annuus HOM05D004556 ORTHO05D005298 1.1e-101 374.0 300 65.7
Pp3c22_11510 Physcomitrium patens HOM05D004556 ORTHO05D005298 3.1e-101 372.5 299 62.5
Mapoly0010s0190 Marchantia polymorpha HOM05D004556 ORTHO05D005298 4.2e-98 362.1 298 61.7
Psat3g008080 Pisum sativum HOM05D004556 ORTHO05D005298 2.0e-92 343.2 209 80.9
THA.LOC104821680 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 4.5e-92 342.0 209 78.9
Gohir.A11G254300 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.5e-90 336.3 301 60.8
SMO351G0459 Selaginella moellendorffii HOM05D004556 ORTHO05D005298 5.5e-90 335.1 289 56.7
vmacro21326 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 1.2e-89 334.0 508 41.9
CARHR079090 Cardamine hirsuta HOM05D004556 ORTHO05D005298 7.0e-85 318.2 218 73.9
Haze_04338 Corylus avellana HOM05D004556 ORTHO05D005298 6.5e-83 311.6 199 78.9
AagrBONN_evm.TU.Sc2ySwM_228.926 Anthoceros agrestis HOM05D004556 ORTHO05D005298 2.2e-78 296.6 246 58.5
Lj9C665G12 Lonicera japonica HOM05D004556 ORTHO05D005298 6.6e-75 285.0 243 65.4
CBR_g2743 Chara braunii HOM05D004556 ORTHO05D005298 1.8e-72 276.9 303 49.2
Rhsim05G0161200 Rhododendron simsii HOM05D004556 ORTHO05D005298 5.4e-69 265.4 242 60.7
Actinidia30934 Actinidia chinensis HOM05D004556 ORTHO05D005298 4.1e-61 239.2 154 78.6
PRCOL_00003723 Prasinoderma coloniale HOM05D004556 ORTHO05D005298 1.6e-52 210.7 276 42.8
Cre13.g579950 Chlamydomonas reinhardtii HOM05D004556 ORTHO05D005298 4.0e-48 196.1 298 37.2
TAR636G2079 Trochodendron aralioides HOM05D001851 ORTHO05D002237 4.1e-45 186.0 108 82.4
AagrBONN_evm.TU.Sc2ySwM_228.922 Anthoceros agrestis HOM05D004556 ORTHO05D005298 1.3e-43 181.0 148 58.8
Migut.O00800 Erythranthe guttata HOM05D004556 ORTHO05D005298 2.6e-39 166.8 101 80.2
Lj9C668G11 Lonicera japonica HOM05D004556 ORTHO05D005298 5.6e-34 149.1 196 49.5
Potri.013G038501 Populus trichocarpa HOM05D004556 ORTHO05D005298 8.4e-30 135.2 84 73.8
CARHR079080 Cardamine hirsuta HOM05D004556 ORTHO05D005298 1.0e-27 128.3 83 75.9
MCO08G289 Micromonas commoda HOM05D004556 ORTHO05D005298 2.4e-24 117.1 259 29.7
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 4.9e-22 109.4 156 41.7
Lj9C665T13 Lonicera japonica HOM05D004556 ORTHO05D005298 2.3e-19 100.5 70 70.0
AagrBONN_evm.TU.Sc2ySwM_228.821 Anthoceros agrestis HOM05D004556 ORTHO05D005298 8.7e-19 98.6 161 37.9
BolC3t16406H Brassica oleracea HOM05D004556 ORTHO05D005298 5.6e-18 95.9 82 62.2
HanXRQChr13g0394071 Helianthus annuus HOM05D004556 ORTHO05D005298 2.1e-17 94.0 63 71.4
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 1.1e-16 91.7 85 63.5
TPR.G31876 Trifolium pratense HOM05D004556 ORTHO05D005298 3.4e-15 86.7 77 62.3
RcHm_v2.0_Chr5g0051541 Rosa chinensis HOM05D004556 ORTHO05D005298 3.2e-13 80.1 121 40.5
RcHm_v2.0_Chr7g0229041 Rosa chinensis HOM05D004556 ORTHO05D005298 1.3e-06 58.2 40 67.5
Sp1g08890 Schrenkiella parvula HOM05D000111 ORTHO05D013786 8.4e-06 55.5 62 56.5


User provided reference genes

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