Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7535 Papaver somniferum HOM05D004411 ORTHO05D005569 5.5e-204 714.1 380 100.0
PSO210G6597 Papaver somniferum HOM05D004411 ORTHO05D005569 2.8e-184 648.7 388 91.0
TAR627G0926 Trochodendron aralioides HOM05D004411 ORTHO05D005569 2.1e-102 376.7 403 54.6
TAR624G0740 Trochodendron aralioides HOM05D004411 ORTHO05D005569 4.5e-89 332.4 350 57.7
GSVIVG01008286001 Vitis vinifera HOM05D004411 ORTHO05D005569 4.5e-89 332.4 397 51.9
CSS0013783 Camellia sinensis var. sinensis HOM05D004411 ORTHO05D005569 1.9e-87 327.0 396 53.5
Dinv22283 Davidia involucrata HOM05D004411 ORTHO05D005569 2.1e-86 323.6 393 50.9
Hma1.2p1_0938F.1_g239200 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 5.2e-85 318.9 390 51.0
PSO210G0554 Papaver somniferum HOM05D004411 ORTHO05D005569 6.3e-83 312.0 294 63.9
Ciclev10008629m.g Citrus clementina HOM05D004411 ORTHO05D005569 8.2e-83 311.6 399 49.6
Migut.H01843 Erythranthe guttata HOM05D004411 ORTHO05D005569 1.4e-82 310.8 398 48.2
Dinv40733 Davidia involucrata HOM05D004411 ORTHO05D005569 5.3e-82 308.9 351 54.7
QL08p012116 Quercus lobata HOM05D004411 ORTHO05D005569 1.2e-81 307.8 417 48.4
QL08p011929 Quercus lobata HOM05D004411 ORTHO05D005569 2.0e-81 307.0 417 48.4
Atru.chr2.3274 Acer truncatum HOM05D004411 ORTHO05D005569 3.5e-81 306.2 422 45.5
Potri.011G136400 Populus trichocarpa HOM05D004411 ORTHO05D005569 3.5e-81 306.2 385 48.6
Prupe.4G208500 Prunus persica HOM05D004411 ORTHO05D005569 3.5e-81 306.2 392 50.0
CAN.G337.104 Capsicum annuum HOM05D004411 ORTHO05D005569 2.9e-80 303.1 385 46.2
CiPaw.05G090700 Carya illinoinensis HOM05D004411 ORTHO05D005569 1.1e-79 301.2 391 49.1
RcHm_v2.0_Chr5g0037971 Rosa chinensis HOM05D004411 ORTHO05D005569 2.5e-79 300.1 388 49.2
Solyc07g064300.3 Solanum lycopersicum HOM05D004411 ORTHO05D005569 3.2e-79 299.7 392 46.2
Actinidia35328 Actinidia chinensis HOM05D004411 ORTHO05D005569 1.2e-78 297.7 393 48.1
Rhsim04G0001700 Rhododendron simsii HOM05D004411 ORTHO05D005569 1.5e-76 290.8 391 49.6
CANSAT56G2724 Cannabis sativa HOM05D004411 ORTHO05D005569 2.6e-76 290.0 402 45.5
TWI38G0098 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 4.4e-76 289.3 406 45.8
Cc02_g24710 Coffea canephora HOM05D004411 ORTHO05D005569 5.7e-76 288.9 391 46.3
PGR083G2632 Punica granatum HOM05D004411 ORTHO05D005569 5.7e-76 288.9 393 46.8
Eucgr.E01365 Eucalyptus grandis HOM05D004411 ORTHO05D005569 2.8e-75 286.6 394 46.4
Thecc.07G044400 Theobroma cacao HOM05D004411 ORTHO05D005569 3.7e-75 286.2 407 45.9
vmacro09736 Vaccinium macrocarpon HOM05D004411 ORTHO05D005569 4.8e-75 285.8 388 48.2
Peaxi162Scf00450g00868 Petunia axillaris HOM05D004411 ORTHO05D005569 6.3e-75 285.4 408 44.9
MSTRG.12964 Avicennia marina HOM05D004411 ORTHO05D005569 1.1e-74 284.6 410 46.1
FvH4_3g22120 Fragaria vesca HOM05D004411 ORTHO05D005569 1.8e-74 283.9 389 47.8
Oeu021397.1 Olea europaea HOM05D004411 ORTHO05D005569 1.8e-74 283.9 357 49.0
PSO339G6638 Papaver somniferum HOM05D004411 ORTHO05D005569 3.1e-74 283.1 228 72.4
Sed0027425 Sechium edule HOM05D004411 ORTHO05D005569 7.0e-74 282.0 384 46.1
Hund07317 Selenicereus undatus HOM05D004411 ORTHO05D005569 7.0e-74 282.0 411 44.0
Nitab4.5_0009551g0010 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.2e-73 281.2 413 42.9
MD11G1222400 Malus domestica HOM05D004411 ORTHO05D005569 2.7e-73 280.0 356 49.4
ECA236G1785 Erigeron canadensis HOM05D004411 ORTHO05D005569 3.5e-73 279.6 389 47.8
HanXRQChr11g0336281 Helianthus annuus HOM05D004411 ORTHO05D005569 3.5e-73 279.6 387 45.7
Duzib213G0043 Durio zibethinus HOM05D004411 ORTHO05D005569 7.7e-73 278.5 395 46.6
Rhsim04G0000600 Rhododendron simsii HOM05D004411 ORTHO05D005569 1.0e-72 278.1 406 46.1
Aqoxy3G00168 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 5.0e-72 275.8 396 45.5
SalBow7G1998 Salvia bowleyana HOM05D004411 ORTHO05D005569 5.0e-72 275.8 409 44.3
ClCG10G005570 Citrullus lanatus HOM05D004411 ORTHO05D005569 1.5e-71 274.2 392 43.9
MELO3C003591.2 Cucumis melo HOM05D004411 ORTHO05D005569 1.5e-71 274.2 403 43.9
Sabra11G0122500 Salix brachista HOM05D004411 ORTHO05D005569 1.5e-71 274.2 426 43.9
Lsat_1_v5_gn_7_109101 Lactuca sativa HOM05D004411 ORTHO05D005569 5.5e-71 272.3 345 49.3
RcHm_v2.0_Chr1g0330851 Rosa chinensis HOM05D004411 ORTHO05D005569 5.5e-71 272.3 218 65.6
SGA_v2.0_scaffold9G05058 Striga asiatica HOM05D004411 ORTHO05D005569 7.2e-71 271.9 438 42.2
Gorai.002G085400 Gossypium raimondii HOM05D004411 ORTHO05D005569 6.1e-70 268.9 406 44.3
Medtr3g019330 Medicago truncatula HOM05D004411 ORTHO05D005569 8.0e-70 268.5 411 44.3
Gohir.D01G064500 Gossypium hirsutum HOM05D004411 ORTHO05D005569 1.0e-69 268.1 397 44.3
Ca_05663_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 1.4e-69 267.7 409 42.8
Ca_24447_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 1.4e-69 267.7 409 42.3
CsaV3_3G017510 Cucumis sativus L. HOM05D004411 ORTHO05D005569 2.3e-69 266.9 393 43.3
Sc06g0005160 Simmondsia chinensis HOM05D004411 ORTHO05D005569 2.3e-69 266.9 337 48.7
Gohir.A01G077000 Gossypium hirsutum HOM05D004411 ORTHO05D005569 1.2e-68 264.6 406 42.6
TWI38G2195 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 4.4e-68 262.7 243 58.4
Atru.chr7.1306 Acer truncatum HOM05D004411 ORTHO05D005569 1.7e-67 260.8 270 54.4
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.7e-67 259.6 397 44.8
EL10Ac9g22002 Beta vulgaris HOM05D004411 ORTHO05D005569 8.3e-67 258.5 398 45.5
Oeu005458.1 Olea europaea HOM05D004411 ORTHO05D005569 1.6e-65 254.2 416 42.5
Glyma.08G313000 Glycine max HOM05D004411 ORTHO05D005569 5.9e-65 252.3 345 43.8
CiPaw.11G186800 Carya illinoinensis HOM05D004411 ORTHO05D005569 1.0e-64 251.5 215 64.7
Psat5g216880 Pisum sativum HOM05D004411 ORTHO05D005569 1.0e-64 251.5 380 45.3
Lj6g0013350 Lotus japonicus HOM05D004411 ORTHO05D005569 1.3e-64 251.1 362 44.8
THA.LOC104798777 Tarenaya hassleriana HOM05D004411 ORTHO05D005569 2.9e-64 250.0 390 42.3
AUR62000402 Chenopodium quinoa HOM05D004411 ORTHO05D005569 3.9e-64 249.6 355 46.2
Aqoxy7G03937 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 5.0e-64 249.2 397 41.3
Lalb_Chr18g0049751 Lupinus albus HOM05D004411 ORTHO05D005569 5.0e-64 249.2 365 43.8
Glyma.08G318600 Glycine max HOM05D004411 ORTHO05D005569 6.1e-62 242.3 271 50.9
unitig_0.g2388 Utricularia gibba HOM05D004411 ORTHO05D005569 8.0e-62 241.9 369 43.1
CDE07G0547 Ceratophyllum demersum HOM05D004411 ORTHO05D005569 1.8e-61 240.7 369 46.1
TPR.G3855 Trifolium pratense HOM05D004411 ORTHO05D005569 6.8e-61 238.8 439 41.7
Phvul.006G038300 Phaseolus vulgaris HOM05D004411 ORTHO05D005569 2.6e-60 236.9 354 45.5
arahy.Tifrunner.gnm1.ann1.01DGNM Arachis hypogaea HOM05D004411 ORTHO05D005569 7.5e-60 235.3 259 50.2
DCAR_008678 Daucus carota HOM05D004411 ORTHO05D005569 7.5e-60 235.3 349 45.3
Lj2g0018498 Lotus japonicus HOM05D004411 ORTHO05D005569 4.9e-59 232.6 357 43.4
Nn1g07099 Nelumbo nucifera HOM05D004411 ORTHO05D005569 2.4e-58 230.3 185 66.5
ATR0564G530 Amborella trichopoda HOM05D004411 ORTHO05D005569 9.2e-58 228.4 355 43.7
CARHR040960 Cardamine hirsuta HOM05D004411 ORTHO05D005569 2.0e-57 227.3 365 41.4
Medtr4g088440 Medicago truncatula HOM05D004411 ORTHO05D005569 2.0e-57 227.3 254 50.4
HPP92_013625 Vanilla planifolia HOM05D004411 ORTHO05D005569 7.8e-57 225.3 393 41.7
arahy.Tifrunner.gnm1.ann1.7KL5HB Arachis hypogaea HOM05D004411 ORTHO05D005569 2.3e-56 223.8 364 40.7
Thhalv10011488m.g Eutrema salsugineum HOM05D004411 ORTHO05D005569 1.5e-55 221.1 442 37.6
Aa31LG10G3320 Aethionema arabicum HOM05D004411 ORTHO05D005569 2.5e-55 220.3 391 38.4
PGSC0003DMG402013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 2.5e-55 220.3 392 37.8
Carub.0001s3986 Capsella rubella HOM05D004411 ORTHO05D005569 4.3e-55 219.5 441 37.2
FAN21G4008 Fragaria x ananassa HOM05D004411 ORTHO05D005569 9.5e-55 218.4 401 39.9
AT1G50910 Arabidopsis thaliana HOM05D004411 ORTHO05D005569 2.1e-54 217.2 336 42.6
AL1G58640 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 1.1e-53 214.9 344 41.3
Zm00001eb317630 Zea mays HOM05D004411 ORTHO05D005569 7.5e-52 208.8 264 45.1
Zm00001eb253190 Zea mays HOM05D004411 ORTHO05D005569 2.9e-51 206.8 238 47.5
Sp1g37650 Schrenkiella parvula HOM05D004411 ORTHO05D005569 4.9e-51 206.1 364 39.3
SHI31835 Sapria himalayana HOM05D004411 ORTHO05D005569 1.4e-50 204.5 248 50.0
SEGI_26616 Sequoiadendron giganteum HOM05D004411 ORTHO05D005569 2.4e-50 203.8 418 36.4
AUR62006758 Chenopodium quinoa HOM05D004411 ORTHO05D005569 9.2e-50 201.8 409 38.1
Os09g0504900 Oryza sativa ssp. japonica HOM05D004411 ORTHO05D005569 2.1e-49 200.7 350 41.1
Cpa.g.sc12.166 Carica papaya HOM05D004411 ORTHO05D005569 6.0e-49 199.1 389 35.7
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.3e-48 198.0 433 35.8
Lalb_Chr15g0080391 Lupinus albus HOM05D004411 ORTHO05D005569 5.1e-48 196.1 185 55.1
Nitab4.5_0000397g0320 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.5e-47 194.5 426 35.0
BcaB07g33532 Brassica carinata HOM05D004411 ORTHO05D005569 9.5e-47 191.8 247 46.6
BcaC08g43264 Brassica carinata HOM05D004411 ORTHO05D005569 9.5e-47 191.8 247 45.7
C06p06080 Brassica napus HOM05D004411 ORTHO05D005569 9.5e-47 191.8 247 45.7
BolC6t35721H Brassica oleracea HOM05D004411 ORTHO05D005569 9.5e-47 191.8 247 45.7
BraA06t23489Z Brassica rapa HOM05D004411 ORTHO05D005569 9.5e-47 191.8 247 47.0
AL2G19790 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 1.5e-44 184.5 183 55.7
A06p02820 Brassica napus HOM05D004411 ORTHO05D005569 1.5e-44 184.5 338 39.3
PSO210G2328 Papaver somniferum HOM05D004411 ORTHO05D005569 4.4e-44 183.0 110 88.2
AL8G37460 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 1.3e-43 181.4 363 36.6
Manes.03G127300 Manihot esculenta HOM05D004411 ORTHO05D005569 2.2e-43 180.6 377 34.5
Nitab4.5_0000622g0210 Nicotiana tabacum HOM05D004411 ORTHO05D005569 3.5e-41 173.3 185 54.1
BolC5t32046H Brassica oleracea HOM05D004411 ORTHO05D005569 6.0e-41 172.6 301 39.2
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.7e-40 171.0 397 35.0
BcaB06g26197 Brassica carinata HOM05D004411 ORTHO05D005569 2.5e-39 167.2 262 42.0
Sopen07g032450 Solanum pennellii HOM05D004411 ORTHO05D005569 5.6e-39 166.0 291 38.8
BcaB02g11193 Brassica carinata HOM05D004411 ORTHO05D005569 8.1e-38 162.2 255 41.2
COL.COLO4_09627 Corchorus olitorius HOM05D004411 ORTHO05D005569 6.8e-37 159.1 289 38.4
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.2e-36 158.3 384 34.1
C05p33200 Brassica napus HOM05D004411 ORTHO05D005569 1.3e-35 154.8 277 38.6
Ah.06g195930 Amaranthus hybridus HOM05D004411 ORTHO05D005569 1.7e-35 154.5 281 38.1
PGSC0003DMG401013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 3.3e-31 140.2 206 39.3
MD03G1208200 Malus domestica HOM05D004411 ORTHO05D005569 7.3e-31 139.0 355 33.0
ECA236G1239 Erigeron canadensis HOM05D004411 ORTHO05D005569 1.1e-29 135.2 256 39.8
DCAR_011015 Daucus carota HOM05D004411 ORTHO05D005569 1.4e-26 124.8 127 54.3
Glyma.09G101400 Glycine max HOM05D004411 ORTHO05D005569 2.1e-25 120.9 212 37.3
VMungo1383G2244 Vigna mungo HOM05D004411 ORTHO05D005569 7.8e-25 119.0 121 53.7
Pp3c25_11530 Physcomitrium patens HOM05D004411 ORTHO05D005569 1.0e-24 118.6 217 36.4
VMungo0540G0671 Vigna mungo HOM05D004411 ORTHO05D005569 2.8e-22 110.5 214 36.9
VMungo1383G3213 Vigna mungo HOM05D004411 ORTHO05D005569 2.8e-22 110.5 118 49.2
Hma1.2p1_3713F.1_g337350 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 9.9e-20 102.1 85 63.5
Cc00_g16970 Coffea canephora HOM05D004411 ORTHO05D005569 2.2e-19 100.9 90 58.9
Cc09_g02490 Coffea canephora HOM05D004411 ORTHO05D005569 1.4e-18 98.2 97 56.7
A05p19860 Brassica napus HOM05D004411 ORTHO05D005569 1.3e-16 91.7 124 44.4
BraA05t20891Z Brassica rapa HOM05D004411 ORTHO05D005569 1.3e-16 91.7 124 44.4
Cc02_g22100 Coffea canephora HOM05D004411 ORTHO05D005569 1.1e-15 88.6 118 49.2
Mapoly0160s0028 Marchantia polymorpha HOM05D004411 ORTHO05D005569 3.3e-15 87.0 217 29.0
EL10Ac9g22233 Beta vulgaris HOM05D004411 ORTHO05D005569 4.3e-15 86.7 249 32.9
SMO367G0149 Selaginella moellendorffii HOM05D004411 ORTHO05D005569 2.1e-14 84.3 375 24.3
Oeu034511.1 Olea europaea HOM05D004411 ORTHO05D005569 3.7e-14 83.6 81 51.9
Haze_07158 Corylus avellana HOM05D004411 ORTHO05D005569 5.8e-12 76.3 83 48.2
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 7.6e-12 75.9 86 47.7
Glyma.09G101500 Glycine max HOM05D004411 ORTHO05D005569 1.3e-11 75.1 84 46.4
AagrBONN_evm.TU.Sc2ySwM_344.3992 Anthoceros agrestis HOM05D004411 ORTHO05D005569 4.9e-11 73.2 336 26.2
PGSC0003DMG400013925 Solanum tuberosum HOM05D004411 ORTHO05D005569 2.1e-09 67.8 49 65.3
GSVIVG01036883001 Vitis vinifera HOM05D004411 ORTHO05D005569 5.1e-08 63.2 55 54.5
CBR_g6715 Chara braunii HOM05D004411 ORTHO05D005569 2.1e-06 57.8 146 30.8
Lalb_Chr15g0080381 Lupinus albus HOM05D004411 ORTHO05D005569 6.2e-06 56.2 96 31.2


User provided reference genes

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